RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LINS1Q8NG48 757 aa18.52■□□□□ 0.55
CDK5RAP3-201ENST00000338399 NUP188Q5SRE5 1749 aa18.51■□□□□ 0.55
CDK5RAP3-201ENST00000338399 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
CDK5RAP3-201ENST00000338399 GNAI2P04899 355 aa18.51■□□□□ 0.55
CDK5RAP3-201ENST00000338399 IGKV5-2P06315 115 aa18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 AFDNP55196 1824 aaKnown RBP18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 NBPF7P0C2Y1 421 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 COL5A3P25940 1745 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 CRKLP46109 303 aaKnown RBP18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 SKAP1Q86WV1 359 aa18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 RPAP2Q8IXW5 612 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-201ENST00000338399 MYH14Q7Z406 1995 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-201ENST00000338399 KCNQ4P56696 695 aa18.49■□□□□ 0.55
CDK5RAP3-201ENST00000338399 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-201ENST00000338399 ANKRD44Q8N8A2 993 aa18.49■□□□□ 0.55
CDK5RAP3-201ENST00000338399 ARXQ96QS3 562 aa18.49■□□□□ 0.55
CDK5RAP3-201ENST00000338399 CCDC87Q9NVE4 849 aa18.49■□□□□ 0.55
CDK5RAP3-201ENST00000338399 NEURL1BA8MQ27 555 aa18.48■□□□□ 0.55
CDK5RAP3-201ENST00000338399 IL6STP40189 918 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-201ENST00000338399 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
CDK5RAP3-201ENST00000338399 C9orf78Q9NZ63 289 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-201ENST00000338399 LRRFIP2Q9Y608 721 aaKnown RBP18.48■□□□□ 0.55
CDK5RAP3-201ENST00000338399 LY75O60449 1722 aa18.48■□□□□ 0.55
CDK5RAP3-201ENST00000338399 KIF6Q6ZMV9 814 aa18.48■□□□□ 0.55
CDK5RAP3-201ENST00000338399 RREB1Q92766 1687 aa18.47■□□□□ 0.55
CDK5RAP3-201ENST00000338399 ATP5J2-PTCD1G3V325 749 aa18.47■□□□□ 0.55
CDK5RAP3-201ENST00000338399 LINC00116Q8NCU8 138 aa18.47■□□□□ 0.55
CDK5RAP3-201ENST00000338399 GRM8O00222 908 aa18.46■□□□□ 0.54
CDK5RAP3-201ENST00000338399 TRIM37O94972 964 aa18.46■□□□□ 0.54
CDK5RAP3-201ENST00000338399 GCKRQ14397 625 aa18.46■□□□□ 0.54
CDK5RAP3-201ENST00000338399 NPM2Q86SE8 214 aaKnown RBP18.46■□□□□ 0.54
CDK5RAP3-201ENST00000338399 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-201ENST00000338399 SMC5Q8IY18 1101 aa18.45■□□□□ 0.54
CDK5RAP3-201ENST00000338399 CCNL1Q9UK58 526 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP3-201ENST00000338399 MAP3K15Q6ZN16 1313 aa18.45■□□□□ 0.54
CDK5RAP3-201ENST00000338399 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
CDK5RAP3-201ENST00000338399 DZIP3Q86Y13 1208 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-201ENST00000338399 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
CDK5RAP3-201ENST00000338399 UTYO14607 1347 aa18.43■□□□□ 0.54
CDK5RAP3-201ENST00000338399 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-201ENST00000338399 EP400Q96L91 3159 aa18.43■□□□□ 0.54
CDK5RAP3-201ENST00000338399 ATP8B2P98198 1209 aa18.43■□□□□ 0.54
CDK5RAP3-201ENST00000338399 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
CDK5RAP3-201ENST00000338399 TAF1LQ8IZX4 1826 aa18.43■□□□□ 0.54
CDK5RAP3-201ENST00000338399 HMMRO75330 724 aa18.42■□□□□ 0.54
CDK5RAP3-201ENST00000338399 TCIRG1Q13488 830 aa18.42■□□□□ 0.54
CDK5RAP3-201ENST00000338399 HLFQ16534 295 aa18.42■□□□□ 0.54
CDK5RAP3-201ENST00000338399 NUP98P52948 1817 aa18.42■□□□□ 0.54
CDK5RAP3-201ENST00000338399 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
CDK5RAP3-201ENST00000338399 GIGYF2Q6Y7W6 1299 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP3-201ENST00000338399 DCTPP1Q9H773 170 aa18.41■□□□□ 0.54
CDK5RAP3-201ENST00000338399 RGS3P49796 1198 aa18.41■□□□□ 0.54
CDK5RAP3-201ENST00000338399 JARID2Q92833 1246 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-201ENST00000338399 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-201ENST00000338399 HDAC5Q9UQL6 1122 aa18.41■□□□□ 0.54
CDK5RAP3-201ENST00000338399 CNTNAP4Q9C0A0 1308 aa18.41■□□□□ 0.54
CDK5RAP3-201ENST00000338399 A0A087WZG4 1122 aa18.4■□□□□ 0.54
CDK5RAP3-201ENST00000338399 CCDC191Q8NCU4 936 aa18.4■□□□□ 0.54
CDK5RAP3-201ENST00000338399 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
CDK5RAP3-201ENST00000338399 ISCA1Q9BUE6 129 aa18.4■□□□□ 0.54
CDK5RAP3-201ENST00000338399 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
CDK5RAP3-201ENST00000338399 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.54
CDK5RAP3-201ENST00000338399 RC3H1Q5TC82 1133 aaKnown RBP18.39■□□□□ 0.54
CDK5RAP3-201ENST00000338399 PPP1R42Q7Z4L9 355 aa18.39■□□□□ 0.54
CDK5RAP3-201ENST00000338399 COL15A1P39059 1388 aa18.39■□□□□ 0.53
CDK5RAP3-201ENST00000338399 UBE3BQ7Z3V4 1068 aa18.39■□□□□ 0.53
CDK5RAP3-201ENST00000338399 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
CDK5RAP3-201ENST00000338399 NUCB1Q02818 461 aa18.38■□□□□ 0.53
CDK5RAP3-201ENST00000338399 HSP90AB3PQ58FF7 597 aa18.38■□□□□ 0.53
CDK5RAP3-201ENST00000338399 ANKRD45Q5TZF3 282 aa18.38■□□□□ 0.53
CDK5RAP3-201ENST00000338399 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 BICC1Q9H694 974 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 LRRC4BQ9NT99 713 aa18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 H7C1W4 665 aa18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 SRGAP3O43295 1099 aa18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 GPTP24298 496 aa18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 CASP7P55210 303 aa18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 TRIM28Q13263 835 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
CDK5RAP3-201ENST00000338399 CAMTA2O94983 1202 aa18.36■□□□□ 0.53
CDK5RAP3-201ENST00000338399 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
CDK5RAP3-201ENST00000338399 CHD1LQ86WJ1 897 aa18.36■□□□□ 0.53
CDK5RAP3-201ENST00000338399 LNPKQ9C0E8 428 aa18.36■□□□□ 0.53
CDK5RAP3-201ENST00000338399 GNPATO15228 680 aa18.35■□□□□ 0.53
CDK5RAP3-201ENST00000338399 RPS6KA4O75676 772 aa18.35■□□□□ 0.53
CDK5RAP3-201ENST00000338399 MTX1Q13505 466 aa18.35■□□□□ 0.53
CDK5RAP3-201ENST00000338399 POLA2Q14181 598 aa18.35■□□□□ 0.53
CDK5RAP3-201ENST00000338399 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
CDK5RAP3-201ENST00000338399 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
CDK5RAP3-201ENST00000338399 EXOC6BQ9Y2D4 811 aa18.35■□□□□ 0.53
CDK5RAP3-201ENST00000338399 APBB1O00213 710 aa18.34■□□□□ 0.53
CDK5RAP3-201ENST00000338399 PDE4AP27815 886 aa18.34■□□□□ 0.53
CDK5RAP3-201ENST00000338399 SLC27A3Q5K4L6 730 aa18.34■□□□□ 0.53
CDK5RAP3-201ENST00000338399 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
CDK5RAP3-201ENST00000338399 BCORQ6W2J9 1755 aa18.34■□□□□ 0.53
CDK5RAP3-201ENST00000338399 APBA3O96018 575 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms