RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 NEXNQ0ZGT2 675 aa18.99■□□□□ 0.63
MBD1-203ENST00000339998 NHSL1Q5SYE7 1610 aa18.99■□□□□ 0.63
MBD1-203ENST00000339998 A0A0G2JS52 829 aa18.98■□□□□ 0.63
MBD1-203ENST00000339998 NUTM2BA6NNL0 878 aaPredicted RBP18.98■□□□□ 0.63
MBD1-203ENST00000339998 NUTM2EB1AL46 878 aaPredicted RBP18.98■□□□□ 0.63
MBD1-203ENST00000339998 NUTM2AQ8IVF1 878 aaPredicted RBP18.98■□□□□ 0.63
MBD1-203ENST00000339998 SYTL4Q96C24 671 aaPredicted RBP18.98■□□□□ 0.63
MBD1-203ENST00000339998 KIF1BPQ96EK5 621 aa18.98■□□□□ 0.63
MBD1-203ENST00000339998 ARXQ96QS3 562 aa18.98■□□□□ 0.63
MBD1-203ENST00000339998 ABCC6O95255 1503 aa18.97■□□□□ 0.63
MBD1-203ENST00000339998 PI4K2BQ8TCG2 481 aa18.96■□□□□ 0.63
MBD1-203ENST00000339998 PIGBQ92521 554 aa18.96■□□□□ 0.63
MBD1-203ENST00000339998 ROBO1Q9Y6N7 1651 aa18.96■□□□□ 0.63
MBD1-203ENST00000339998 ERVV-2B6SEH9 535 aa18.96■□□□□ 0.63
MBD1-203ENST00000339998 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
MBD1-203ENST00000339998 RAB11FIP3O75154 756 aa18.96■□□□□ 0.63
MBD1-203ENST00000339998 SASH1O94885 1247 aa18.96■□□□□ 0.63
MBD1-203ENST00000339998 TMOD3Q9NYL9 352 aa18.96■□□□□ 0.63
MBD1-203ENST00000339998 STAP2Q9UGK3 403 aa18.96■□□□□ 0.63
MBD1-203ENST00000339998 GLI3P10071 1580 aa18.95■□□□□ 0.62
MBD1-203ENST00000339998 CHMLP26374 656 aa18.95■□□□□ 0.62
MBD1-203ENST00000339998 NKX1-1Q15270 411 aaPredicted RBP18.95■□□□□ 0.62
MBD1-203ENST00000339998 TLR7Q9NYK1 1049 aaKnown RBP18.95■□□□□ 0.62
MBD1-203ENST00000339998 PARP4Q9UKK3 1724 aaKnown RBP18.95■□□□□ 0.62
MBD1-203ENST00000339998 A0A087WZG4 1122 aa18.95■□□□□ 0.62
MBD1-203ENST00000339998 MTX1Q13505 466 aa18.95■□□□□ 0.62
MBD1-203ENST00000339998 CASC1Q6TDU7 716 aa18.95■□□□□ 0.62
MBD1-203ENST00000339998 SHANK3Q9BYB0 1731 aa18.95■□□□□ 0.62
MBD1-203ENST00000339998 ERC2O15083 957 aa18.94■□□□□ 0.62
MBD1-203ENST00000339998 DNAJC10Q8IXB1 793 aa18.93■□□□□ 0.62
MBD1-203ENST00000339998 AACSQ86V21 672 aa18.93■□□□□ 0.62
MBD1-203ENST00000339998 ESYT1Q9BSJ8 1104 aa18.93■□□□□ 0.62
MBD1-203ENST00000339998 ANO2Q9NQ90 1003 aa18.93■□□□□ 0.62
MBD1-203ENST00000339998 PALD1Q9ULE6 856 aa18.93■□□□□ 0.62
MBD1-203ENST00000339998 EAF2Q96CJ1 260 aaPredicted RBP18.93■□□□□ 0.62
MBD1-203ENST00000339998 CCDC9Q9Y3X0 531 aaKnown RBP18.93■□□□□ 0.62
MBD1-203ENST00000339998 UTYO14607 1347 aa18.93■□□□□ 0.62
MBD1-203ENST00000339998 CHMP3Q9Y3E7 222 aa18.92■□□□□ 0.62
MBD1-203ENST00000339998 CLASRPQ8N2M8 674 aaKnown RBP18.91■□□□□ 0.62
MBD1-203ENST00000339998 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
MBD1-203ENST00000339998 KCPQ6ZWJ8 1503 aa18.91■□□□□ 0.62
MBD1-203ENST00000339998 TOGARAM1Q9Y4F4 1720 aa18.91■□□□□ 0.62
MBD1-203ENST00000339998 SNX21Q969T3 373 aa18.9■□□□□ 0.62
MBD1-203ENST00000339998 ATG3Q9NT62 314 aa18.9■□□□□ 0.62
MBD1-203ENST00000339998 NDUFB9Q9Y6M9 179 aa18.9■□□□□ 0.62
MBD1-203ENST00000339998 G3BP1Q13283 466 aaKnown RBP eCLIP18.9■□□□□ 0.62
MBD1-203ENST00000339998 SLC4A9Q96Q91 983 aa18.9■□□□□ 0.62
MBD1-203ENST00000339998 TUBGCP6Q96RT7 1819 aa18.89■□□□□ 0.62
MBD1-203ENST00000339998 REC8O95072 547 aa18.89■□□□□ 0.61
MBD1-203ENST00000339998 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
MBD1-203ENST00000339998 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
MBD1-203ENST00000339998 CCDC85AQ96PX6 553 aaPredicted RBP18.89■□□□□ 0.61
MBD1-203ENST00000339998 CWC27Q6UX04 472 aaKnown RBP18.89■□□□□ 0.61
MBD1-203ENST00000339998 NOL8Q76FK4 1167 aaKnown RBP18.89■□□□□ 0.61
MBD1-203ENST00000339998 LMBR1LQ6UX01 489 aa18.88■□□□□ 0.61
MBD1-203ENST00000339998 K7ELQ4 463 aaPredicted RBP18.88■□□□□ 0.61
MBD1-203ENST00000339998 HSP90AB4PQ58FF6 505 aa18.88■□□□□ 0.61
MBD1-203ENST00000339998 ACSBG1Q96GR2 724 aa18.88■□□□□ 0.61
MBD1-203ENST00000339998 EDC3Q96F86 508 aaKnown RBP18.87■□□□□ 0.61
MBD1-203ENST00000339998 AFDNP55196 1824 aaKnown RBP18.87■□□□□ 0.61
MBD1-203ENST00000339998 MYT1Q01538 1121 aa18.87■□□□□ 0.61
MBD1-203ENST00000339998 SYNE4Q8N205 404 aa18.87■□□□□ 0.61
MBD1-203ENST00000339998 EXOC5O00471 708 aa18.87■□□□□ 0.61
MBD1-203ENST00000339998 PRIM1P49642 420 aaKnown RBP18.87■□□□□ 0.61
MBD1-203ENST00000339998 ARFGEF2Q9Y6D5 1785 aa18.86■□□□□ 0.61
MBD1-203ENST00000339998 CASP7P55210 303 aa18.86■□□□□ 0.61
MBD1-203ENST00000339998 PTPN12Q05209 780 aaKnown RBP18.86■□□□□ 0.61
MBD1-203ENST00000339998 BOLA2Q9H3K6 86 aa18.86■□□□□ 0.61
MBD1-203ENST00000339998 ZNF594Q96JF6 807 aaPredicted RBP18.86■□□□□ 0.61
MBD1-203ENST00000339998 RFX5P48382 616 aaPredicted RBP18.85■□□□□ 0.61
MBD1-203ENST00000339998 ECHDC1Q9NTX5 307 aa18.85■□□□□ 0.61
MBD1-203ENST00000339998 CHGBP05060 677 aa18.85■□□□□ 0.61
MBD1-203ENST00000339998 TFCP2Q12800 502 aa18.85■□□□□ 0.61
MBD1-203ENST00000339998 UPF3BQ9BZI7 483 aaKnown RBP18.85■□□□□ 0.61
MBD1-203ENST00000339998 AK9Q5TCS8 1911 aa18.85■□□□□ 0.61
MBD1-203ENST00000339998 RABEP1Q15276 862 aa18.84■□□□□ 0.61
MBD1-203ENST00000339998 CHMP5Q9NZZ3 219 aa18.84■□□□□ 0.61
MBD1-203ENST00000339998 COL16A1Q07092 1604 aaPredicted RBP18.84■□□□□ 0.61
MBD1-203ENST00000339998 UBR2Q8IWV8 1755 aa18.83■□□□□ 0.61
MBD1-203ENST00000339998 GPTP24298 496 aa18.83■□□□□ 0.61
MBD1-203ENST00000339998 NEK4P51957 841 aa18.83■□□□□ 0.61
MBD1-203ENST00000339998 FOXO4P98177 505 aa18.83■□□□□ 0.61
MBD1-203ENST00000339998 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.6
MBD1-203ENST00000339998 TNS2Q63HR2 1409 aa18.83■□□□□ 0.6
MBD1-203ENST00000339998 LTBP4Q8N2S1 1624 aa18.83■□□□□ 0.6
MBD1-203ENST00000339998 GLRX3O76003 335 aaKnown RBP18.83■□□□□ 0.6
MBD1-203ENST00000339998 CNTROBQ8N137 903 aa18.83■□□□□ 0.6
MBD1-203ENST00000339998 CWC25Q9NXE8 425 aaPredicted RBP18.83■□□□□ 0.6
MBD1-203ENST00000339998 DDIT3P35638 169 aa18.82■□□□□ 0.6
MBD1-203ENST00000339998 HLFQ16534 295 aa18.82■□□□□ 0.6
MBD1-203ENST00000339998 FAM89AQ96GI7 184 aa18.82■□□□□ 0.6
MBD1-203ENST00000339998 HDAC5Q9UQL6 1122 aa18.82■□□□□ 0.6
MBD1-203ENST00000339998 LAMB4A4D0S4 1761 aa18.82■□□□□ 0.6
MBD1-203ENST00000339998 DTNBO60941 627 aa18.82■□□□□ 0.6
MBD1-203ENST00000339998 ZGPATQ8N5A5 531 aaKnown RBP18.82■□□□□ 0.6
MBD1-203ENST00000339998 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
MBD1-203ENST00000339998 AOX1Q06278 1338 aa18.82■□□□□ 0.6
MBD1-203ENST00000339998 DISP2A7MBM2 1401 aa18.82■□□□□ 0.6
MBD1-203ENST00000339998 H7C1W4 665 aa18.81■□□□□ 0.6
MBD1-203ENST00000339998 ERC1Q8IUD2 1116 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms