RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 MTFR1LQ9H019 292 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 PARP3Q9Y6F1 533 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 DZIP1LQ8IYY4 767 aaKnown RBP6.51□□□□□ -1.37
LRIT3-201ENST00000327908 CWC25Q9NXE8 425 aaPredicted RBP6.51□□□□□ -1.37
LRIT3-201ENST00000327908 CHPF2Q9P2E5 772 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 COL24A1Q17RW2 1714 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 HMMRO75330 724 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 EN1Q05925 392 aaPredicted RBP6.51□□□□□ -1.37
LRIT3-201ENST00000327908 XAGE3Q8WTP9 111 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 SETDB2Q96T68 719 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 FBXO3Q9UK99 471 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 EZH2Q15910 746 aaKnown RBP6.51□□□□□ -1.37
LRIT3-201ENST00000327908 SOGA3Q5TF21 947 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
LRIT3-201ENST00000327908 TPTE2Q6XPS3 522 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 TMX4Q9H1E5 349 aaPredicted RBP6.51□□□□□ -1.37
LRIT3-201ENST00000327908 ZBTB1Q9Y2K1 713 aa6.51□□□□□ -1.37
LRIT3-201ENST00000327908 ABCC4O15439 1325 aa6.5□□□□□ -1.37
LRIT3-201ENST00000327908 HSP90AB4PQ58FF6 505 aa6.5□□□□□ -1.37
LRIT3-201ENST00000327908 SSH1Q8WYL5 1049 aa6.5□□□□□ -1.37
LRIT3-201ENST00000327908 USP16Q9Y5T5 823 aa6.5□□□□□ -1.37
LRIT3-201ENST00000327908 RTL9Q8NET4 1388 aa6.5□□□□□ -1.37
LRIT3-201ENST00000327908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.5□□□□□ -1.37
LRIT3-201ENST00000327908 PCCAP05165 728 aaPredicted RBP6.5□□□□□ -1.37
LRIT3-201ENST00000327908 CC2D2BQ6DHV5 1058 aa6.5□□□□□ -1.37
LRIT3-201ENST00000327908 YTHDC1Q96MU7 727 aaKnown RBP6.5□□□□□ -1.37
LRIT3-201ENST00000327908 UTP14AQ9BVJ6 771 aaKnown RBP6.5□□□□□ -1.37
LRIT3-201ENST00000327908 KCNQ3O43525 872 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 IGSF3O75054 1194 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 CAMTA2O94983 1202 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 PDE6BP35913 854 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 RRP1P56182 461 aaKnown RBP6.49□□□□□ -1.37
LRIT3-201ENST00000327908 COPS6Q7L5N1 327 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 ISCA1Q9BUE6 129 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 PLA2G12BQ9BX93 195 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 MIS18AQ9NYP9 233 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 NPHP1O15259 732 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 CDCA7LQ96GN5 454 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 LAMB2P55268 1798 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 CASZ1Q86V15 1759 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 ARFGEF2Q9Y6D5 1785 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 DCAF8L1A6NGE4 600 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 SPON1Q9HCB6 807 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 LRP5O75197 1615 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 SH3TC1Q8TE82 1336 aa6.49□□□□□ -1.37
LRIT3-201ENST00000327908 EIF5BO60841 1220 aaKnown RBP6.48□□□□□ -1.37
LRIT3-201ENST00000327908 A1BGP04217 495 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 ZNF34Q8IZ26 560 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 C4AP0C0L4 1744 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 MSH5O43196 834 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 GTF2E1P29083 439 aaPredicted RBP6.48□□□□□ -1.37
LRIT3-201ENST00000327908 PDIA6Q15084 440 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 SLC10A5Q5PT55 438 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 ARHGEF1Q92888 912 aaKnown RBP6.48□□□□□ -1.37
LRIT3-201ENST00000327908 SLC4A9Q96Q91 983 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 UTYO14607 1347 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 NBPF26B4DH59 902 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 MYL6BP14649 208 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 NBPF10Q6P3W6 841 aaKnown RBP6.48□□□□□ -1.37
LRIT3-201ENST00000327908 NBPF15Q8N660 670 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 TSPYL6Q8N831 410 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 ZBTB38Q8NAP3 1195 aaPredicted RBP6.48□□□□□ -1.37
LRIT3-201ENST00000327908 C9orf78Q9NZ63 289 aaPredicted RBP6.48□□□□□ -1.37
LRIT3-201ENST00000327908 MAP3K2Q9Y2U5 619 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 CD2APQ9Y5K6 639 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 PNPLA7Q6ZV29 1317 aa6.48□□□□□ -1.37
LRIT3-201ENST00000327908 FAM182BQ5T319 152 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 CNBD1Q8NA66 436 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 ZBTB47Q9UFB7 747 aaPredicted RBP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 UBTFL1P0CB47 393 aaPredicted RBP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 TGFB2P61812 414 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 MVPQ14764 893 aaKnown RBP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 CCDC152Q4G0S7 254 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 NBPF5PQ86XG9 351 aaPredicted RBP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 ERC1Q8IUD2 1116 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 RPAP2Q8IXW5 612 aaPredicted RBP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 CDC5LQ99459 802 aaKnown RBP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 LRRC4BQ9NT99 713 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 NOB1Q9ULX3 412 aaKnown RBP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 PDE8AO60658 829 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 GNAI2P04899 355 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 LRP10Q7Z4F1 713 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 SPINK5Q9NQ38 1064 aaPredicted RBP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 NIP7Q9Y221 180 aaKnown RBP eCLIP6.47□□□□□ -1.37
LRIT3-201ENST00000327908 NRXN2Q9P2S2 1712 aa6.47□□□□□ -1.37
LRIT3-201ENST00000327908 GRM8O00222 908 aa6.46□□□□□ -1.37
LRIT3-201ENST00000327908 ELL2O00472 640 aaPredicted RBP6.46□□□□□ -1.37
LRIT3-201ENST00000327908 STYK1Q6J9G0 422 aa6.46□□□□□ -1.37
LRIT3-201ENST00000327908 PROM2Q8N271 834 aa6.46□□□□□ -1.37
LRIT3-201ENST00000327908 CNKSR1Q969H4 720 aa6.46□□□□□ -1.37
LRIT3-201ENST00000327908 BRIP1Q9BX63 1249 aa6.46□□□□□ -1.37
LRIT3-201ENST00000327908 ZNF330Q9Y3S2 320 aaPredicted RBP6.46□□□□□ -1.37
LRIT3-201ENST00000327908 PI4KAP2A4QPH2 592 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 NEURL1BA8MQ27 555 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 ALDH1B1P30837 517 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 PI4KAP1Q8N8J0 262 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 RBM17Q96I25 401 aaKnown RBP6.46□□□□□ -1.38
LRIT3-201ENST00000327908 NLRP3Q96P20 1036 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 ARXQ96QS3 562 aa6.46□□□□□ -1.38
LRIT3-201ENST00000327908 MYD88Q99836 296 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms