RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ADCY5O95622 1261 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 FKBP15Q5T1M5 1219 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 SPA17Q15506 151 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 CNNM3Q8NE01 707 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 KIF18AQ8NI77 898 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 GOLIM4O00461 696 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 UBE2HP62256 183 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 MKNK2Q9HBH9 465 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 SDSP20132 328 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 C8orf34Q49A92 452 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 NEK1Q96PY6 1258 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 CENPHQ9H3R5 247 aa12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 CWC25Q9NXE8 425 aaPredicted RBP12.67□□□□□ -0.38
SNRNP200-201ENST00000323853 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 IFIT3O14879 490 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 MCM5P33992 734 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 ARHGEF12Q9NZN5 1544 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 KLHL10Q6JEL2 608 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 PCDHB15Q9Y5E8 787 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 SEPT7Q16181 437 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 DZIP1Q86YF9 867 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 TMX3Q96JJ7 454 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 LRSAM1Q6UWE0 723 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 SHANK2Q9UPX8 1470 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 ZPR1O75312 459 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 ZSCAN22P10073 491 aaPredicted RBP12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 GSDMDP57764 484 aa12.66□□□□□ -0.38
SNRNP200-201ENST00000323853 TNNT1P13805 278 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 PIK3C2GO75747 1445 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 DNMT1P26358 1616 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 PI4KAP2A4QPH2 592 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 IQCA1Q86XH1 822 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 PI4KAP1Q8N8J0 262 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 RHPN1Q8TCX5 695 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 CATIPQ7Z7H3 387 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 ABCC1P33527 1531 aa12.65□□□□□ -0.38
SNRNP200-201ENST00000323853 NEFHP12036 1026 aa12.65□□□□□ -0.39
SNRNP200-201ENST00000323853 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.39
SNRNP200-201ENST00000323853 AEBP2Q6ZN18 517 aaPredicted RBP12.65□□□□□ -0.39
SNRNP200-201ENST00000323853 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.39
SNRNP200-201ENST00000323853 ANKRD24Q8TF21 1146 aa12.65□□□□□ -0.39
SNRNP200-201ENST00000323853 ERICH4A6NGS2 130 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 NLRP5P59047 1200 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 SNX21Q969T3 373 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 A2MP01023 1474 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 TMC6Q7Z403 805 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 ANKIB1Q9P2G1 1089 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 ESYT1Q9BSJ8 1104 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 ZBTB3Q9H5J0 574 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 MCM3P25205 808 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 MEIS3Q99687 375 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 URI1O94763 535 aaPredicted RBP12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 USP16Q9Y5T5 823 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 TNRQ92752 1358 aa12.64□□□□□ -0.39
SNRNP200-201ENST00000323853 PPP1R12BO60237 982 aaPredicted RBP12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 PKNOX2Q96KN3 472 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 FGFR1OPO95684 399 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 TMEM67Q5HYA8 995 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 ZNF444Q8N0Y2 327 aaPredicted RBP12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 CHPF2Q9P2E5 772 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 TMEM266Q2M3C6 531 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 ZSCAN16Q9H4T2 348 aaPredicted RBP12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 ZFYVE9O95405 1425 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 PDE1AP54750 535 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 METAP2P50579 478 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■□□□ 14.2
SNRNP200-201ENST00000323853 YEATS4O95619 227 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 CBX1P83916 185 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 CCDC144CPQ8IYA2 1237 aa12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 TEX13AQ9BXU3 409 aaPredicted RBP12.63□□□□□ -0.39
SNRNP200-201ENST00000323853 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 CCDC82Q8N4S0 544 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 FBLN1P23142 703 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 ATP8B2P98198 1209 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 C8orf58Q8NAV2 365 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 TMX1Q9H3N1 280 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 ZNF518AQ6AHZ1 1483 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 FOXO3O43524 673 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 SNRPA1P09661 255 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 ANAPC15P60006 121 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 PIP4K2BP78356 416 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 TNIP1Q15025 636 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 C16orf45Q96MC5 204 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
SNRNP200-201ENST00000323853 ZRSR2Q15696 482 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms