RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ZBTB22O15209 634 aa11.98□□□□□ -0.49
C11orf54-201ENST00000331239 A1BGP04217 495 aa11.98□□□□□ -0.49
C11orf54-201ENST00000331239 KIF6Q6ZMV9 814 aa11.98□□□□□ -0.49
C11orf54-201ENST00000331239 PTF1AQ7RTS3 328 aa11.98□□□□□ -0.49
C11orf54-201ENST00000331239 LINC00116Q8NCU8 138 aa11.98□□□□□ -0.49
C11orf54-201ENST00000331239 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
C11orf54-201ENST00000331239 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
C11orf54-201ENST00000331239 CAMKK2Q96RR4 588 aa11.98□□□□□ -0.49
C11orf54-201ENST00000331239 NOP58Q9Y2X3 529 aaKnown RBP11.98□□□□□ -0.49
C11orf54-201ENST00000331239 SSFA2P28290 1259 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 MVPQ14764 893 aaKnown RBP11.97□□□□□ -0.49
C11orf54-201ENST00000331239 COPS6Q7L5N1 327 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 XAGE3Q8WTP9 111 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 BCORQ6W2J9 1755 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 ARFGEF2Q9Y6D5 1785 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 MAP3K15Q6ZN16 1313 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 PLIN1O60240 522 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 NEXNQ0ZGT2 675 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 G2E3Q7L622 706 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 METTL22Q9BUU2 404 aaPredicted RBP11.97□□□□□ -0.49
C11orf54-201ENST00000331239 BCL2L13Q9BXK5 485 aa11.97□□□□□ -0.49
C11orf54-201ENST00000331239 ADCY9O60503 1353 aa11.96□□□□□ -0.49
C11orf54-201ENST00000331239 PROSER3Q2NL68 480 aa11.96□□□□□ -0.49
C11orf54-201ENST00000331239 LINS1Q8NG48 757 aa11.96□□□□□ -0.49
C11orf54-201ENST00000331239 RTCBQ9Y3I0 505 aaKnown RBP11.96□□□□□ -0.49
C11orf54-201ENST00000331239 ANKRD36CQ5JPF3 1778 aa11.96□□□□□ -0.5
C11orf54-201ENST00000331239 COL15A1P39059 1388 aa11.96□□□□□ -0.5
C11orf54-201ENST00000331239 CRBNQ96SW2 442 aa11.96□□□□□ -0.5
C11orf54-201ENST00000331239 PHAXQ9H814 394 aaKnown RBP11.96□□□□□ -0.5
C11orf54-201ENST00000331239 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.5
C11orf54-201ENST00000331239 ZBTB1Q9Y2K1 713 aa11.96□□□□□ -0.5
C11orf54-201ENST00000331239 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 PROM2Q8N271 834 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 PI4KAP2A4QPH2 592 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 MYL6BP14649 208 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 PI4KAP1Q8N8J0 262 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 AK7Q96M32 723 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 SRCIN1Q9C0H9 1055 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 SCN7AQ01118 1682 aa11.95□□□□□ -0.5
C11orf54-201ENST00000331239 BEND3Q5T5X7 828 aa11.94□□□□□ -0.5
C11orf54-201ENST00000331239 GIGYF2Q6Y7W6 1299 aaKnown RBP11.94□□□□□ -0.5
C11orf54-201ENST00000331239 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
C11orf54-201ENST00000331239 LRRC4BQ9NT99 713 aa11.94□□□□□ -0.5
C11orf54-201ENST00000331239 NARFQ9UHQ1 456 aa11.94□□□□□ -0.5
C11orf54-201ENST00000331239 NUP98P52948 1817 aa11.94□□□□□ -0.5
C11orf54-201ENST00000331239 UTYO14607 1347 aa11.94□□□□□ -0.5
C11orf54-201ENST00000331239 GNAI3P08754 354 aa11.94□□□□□ -0.5
C11orf54-201ENST00000331239 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
C11orf54-201ENST00000331239 MAP3K2Q9Y2U5 619 aa11.94□□□□□ -0.5
C11orf54-201ENST00000331239 TCIRG1Q13488 830 aa11.93□□□□□ -0.5
C11orf54-201ENST00000331239 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
C11orf54-201ENST00000331239 DZIP3Q86Y13 1208 aaKnown RBP11.93□□□□□ -0.5
C11orf54-201ENST00000331239 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
C11orf54-201ENST00000331239 IPO9Q96P70 1041 aaKnown RBP11.93□□□□□ -0.5
C11orf54-201ENST00000331239 PARP10Q53GL7 1025 aa11.93□□□□□ -0.5
C11orf54-201ENST00000331239 ISCA1Q9BUE6 129 aa11.93□□□□□ -0.5
C11orf54-201ENST00000331239 TMEM57Q8N5G2 664 aa11.92□□□□□ -0.5
C11orf54-201ENST00000331239 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-201ENST00000331239 CAMTA2O94983 1202 aa11.92□□□□□ -0.5
C11orf54-201ENST00000331239 GNPATO15228 680 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 RLBP1P12271 317 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 PANK1Q8TE04 598 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 ZBTB40Q9NUA8 1239 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 AFDNP55196 1824 aaKnown RBP11.91□□□□□ -0.5
C11orf54-201ENST00000331239 C4AP0C0L4 1744 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 C20orf194Q5TEA3 1177 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 TTLL7Q6ZT98 887 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 ITPRIPQ8IWB1 547 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
C11orf54-201ENST00000331239 NEURL1BA8MQ27 555 aa11.9□□□□□ -0.5
C11orf54-201ENST00000331239 ZPR1O75312 459 aa11.9□□□□□ -0.5
C11orf54-201ENST00000331239 ANXA1P04083 346 aa11.9□□□□□ -0.5
C11orf54-201ENST00000331239 AIMP1Q12904 312 aaKnown RBP11.9□□□□□ -0.5
C11orf54-201ENST00000331239 STK32BQ9NY57 414 aa11.9□□□□□ -0.5
C11orf54-201ENST00000331239 PDE4AP27815 886 aa11.9□□□□□ -0.5
C11orf54-201ENST00000331239 CWC25Q9NXE8 425 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-201ENST00000331239 USP42Q9H9J4 1324 aaKnown RBP11.89□□□□□ -0.51
C11orf54-201ENST00000331239 RFC4P35249 363 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 ILDR2Q71H61 639 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 SLC16A10Q8TF71 515 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.515e-11■■■■□ 20.6
C11orf54-201ENST00000331239 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 GCKRQ14397 625 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 RPAP2Q8IXW5 612 aaPredicted RBP11.89□□□□□ -0.51
C11orf54-201ENST00000331239 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
C11orf54-201ENST00000331239 BACH2Q9BYV9 841 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
C11orf54-201ENST00000331239 F6X3S4 739 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 H7C1W4 665 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 IGKV5-2P06315 115 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-201ENST00000331239 SLC15A2Q16348 729 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 SLC4A10Q6U841 1118 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 PLA2G12BQ9BX93 195 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms