RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 ZNF454Q8N9F8 522 aa8.06□□□□□ -1.12
ZNF28-201ENST00000339844 ZCRB1Q8TBF4 217 aaKnown RBP8.06□□□□□ -1.12
ZNF28-201ENST00000339844 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
ZNF28-201ENST00000339844 KHSRPQ92945 711 aaKnown RBP eCLIP8.06□□□□□ -1.12
ZNF28-201ENST00000339844 FBXW7Q969H0 707 aa8.06□□□□□ -1.12
ZNF28-201ENST00000339844 BCL9O00512 1426 aa8.05□□□□□ -1.12
ZNF28-201ENST00000339844 CYP27B1O15528 508 aa8.05□□□□□ -1.12
ZNF28-201ENST00000339844 KCNQ2O43526 872 aa8.05□□□□□ -1.12
ZNF28-201ENST00000339844 HMOX1P09601 288 aa8.05□□□□□ -1.12
ZNF28-201ENST00000339844 BECN1Q14457 450 aa8.05□□□□□ -1.12
ZNF28-201ENST00000339844 ACSBG1Q96GR2 724 aa8.05□□□□□ -1.12
ZNF28-201ENST00000339844 KDRP35968 1356 aa8.05□□□□□ -1.12
ZNF28-201ENST00000339844 TNS1Q9HBL0 1735 aaKnown RBP8.04□□□□□ -1.12
ZNF28-201ENST00000339844 APAF1O14727 1248 aa8.04□□□□□ -1.12
ZNF28-201ENST00000339844 U2SURPO15042 1029 aaKnown RBP8.04□□□□□ -1.12
ZNF28-201ENST00000339844 ZMYND10O75800 440 aa8.04□□□□□ -1.12
ZNF28-201ENST00000339844 FCHSD2O94868 740 aa8.04□□□□□ -1.12
ZNF28-201ENST00000339844 C20orf194Q5TEA3 1177 aa8.04□□□□□ -1.12
ZNF28-201ENST00000339844 GPR153Q6NV75 609 aa8.04□□□□□ -1.12
ZNF28-201ENST00000339844 CCDC125Q86Z20 511 aa8.04□□□□□ -1.12
ZNF28-201ENST00000339844 PCDH11XQ9BZA7 1347 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 PCDH11YQ9BZA8 1340 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 PKD1L3Q7Z443 1732 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 SBF2Q86WG5 1849 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 PSDA5PKW4 1024 aaPredicted RBP8.03□□□□□ -1.12
ZNF28-201ENST00000339844 EN1Q05925 392 aaPredicted RBP8.03□□□□□ -1.12
ZNF28-201ENST00000339844 SPNS2Q8IVW8 549 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 RUNDC1Q96C34 613 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 CFAP53Q96M91 514 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 SLC24A3Q9HC58 644 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 PCDHGA10Q9Y5H3 936 aa8.03□□□□□ -1.12
ZNF28-201ENST00000339844 ST18O60284 1047 aa8.02□□□□□ -1.13
ZNF28-201ENST00000339844 APBA3O96018 575 aa8.02□□□□□ -1.13
ZNF28-201ENST00000339844 PHKG2P15735 406 aa8.02□□□□□ -1.13
ZNF28-201ENST00000339844 SF3B2Q13435 895 aaKnown RBP8.02□□□□□ -1.13
ZNF28-201ENST00000339844 EZH2Q15910 746 aaKnown RBP8.02□□□□□ -1.13
ZNF28-201ENST00000339844 PPP4R3BQ5MIZ7 849 aa8.02□□□□□ -1.13
ZNF28-201ENST00000339844 WWC1Q8IX03 1113 aa8.02□□□□□ -1.13
ZNF28-201ENST00000339844 CLUAP1Q96AJ1 413 aa8.02□□□□□ -1.13
ZNF28-201ENST00000339844 SPG7Q9UQ90 795 aa8.02□□□□□ -1.13
ZNF28-201ENST00000339844 LAS1LQ9Y4W2 734 aaKnown RBP8.02□□□□□ -1.13
ZNF28-201ENST00000339844 KAT6BQ8WYB5 2073 aa8.01□□□□□ -1.13
ZNF28-201ENST00000339844 U2AF1L5P0DN76 240 aaPredicted RBP8.01□□□□□ -1.13
ZNF28-201ENST00000339844 BAG6P46379 1132 aa8.01□□□□□ -1.13
ZNF28-201ENST00000339844 PRIM1P49642 420 aaKnown RBP8.01□□□□□ -1.13
ZNF28-201ENST00000339844 FOSBP53539 338 aa8.01□□□□□ -1.13
ZNF28-201ENST00000339844 U2AF1Q01081 240 aaKnown RBP eCLIP8.01□□□□□ -1.13
ZNF28-201ENST00000339844 PLEKHO1Q53GL0 409 aaPredicted RBP8.01□□□□□ -1.13
ZNF28-201ENST00000339844 ZNF530Q6P9A1 599 aaPredicted RBP8.01□□□□□ -1.13
ZNF28-201ENST00000339844 CAMKK2Q96RR4 588 aa8.01□□□□□ -1.13
ZNF28-201ENST00000339844 RSPH6AQ9H0K4 717 aa8.01□□□□□ -1.13
ZNF28-201ENST00000339844 RWDD1Q9H446 243 aaPredicted RBP8.01□□□□□ -1.13
ZNF28-201ENST00000339844 LHX6Q9UPM6 363 aa8.01□□□□□ -1.13
ZNF28-201ENST00000339844 NHSQ6T4R5 1651 aa8.01□□□□□ -1.13
ZNF28-201ENST00000339844 DOT1LQ8TEK3 1739 aa8□□□□□ -1.13
ZNF28-201ENST00000339844 TOGARAM1Q9Y4F4 1720 aa8□□□□□ -1.13
ZNF28-201ENST00000339844 PLEKHG2Q9H7P9 1386 aa8□□□□□ -1.13
ZNF28-201ENST00000339844 HOXB1P14653 301 aaPredicted RBP8□□□□□ -1.13
ZNF28-201ENST00000339844 PRKAR2BP31323 418 aa8□□□□□ -1.13
ZNF28-201ENST00000339844 HIC1Q14526 733 aa8□□□□□ -1.13
ZNF28-201ENST00000339844 MTHFSDQ2M296 383 aaKnown RBP8□□□□□ -1.13
ZNF28-201ENST00000339844 AMOTQ4VCS5 1084 aa8□□□□□ -1.13
ZNF28-201ENST00000339844 IFNL2Q8IZJ0 200 aa8□□□□□ -1.13
ZNF28-201ENST00000339844 SYTL4Q96C24 671 aaPredicted RBP8□□□□□ -1.13
ZNF28-201ENST00000339844 PHACTR3Q96KR7 559 aa8□□□□□ -1.13
ZNF28-201ENST00000339844 UPF2Q9HAU5 1272 aaKnown RBP8□□□□□ -1.13
ZNF28-201ENST00000339844 KDM6AO15550 1401 aaPredicted RBP8□□□□□ -1.13
ZNF28-201ENST00000339844 SENP3-EIF4A1A0A087X0R7 540 aa7.99□□□□□ -1.13
ZNF28-201ENST00000339844 GNPATO15228 680 aa7.99□□□□□ -1.13
ZNF28-201ENST00000339844 EIF5BO60841 1220 aaKnown RBP7.99□□□□□ -1.13
ZNF28-201ENST00000339844 RARSP54136 660 aaKnown RBP7.99□□□□□ -1.13
ZNF28-201ENST00000339844 AK7Q96M32 723 aa7.99□□□□□ -1.13
ZNF28-201ENST00000339844 PNNQ9H307 717 aaKnown RBP7.99□□□□□ -1.13
ZNF28-201ENST00000339844 MYH16Q9H6N6 1097 aa7.99□□□□□ -1.13
ZNF28-201ENST00000339844 BTAF1O14981 1849 aa7.99□□□□□ -1.13
ZNF28-201ENST00000339844 PLSCR1O15162 318 aa7.98□□□□□ -1.13
ZNF28-201ENST00000339844 BCAR3O75815 825 aa7.98□□□□□ -1.13
ZNF28-201ENST00000339844 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
ZNF28-201ENST00000339844 IL16Q14005 1332 aa7.98□□□□□ -1.13
ZNF28-201ENST00000339844 VIRMAQ69YN4 1812 aaKnown RBP7.97□□□□□ -1.13
ZNF28-201ENST00000339844 IGHDP01880 384 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 PTGDRQ13258 359 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 TXNRD1Q16881 649 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 TSR1Q2NL82 804 aaKnown RBP7.97□□□□□ -1.13
ZNF28-201ENST00000339844 AKAP4Q5JQC9 854 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 C1orf141Q5JVX7 400 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 C6orf132Q5T0Z8 1188 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 L1TD1Q5T7N2 865 aaKnown RBP7.97□□□□□ -1.13
ZNF28-201ENST00000339844 PIGBQ92521 554 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 PLEKHF1Q96S99 279 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 CHMP4BQ9H444 224 aaKnown RBP7.97□□□□□ -1.13
ZNF28-201ENST00000339844 LGR6Q9HBX8 967 aa7.97□□□□□ -1.13
ZNF28-201ENST00000339844 RREB1Q92766 1687 aa7.96□□□□□ -1.13
ZNF28-201ENST00000339844 HSP90AB1P08238 724 aaKnown RBP7.96□□□□□ -1.14
ZNF28-201ENST00000339844 CANXP27824 592 aaKnown RBP7.96□□□□□ -1.14
ZNF28-201ENST00000339844 KCNQ4P56696 695 aa7.96□□□□□ -1.14
ZNF28-201ENST00000339844 NEUROD2Q15784 382 aa7.96□□□□□ -1.14
ZNF28-201ENST00000339844 CCDC146Q8IYE0 955 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms