RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 A1BGP04217 495 aa14.29□□□□□ -0.12
APOBEC3B-201ENST00000333467 TM4SF1P30408 202 aa14.29□□□□□ -0.12
APOBEC3B-201ENST00000333467 IL6STP40189 918 aaPredicted RBP14.29□□□□□ -0.12
APOBEC3B-201ENST00000333467 NFIXQ14938 502 aa14.29□□□□□ -0.12
APOBEC3B-201ENST00000333467 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
APOBEC3B-201ENST00000333467 CARMIL3Q8ND23 1372 aa14.29□□□□□ -0.12
APOBEC3B-201ENST00000333467 SBF1O95248 1867 aa14.29□□□□□ -0.12
APOBEC3B-201ENST00000333467 ADCY9O60503 1353 aa14.28□□□□□ -0.12
APOBEC3B-201ENST00000333467 A0A087WZG4 1122 aa14.28□□□□□ -0.12
APOBEC3B-201ENST00000333467 DPEP1P16444 411 aa14.28□□□□□ -0.12
APOBEC3B-201ENST00000333467 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-201ENST00000333467 TAF7Q15545 349 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-201ENST00000333467 MIS18AQ9NYP9 233 aa14.28□□□□□ -0.12
APOBEC3B-201ENST00000333467 ANKRD36CQ5JPF3 1778 aa14.28□□□□□ -0.12
APOBEC3B-201ENST00000333467 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.12
APOBEC3B-201ENST00000333467 SNRPA1P09661 255 aaKnown RBP14.27□□□□□ -0.12
APOBEC3B-201ENST00000333467 USP16Q9Y5T5 823 aa14.27□□□□□ -0.12
APOBEC3B-201ENST00000333467 CCDC88AQ3V6T2 1871 aa14.27□□□□□ -0.13
APOBEC3B-201ENST00000333467 ATP10DQ9P241 1426 aa14.27□□□□□ -0.13
APOBEC3B-201ENST00000333467 TBC1D2BQ9UPU7 963 aa14.26□□□□□ -0.13
APOBEC3B-201ENST00000333467 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
APOBEC3B-201ENST00000333467 WDR43Q15061 677 aaKnown RBP eCLIP14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 BICDL1Q6ZP65 573 aa14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 CCDC146Q8IYE0 955 aa14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 TNRC6CQ9HCJ0 1690 aaKnown RBP14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 CAMTA2O94983 1202 aa14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 KCNA3P22001 575 aa14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 CHRNA5P30532 468 aa14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 TBC1D9BQ66K14 1250 aa14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 NPM2Q86SE8 214 aaKnown RBP14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
APOBEC3B-201ENST00000333467 TCERG1O14776 1098 aaKnown RBP14.24□□□□□ -0.13
APOBEC3B-201ENST00000333467 SERPINB2P05120 415 aa14.24□□□□□ -0.13
APOBEC3B-201ENST00000333467 TMPOP42166 694 aaKnown RBP14.24□□□□□ -0.13
APOBEC3B-201ENST00000333467 RIPK4P57078 832 aa14.24□□□□□ -0.13
APOBEC3B-201ENST00000333467 NBPF26B4DH59 902 aa14.23□□□□□ -0.13
APOBEC3B-201ENST00000333467 MS4A1P11836 297 aa14.23□□□□□ -0.13
APOBEC3B-201ENST00000333467 NBPF10Q6P3W6 841 aaKnown RBP14.23□□□□□ -0.13
APOBEC3B-201ENST00000333467 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
APOBEC3B-201ENST00000333467 NBPF15Q8N660 670 aa14.23□□□□□ -0.13
APOBEC3B-201ENST00000333467 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
APOBEC3B-201ENST00000333467 FER1L6Q2WGJ9 1857 aa14.22□□□□□ -0.13
APOBEC3B-201ENST00000333467 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
APOBEC3B-201ENST00000333467 LMOD3Q0VAK6 560 aa14.22□□□□□ -0.13
APOBEC3B-201ENST00000333467 GIGYF1O75420 1035 aaPredicted RBP14.21□□□□□ -0.13
APOBEC3B-201ENST00000333467 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
APOBEC3B-201ENST00000333467 PIM2Q9P1W9 311 aa14.21□□□□□ -0.13
APOBEC3B-201ENST00000333467 TSPYL4Q9UJ04 414 aa14.21□□□□□ -0.13
APOBEC3B-201ENST00000333467 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.13
APOBEC3B-201ENST00000333467 SLX4Q8IY92 1834 aa14.21□□□□□ -0.14
APOBEC3B-201ENST00000333467 ANP32AP39687 249 aaKnown RBP14.2□□□□□ -0.14
APOBEC3B-201ENST00000333467 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
APOBEC3B-201ENST00000333467 PRR5LQ6MZQ0 368 aa14.2□□□□□ -0.14
APOBEC3B-201ENST00000333467 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
APOBEC3B-201ENST00000333467 DALRD3Q5D0E6 543 aaKnown RBP14.2□□□□□ -0.14
APOBEC3B-201ENST00000333467 CCDC24Q8N4L8 307 aa14.19□□□□□ -0.14
APOBEC3B-201ENST00000333467 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.19□□□□□ -0.14
APOBEC3B-201ENST00000333467 CNBD1Q8NA66 436 aa14.19□□□□□ -0.14
APOBEC3B-201ENST00000333467 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
APOBEC3B-201ENST00000333467 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
APOBEC3B-201ENST00000333467 LAMB2P55268 1798 aa14.19□□□□□ -0.14
APOBEC3B-201ENST00000333467 ARHGAP27Q6ZUM4 889 aa14.18□□□□□ -0.14
APOBEC3B-201ENST00000333467 C2CD5Q86YS7 1000 aa14.18□□□□□ -0.14
APOBEC3B-201ENST00000333467 ZNF521Q96K83 1311 aa14.18□□□□□ -0.14
APOBEC3B-201ENST00000333467 NPHP1O15259 732 aa14.17□□□□□ -0.14
APOBEC3B-201ENST00000333467 CLEC4GQ6UXB4 293 aa14.17□□□□□ -0.14
APOBEC3B-201ENST00000333467 ZNF526Q8TF50 670 aaPredicted RBP14.17□□□□□ -0.14
APOBEC3B-201ENST00000333467 TRIM35Q9UPQ4 493 aa14.17□□□□□ -0.14
APOBEC3B-201ENST00000333467 MYL6BP14649 208 aa14.16□□□□□ -0.14
APOBEC3B-201ENST00000333467 ST5P78524 1137 aa14.16□□□□□ -0.14
APOBEC3B-201ENST00000333467 BABAM1Q9NWV8 329 aa14.16□□□□□ -0.14
APOBEC3B-201ENST00000333467 ERBB4Q15303 1308 aa14.16□□□□□ -0.14
APOBEC3B-201ENST00000333467 H0YIN7 160 aa14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 RGL2O15211 777 aa14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 HLFQ16534 295 aa14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 BRIP1Q9BX63 1249 aa14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 GPBP1L1Q9HC44 474 aaPredicted RBP14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 NIP7Q9Y221 180 aaKnown RBP eCLIP14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 PDE6BP35913 854 aa14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 GOLGA2Q08379 1002 aa14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 KIF6Q6ZMV9 814 aa14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 NBPF5PQ86XG9 351 aaPredicted RBP14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 EXOC6Q8TAG9 804 aa14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 NOP58Q9Y2X3 529 aaKnown RBP14.15□□□□□ -0.14
APOBEC3B-201ENST00000333467 MAP3K15Q6ZN16 1313 aa14.14□□□□□ -0.15
APOBEC3B-201ENST00000333467 RASSF7Q02833 373 aa14.14□□□□□ -0.15
APOBEC3B-201ENST00000333467 TTLL7Q6ZT98 887 aa14.14□□□□□ -0.15
APOBEC3B-201ENST00000333467 TTLL6Q8N841 843 aa14.14□□□□□ -0.15
APOBEC3B-201ENST00000333467 ABCC12Q96J65 1359 aa14.13□□□□□ -0.15
APOBEC3B-201ENST00000333467 C1QTNF8P60827 252 aa14.13□□□□□ -0.15
APOBEC3B-201ENST00000333467 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
APOBEC3B-201ENST00000333467 IPO9Q96P70 1041 aaKnown RBP14.13□□□□□ -0.15
APOBEC3B-201ENST00000333467 ZBTB3Q9H5J0 574 aa14.13□□□□□ -0.15
APOBEC3B-201ENST00000333467 PLSCR2Q9NRY7 297 aa14.13□□□□□ -0.15
APOBEC3B-201ENST00000333467 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
APOBEC3B-201ENST00000333467 FAM177BA6PVY3 158 aa14.12□□□□□ -0.15
APOBEC3B-201ENST00000333467 EIF2S2P20042 333 aaKnown RBP14.12□□□□□ -0.15
APOBEC3B-201ENST00000333467 EVX2Q03828 476 aa14.12□□□□□ -0.15
APOBEC3B-201ENST00000333467 PROSER3Q2NL68 480 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms