RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 SSH1Q8WYL5 1049 aa3.46□□□□□ -1.86
RGPD6-201ENST00000329516 SBF1O95248 1867 aa3.46□□□□□ -1.86
RGPD6-201ENST00000329516 CHL1O00533 1208 aa3.46□□□□□ -1.86
RGPD6-201ENST00000329516 NEFMP07197 916 aa3.46□□□□□ -1.86
RGPD6-201ENST00000329516 LOXHD1Q8IVV2 1947 aa3.46□□□□□ -1.86
RGPD6-201ENST00000329516 TENM4Q6N022 2769 aa3.46□□□□□ -1.86
RGPD6-201ENST00000329516 AGXT2Q9BYV1 514 aa3.46□□□□□ -1.86
RGPD6-201ENST00000329516 TRPM7Q96QT4 1865 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 RASSF10A6NK89 507 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 SLFNL1Q499Z3 407 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 RASEFQ8IZ41 740 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 POLA2Q14181 598 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 OSBPL3Q9H4L5 887 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 USP42Q9H9J4 1324 aaKnown RBP3.45□□□□□ -1.86
RGPD6-201ENST00000329516 ABL1P00519 1130 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 THUMPD2Q9BTF0 503 aaKnown RBP3.45□□□□□ -1.86
RGPD6-201ENST00000329516 PCM1Q15154 2024 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 FAM163BP0C2L3 166 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 DNAH7Q8WXX0 4024 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 PLEKHG3A1L390 1219 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 KCNQ3O43525 872 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 FOXP4Q8IVH2 680 aaPredicted RBP3.45□□□□□ -1.86
RGPD6-201ENST00000329516 KCNG1Q9UIX4 513 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 FBN1P35555 2871 aaKnown RBP3.45□□□□□ -1.86
RGPD6-201ENST00000329516 HMGB1P1B2RPK0 211 aaPredicted RBP3.45□□□□□ -1.86
RGPD6-201ENST00000329516 CTDNEP1O95476 244 aa3.45□□□□□ -1.86
RGPD6-201ENST00000329516 CENPJQ9HC77 1338 aaPredicted RBP3.45□□□□□ -1.86
RGPD6-201ENST00000329516 NAV1Q8NEY1 1877 aa3.44□□□□□ -1.86
RGPD6-201ENST00000329516 FRAT1Q92837 279 aaPredicted RBP3.44□□□□□ -1.86
RGPD6-201ENST00000329516 MED23Q9ULK4 1368 aa3.44□□□□□ -1.86
RGPD6-201ENST00000329516 HMGB1P09429 215 aaKnown RBP3.44□□□□□ -1.86
RGPD6-201ENST00000329516 CHMP7Q8WUX9 453 aaPredicted RBP3.44□□□□□ -1.86
RGPD6-201ENST00000329516 ANKRD36A6QL64 1941 aa3.44□□□□□ -1.86
RGPD6-201ENST00000329516 ZSWIM8A7E2V4 1837 aa3.44□□□□□ -1.86
RGPD6-201ENST00000329516 RNF225M0QZC1 329 aaPredicted RBP3.44□□□□□ -1.86
RGPD6-201ENST00000329516 STAC3Q96MF2 364 aa3.44□□□□□ -1.86
RGPD6-201ENST00000329516 MTRQ99707 1265 aa3.44□□□□□ -1.86
RGPD6-201ENST00000329516 TAOK2Q9UL54 1235 aa3.44□□□□□ -1.86
RGPD6-201ENST00000329516 EDC4Q6P2E9 1401 aaKnown RBP3.43□□□□□ -1.86
RGPD6-201ENST00000329516 PKD1L1Q8TDX9 2849 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 VGLL2Q8N8G2 317 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 TSC1Q92574 1164 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 PLEKHG1Q9ULL1 1385 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 A0A0U1RQJ8 604 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 C7orf43Q8WVR3 580 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 ATRIPQ8WXE1 791 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 P2RX7Q99572 595 aaKnown RBP3.43□□□□□ -1.86
RGPD6-201ENST00000329516 FAM217BQ9NTX9 383 aaPredicted RBP3.43□□□□□ -1.86
RGPD6-201ENST00000329516 OTOFQ9HC10 1997 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 DNAH1Q9P2D7 4330 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 IGKV5-2P06315 115 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 CUL4AQ13619 759 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 NBPF11Q86T75 865 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 GAS2L2Q8NHY3 880 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 SIRT1Q96EB6 747 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 TNS3Q68CZ2 1445 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 PNMA6EA0A0J9YXQ4 647 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 VEGFAP15692 232 aaPredicted RBP3.43□□□□□ -1.86
RGPD6-201ENST00000329516 MCCD1P59942 119 aaPredicted RBP3.43□□□□□ -1.86
RGPD6-201ENST00000329516 PROSER3Q2NL68 480 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 DHX37Q8IY37 1157 aaKnown RBP3.43□□□□□ -1.86
RGPD6-201ENST00000329516 KLHL34Q8N239 644 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 ZNF777Q9ULD5 760 aaPredicted RBP3.43□□□□□ -1.86
RGPD6-201ENST00000329516 MYH6P13533 1939 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 PRR29P0C7W0 189 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 CEBPAP49715 358 aaPredicted RBP3.43□□□□□ -1.86
RGPD6-201ENST00000329516 COL4A2P08572 1712 aa3.43□□□□□ -1.86
RGPD6-201ENST00000329516 HDAC1Q13547 482 aaPredicted RBP3.42□□□□□ -1.86
RGPD6-201ENST00000329516 WAPLQ7Z5K2 1190 aa3.42□□□□□ -1.86
RGPD6-201ENST00000329516 MRPL50Q8N5N7 158 aaKnown RBP3.42□□□□□ -1.86
RGPD6-201ENST00000329516 DICER1Q9UPY3 1922 aaKnown RBP3.42□□□□□ -1.86
RGPD6-201ENST00000329516 MYH8P13535 1937 aa3.42□□□□□ -1.86
RGPD6-201ENST00000329516 CDK11BP21127 795 aaKnown RBP3.42□□□□□ -1.86
RGPD6-201ENST00000329516 SLC4A1APQ9BWU0 796 aaKnown RBP3.42□□□□□ -1.86
RGPD6-201ENST00000329516 ZNF428Q96B54 188 aa3.42□□□□□ -1.86
RGPD6-201ENST00000329516 USP44Q9H0E7 712 aa3.42□□□□□ -1.86
RGPD6-201ENST00000329516 EMILIN1Q9Y6C2 1016 aa3.42□□□□□ -1.86
RGPD6-201ENST00000329516 PLEKHM2Q8IWE5 1019 aa3.42□□□□□ -1.86
RGPD6-201ENST00000329516 PATJQ8NI35 1801 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 MLECQ14165 292 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 OSCARQ8IYS5 282 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 PANK1Q8TE04 598 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 ADGRL3Q9HAR2 1447 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 STOX1Q6ZVD7 989 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 ANKLE1Q8NAG6 615 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 TSR2Q969E8 191 aaKnown RBP3.41□□□□□ -1.86
RGPD6-201ENST00000329516 SLX1AQ9BQ83 275 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 NFKBIBQ15653 356 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 ZNF568Q3ZCX4 644 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 NAA30Q147X3 362 aaPredicted RBP3.41□□□□□ -1.86
RGPD6-201ENST00000329516 ATP2B3Q16720 1220 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 TMEM63CQ9P1W3 806 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 NOTCH4Q99466 2003 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 SH2B2O14492 632 aaPredicted RBP3.41□□□□□ -1.86
RGPD6-201ENST00000329516 ERICH6BQ5W0A0 696 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 NLRP13Q86W25 1043 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 PDCL3Q9H2J4 239 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 LMBRD1Q9NUN5 540 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 CMYA5Q8N3K9 4069 aa3.41□□□□□ -1.86
RGPD6-201ENST00000329516 APAF1O14727 1248 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms