RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 GLTPD2A6NH11 291 aa30.89■■■□□ 2.54
TMEM54-201ENST00000329151 DPY19L2Q6NUT2 758 aa30.89■■■□□ 2.54
TMEM54-201ENST00000329151 SMC1BQ8NDV3 1235 aa30.89■■■□□ 2.54
TMEM54-201ENST00000329151 PRAMEF22A3QJZ6 481 aa30.88■■■□□ 2.53
TMEM54-201ENST00000329151 PNNQ9H307 717 aaKnown RBP30.88■■■□□ 2.53
TMEM54-201ENST00000329151 DLG5Q8TDM6 1919 aa30.87■■■□□ 2.53
TMEM54-201ENST00000329151 NFKBIEO00221 500 aa30.87■■■□□ 2.53
TMEM54-201ENST00000329151 VEGFAP15692 232 aaPredicted RBP30.87■■■□□ 2.53
TMEM54-201ENST00000329151 SOGA3Q5TF21 947 aa30.87■■■□□ 2.53
TMEM54-201ENST00000329151 STYK1Q6J9G0 422 aa30.87■■■□□ 2.53
TMEM54-201ENST00000329151 PNISRQ8TF01 805 aaKnown RBP30.87■■■□□ 2.53
TMEM54-201ENST00000329151 MASTLQ96GX5 879 aa30.86■■■□□ 2.53
TMEM54-201ENST00000329151 MAPK8IP3Q9UPT6 1336 aa30.86■■■□□ 2.53
TMEM54-201ENST00000329151 DICER1Q9UPY3 1922 aaKnown RBP30.85■■■□□ 2.53
TMEM54-201ENST00000329151 ERFEQ4G0M1 354 aa30.85■■■□□ 2.53
TMEM54-201ENST00000329151 TAOK3Q9H2K8 898 aa30.85■■■□□ 2.53
TMEM54-201ENST00000329151 FER1L6Q2WGJ9 1857 aa30.84■■■□□ 2.53
TMEM54-201ENST00000329151 GTF2E1P29083 439 aaPredicted RBP30.84■■■□□ 2.53
TMEM54-201ENST00000329151 TPTE2Q6XPS3 522 aa30.84■■■□□ 2.53
TMEM54-201ENST00000329151 NIP7Q9Y221 180 aaKnown RBP eCLIP30.84■■■□□ 2.53
TMEM54-201ENST00000329151 LAMB4A4D0S4 1761 aa30.84■■■□□ 2.53
TMEM54-201ENST00000329151 IFFO2Q5TF58 517 aa30.83■■■□□ 2.53
TMEM54-201ENST00000329151 SRGNP10124 158 aa30.82■■■□□ 2.52
TMEM54-201ENST00000329151 PRPF40BQ6NWY9 871 aaKnown RBP30.82■■■□□ 2.52
TMEM54-201ENST00000329151 MIS18AQ9NYP9 233 aa30.82■■■□□ 2.52
TMEM54-201ENST00000329151 SLX4Q8IY92 1834 aa30.82■■■□□ 2.52
TMEM54-201ENST00000329151 PRELPP51888 382 aa30.81■■■□□ 2.52
TMEM54-201ENST00000329151 ARFGEF2Q9Y6D5 1785 aa30.81■■■□□ 2.52
TMEM54-201ENST00000329151 FAM177BA6PVY3 158 aa30.8■■■□□ 2.52
TMEM54-201ENST00000329151 RGL2O15211 777 aa30.79■■■□□ 2.52
TMEM54-201ENST00000329151 NBPF26B4DH59 902 aa30.78■■■□□ 2.52
TMEM54-201ENST00000329151 NPR1P16066 1061 aa30.78■■■□□ 2.52
TMEM54-201ENST00000329151 NFE2L2Q16236 605 aa30.78■■■□□ 2.52
TMEM54-201ENST00000329151 NBPF10Q6P3W6 841 aaKnown RBP30.78■■■□□ 2.52
TMEM54-201ENST00000329151 NGEFQ8N5V2 710 aa30.78■■■□□ 2.52
TMEM54-201ENST00000329151 NBPF15Q8N660 670 aa30.78■■■□□ 2.52
TMEM54-201ENST00000329151 LTBP3Q9NS15 1303 aa30.77■■■□□ 2.52
TMEM54-201ENST00000329151 KIF6Q6ZMV9 814 aa30.77■■■□□ 2.52
TMEM54-201ENST00000329151 DNAJC5GQ8N7S2 189 aa30.77■■■□□ 2.52
TMEM54-201ENST00000329151 KDM3BQ7LBC6 1761 aa30.77■■■□□ 2.52
TMEM54-201ENST00000329151 HTRA3P83110 453 aa30.75■■■□□ 2.51
TMEM54-201ENST00000329151 CCDC93Q567U6 631 aa30.75■■■□□ 2.51
TMEM54-201ENST00000329151 KLRG1Q96E93 195 aa30.75■■■□□ 2.51
TMEM54-201ENST00000329151 RRP7AQ9Y3A4 280 aaKnown RBP30.74■■■□□ 2.51
TMEM54-201ENST00000329151 NYXQ9GZU5 481 aa30.73■■■□□ 2.51
TMEM54-201ENST00000329151 PLEKHF1Q96S99 279 aa30.71■■■□□ 2.51
TMEM54-201ENST00000329151 NUP98P52948 1817 aa30.7■■■□□ 2.51
TMEM54-201ENST00000329151 MYL6BP14649 208 aa30.7■■■□□ 2.51
TMEM54-201ENST00000329151 ALDH1B1P30837 517 aa30.7■■■□□ 2.51
TMEM54-201ENST00000329151 HLFQ16534 295 aa30.7■■■□□ 2.51
TMEM54-201ENST00000329151 THUMPD2Q9BTF0 503 aaKnown RBP30.7■■■□□ 2.51
TMEM54-201ENST00000329151 EIF4A1P60842 406 aaKnown RBP30.69■■■□□ 2.5
TMEM54-201ENST00000329151 ERVV-1B6SEH8 477 aa30.68■■■□□ 2.5
TMEM54-201ENST00000329151 RALBP1Q15311 655 aa30.67■■■□□ 2.5
TMEM54-201ENST00000329151 RTKN2Q8IZC4 609 aa30.67■■■□□ 2.5
TMEM54-201ENST00000329151 TSPYL4Q9UJ04 414 aa30.67■■■□□ 2.5
TMEM54-201ENST00000329151 MAP3K15Q6ZN16 1313 aa30.67■■■□□ 2.5
TMEM54-201ENST00000329151 KLRG2A4D1S0 409 aaPredicted RBP30.65■■■□□ 2.5
TMEM54-201ENST00000329151 IQCA1LA6NCM1 817 aa30.65■■■□□ 2.5
TMEM54-201ENST00000329151 FKBP4Q02790 459 aaKnown RBP eCLIP30.65■■■□□ 2.5
TMEM54-201ENST00000329151 DDNO94850 711 aaPredicted RBP30.64■■■□□ 2.5
TMEM54-201ENST00000329151 LMOD3Q0VAK6 560 aa30.64■■■□□ 2.5
TMEM54-201ENST00000329151 RPGRQ92834 1020 aaKnown RBP30.64■■■□□ 2.5
TMEM54-201ENST00000329151 ZBTB3Q9H5J0 574 aa30.64■■■□□ 2.5
TMEM54-201ENST00000329151 RIPK4P57078 832 aa30.63■■■□□ 2.49
TMEM54-201ENST00000329151 GPTP24298 496 aa30.62■■■□□ 2.49
TMEM54-201ENST00000329151 NUTM1Q86Y26 1132 aa30.62■■■□□ 2.49
TMEM54-201ENST00000329151 C7orf43Q8WVR3 580 aa30.62■■■□□ 2.49
TMEM54-201ENST00000329151 ERBB4Q15303 1308 aa30.62■■■□□ 2.49
TMEM54-201ENST00000329151 POTECB2RU33 542 aa30.61■■■□□ 2.49
TMEM54-201ENST00000329151 TTLL7Q6ZT98 887 aa30.61■■■□□ 2.49
TMEM54-201ENST00000329151 ZNF277Q9NRM2 450 aaPredicted RBP30.61■■■□□ 2.49
TMEM54-201ENST00000329151 CHADLQ6NUI6 762 aa30.6■■■□□ 2.49
TMEM54-201ENST00000329151 JMYQ8N9B5 988 aa30.6■■■□□ 2.49
TMEM54-201ENST00000329151 SCN4AP35499 1836 aa30.59■■■□□ 2.49
TMEM54-201ENST00000329151 EIF2S2P20042 333 aaKnown RBP30.59■■■□□ 2.49
TMEM54-201ENST00000329151 TMX4Q9H1E5 349 aaPredicted RBP30.58■■■□□ 2.49
TMEM54-201ENST00000329151 PPP1R42Q7Z4L9 355 aa30.57■■■□□ 2.48
TMEM54-201ENST00000329151 ABCC12Q96J65 1359 aa30.56■■■□□ 2.48
TMEM54-201ENST00000329151 IBTKQ9P2D0 1353 aaPredicted RBP30.56■■■□□ 2.48
TMEM54-201ENST00000329151 IARSP41252 1262 aaKnown RBP30.56■■■□□ 2.48
TMEM54-201ENST00000329151 CC2D2BQ6DHV5 1058 aa30.56■■■□□ 2.48
TMEM54-201ENST00000329151 SYNE4Q8N205 404 aa30.56■■■□□ 2.48
TMEM54-201ENST00000329151 JDP2Q8WYK2 163 aa30.56■■■□□ 2.48
TMEM54-201ENST00000329151 OLFM4Q6UX06 510 aa30.55■■■□□ 2.48
TMEM54-201ENST00000329151 RBM17Q96I25 401 aaKnown RBP30.55■■■□□ 2.48
TMEM54-201ENST00000329151 BABAM1Q9NWV8 329 aa30.55■■■□□ 2.48
TMEM54-201ENST00000329151 WDR43Q15061 677 aaKnown RBP eCLIP30.54■■■□□ 2.48
TMEM54-201ENST00000329151 CRY2Q49AN0 593 aa30.54■■■□□ 2.48
TMEM54-201ENST00000329151 PARP10Q53GL7 1025 aa30.54■■■□□ 2.48
TMEM54-201ENST00000329151 GIGYF2Q6Y7W6 1299 aaKnown RBP30.54■■■□□ 2.48
TMEM54-201ENST00000329151 TMPOP42166 694 aaKnown RBP30.53■■■□□ 2.48
TMEM54-201ENST00000329151 EAPPQ56P03 285 aaPredicted RBP30.53■■■□□ 2.48
TMEM54-201ENST00000329151 L3MBTL3Q96JM7 780 aaPredicted RBP30.53■■■□□ 2.48
TMEM54-201ENST00000329151 CLEC11AQ9Y240 323 aa30.53■■■□□ 2.48
TMEM54-201ENST00000329151 MYBBP1AQ9BQG0 1328 aaKnown RBP30.52■■■□□ 2.48
TMEM54-201ENST00000329151 DDX10Q13206 875 aaKnown RBP30.52■■■□□ 2.48
TMEM54-201ENST00000329151 NEUROD2Q15784 382 aa30.52■■■□□ 2.48
TMEM54-201ENST00000329151 GRIPAP1Q4V328 841 aa30.52■■■□□ 2.48
TMEM54-201ENST00000329151 SUSD4Q5VX71 490 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms