RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 MYL6BP14649 208 aa19.03■□□□□ 0.64
TSC22D3-201ENST00000315660 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
TSC22D3-201ENST00000315660 RIC3Q7Z5B4 369 aa19.03■□□□□ 0.64
TSC22D3-201ENST00000315660 TTC5Q8N0Z6 440 aa19.03■□□□□ 0.64
TSC22D3-201ENST00000315660 SUCLG2Q96I99 432 aa19.03■□□□□ 0.64
TSC22D3-201ENST00000315660 PALD1Q9ULE6 856 aa19.03■□□□□ 0.64
TSC22D3-201ENST00000315660 IGKV5-2P06315 115 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 MRE11P49959 708 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 NEXNQ0ZGT2 675 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 KAZALD1Q96I82 304 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 PA2G4Q9UQ80 394 aaKnown RBP19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 TTC41PQ6P2S7 1318 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 XIRP1Q702N8 1843 aaKnown RBP19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 NEK4P51957 841 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 CLEC17AQ6ZS10 378 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 XAGE3Q8WTP9 111 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 PANK2Q9BZ23 570 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 IL25Q9H293 177 aa19.02■□□□□ 0.64
TSC22D3-201ENST00000315660 SNRPA1P09661 255 aaKnown RBP19.01■□□□□ 0.63
TSC22D3-201ENST00000315660 IL17RAQ96F46 866 aa19.01■□□□□ 0.63
TSC22D3-201ENST00000315660 GPATCH3Q96I76 525 aa19.01■□□□□ 0.63
TSC22D3-201ENST00000315660 GLRX3O76003 335 aaKnown RBP19.01■□□□□ 0.63
TSC22D3-201ENST00000315660 COPS6Q7L5N1 327 aa19.01■□□□□ 0.63
TSC22D3-201ENST00000315660 BICC1Q9H694 974 aaKnown RBP19.01■□□□□ 0.63
TSC22D3-201ENST00000315660 ISY1Q9ULR0 285 aaKnown RBP19.01■□□□□ 0.63
TSC22D3-201ENST00000315660 USP16Q9Y5T5 823 aa19■□□□□ 0.63
TSC22D3-201ENST00000315660 LRP10Q7Z4F1 713 aa19■□□□□ 0.63
TSC22D3-201ENST00000315660 FMNL2Q96PY5 1086 aa19■□□□□ 0.63
TSC22D3-201ENST00000315660 AK9Q5TCS8 1911 aa18.99■□□□□ 0.63
TSC22D3-201ENST00000315660 NEURL1BA8MQ27 555 aa18.99■□□□□ 0.63
TSC22D3-201ENST00000315660 SGSM2O43147 1006 aa18.99■□□□□ 0.63
TSC22D3-201ENST00000315660 CYP2E1P05181 493 aaPredicted RBP18.99■□□□□ 0.63
TSC22D3-201ENST00000315660 ZGPATQ8N5A5 531 aaKnown RBP18.99■□□□□ 0.63
TSC22D3-201ENST00000315660 METTL22Q9BUU2 404 aaPredicted RBP18.99■□□□□ 0.63
TSC22D3-201ENST00000315660 IFIT2P09913 472 aaKnown RBP18.98■□□□□ 0.63
TSC22D3-201ENST00000315660 CABP4P57796 275 aa18.98■□□□□ 0.63
TSC22D3-201ENST00000315660 BAG4O95429 457 aaKnown RBP18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 GCKRQ14397 625 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 MYD88Q99836 296 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 PRDM11Q9NQV5 511 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 ECHDC1Q9NTX5 307 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 HSPA4P34932 840 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 G3BP1Q13283 466 aaKnown RBP eCLIP18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 ANKRD13DQ6ZTN6 518 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 TMX3Q96JJ7 454 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 GRPEL1Q9HAV7 217 aa18.97■□□□□ 0.63
TSC22D3-201ENST00000315660 RAD50Q92878 1312 aa18.96■□□□□ 0.63
TSC22D3-201ENST00000315660 SASH1O94885 1247 aa18.96■□□□□ 0.63
TSC22D3-201ENST00000315660 PIP4K2AP48426 406 aaPredicted RBP18.96■□□□□ 0.63
TSC22D3-201ENST00000315660 PKP1Q13835 747 aa18.96■□□□□ 0.63
TSC22D3-201ENST00000315660 KIAA1211Q6ZU35 1233 aa18.96■□□□□ 0.63
TSC22D3-201ENST00000315660 PARP4Q9UKK3 1724 aaKnown RBP18.95■□□□□ 0.62
TSC22D3-201ENST00000315660 SOS2Q07890 1332 aaPredicted RBP18.95■□□□□ 0.62
TSC22D3-201ENST00000315660 CLCN1P35523 988 aa18.95■□□□□ 0.62
TSC22D3-201ENST00000315660 AACSQ86V21 672 aa18.95■□□□□ 0.62
TSC22D3-201ENST00000315660 RUFY2Q8WXA3 655 aa18.94■□□□□ 0.62
TSC22D3-201ENST00000315660 LSG1Q9H089 658 aaKnown RBP18.94■□□□□ 0.62
TSC22D3-201ENST00000315660 TOM1L2Q6ZVM7 507 aa18.94■□□□□ 0.62
TSC22D3-201ENST00000315660 DIAPH3Q9NSV4 1193 aa18.94■□□□□ 0.62
TSC22D3-201ENST00000315660 SLAIN2Q9P270 581 aa18.94■□□□□ 0.62
TSC22D3-201ENST00000315660 GLI3P10071 1580 aa18.94■□□□□ 0.62
TSC22D3-201ENST00000315660 CUL4AQ13619 759 aa18.93■□□□□ 0.62
TSC22D3-201ENST00000315660 EPHA10Q5JZY3 1008 aa18.93■□□□□ 0.62
TSC22D3-201ENST00000315660 CWC27Q6UX04 472 aaKnown RBP18.93■□□□□ 0.62
TSC22D3-201ENST00000315660 ZCRB1Q8TBF4 217 aaKnown RBP18.93■□□□□ 0.62
TSC22D3-201ENST00000315660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.93■□□□□ 0.62
TSC22D3-201ENST00000315660 PCDH11XQ9BZA7 1347 aa18.93■□□□□ 0.62
TSC22D3-201ENST00000315660 PCDH11YQ9BZA8 1340 aa18.93■□□□□ 0.62
TSC22D3-201ENST00000315660 UPF3BQ9BZI7 483 aaKnown RBP18.93■□□□□ 0.62
TSC22D3-201ENST00000315660 COL5A2P05997 1499 aaPredicted RBP18.92■□□□□ 0.62
TSC22D3-201ENST00000315660 UBE2Q2Q8WVN8 375 aa18.92■□□□□ 0.62
TSC22D3-201ENST00000315660 EAF2Q96CJ1 260 aaPredicted RBP18.92■□□□□ 0.62
TSC22D3-201ENST00000315660 STRCQ7RTU9 1775 aa18.92■□□□□ 0.62
TSC22D3-201ENST00000315660 EVI5LQ96CN4 794 aa18.92■□□□□ 0.62
TSC22D3-201ENST00000315660 INTS4Q96HW7 963 aaKnown RBP18.92■□□□□ 0.62
TSC22D3-201ENST00000315660 SIL1Q9H173 461 aa18.92■□□□□ 0.62
TSC22D3-201ENST00000315660 ZDHHC9Q9Y397 364 aa18.91■□□□□ 0.62
TSC22D3-201ENST00000315660 ZNF335Q9H4Z2 1342 aaPredicted RBP18.91■□□□□ 0.62
TSC22D3-201ENST00000315660 KLHDC4Q8TBB5 520 aa18.9■□□□□ 0.62
TSC22D3-201ENST00000315660 LAMB4A4D0S4 1761 aa18.9■□□□□ 0.62
TSC22D3-201ENST00000315660 MCTP1Q6DN14 999 aa18.9■□□□□ 0.62
TSC22D3-201ENST00000315660 NOL8Q76FK4 1167 aaKnown RBP18.9■□□□□ 0.62
TSC22D3-201ENST00000315660 CCDC8Q9H0W5 538 aaPredicted RBP18.9■□□□□ 0.62
TSC22D3-201ENST00000315660 SNX14Q9Y5W7 946 aa18.9■□□□□ 0.62
TSC22D3-201ENST00000315660 DDX49Q9Y6V7 483 aaKnown RBP18.9■□□□□ 0.62
TSC22D3-201ENST00000315660 ERVV-2B6SEH9 535 aa18.89■□□□□ 0.61
TSC22D3-201ENST00000315660 KLHL40Q2TBA0 621 aa18.89■□□□□ 0.61
TSC22D3-201ENST00000315660 PLBD2Q8NHP8 589 aa18.89■□□□□ 0.61
TSC22D3-201ENST00000315660 HIP1O00291 1037 aa18.89■□□□□ 0.61
TSC22D3-201ENST00000315660 JARID2Q92833 1246 aaPredicted RBP18.89■□□□□ 0.61
TSC22D3-201ENST00000315660 ERBB4Q15303 1308 aa18.89■□□□□ 0.61
TSC22D3-201ENST00000315660 COL15A1P39059 1388 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 UBE3BQ7Z3V4 1068 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 CARD10Q9BWT7 1032 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 TLR7Q9NYK1 1049 aaKnown RBP18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 ARFGEF2Q9Y6D5 1785 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 NBPF26B4DH59 902 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 ATP5J2-PTCD1G3V325 749 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 PTCD1O75127 700 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms