RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 ARHGEF28Q8N1W1 1705 aaKnown RBP16.96■□□□□ 0.31
EDC3-201ENST00000315127 CEBPZQ03701 1054 aaKnown RBP16.96■□□□□ 0.31
EDC3-201ENST00000315127 RAB11FIP4Q86YS3 637 aa16.96■□□□□ 0.31
EDC3-201ENST00000315127 RNF214Q8ND24 703 aa16.96■□□□□ 0.31
EDC3-201ENST00000315127 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.3
EDC3-201ENST00000315127 MPHOSPH8Q99549 860 aa16.96■□□□□ 0.3
EDC3-201ENST00000315127 TTC39AQ5SRH9 613 aa16.95■□□□□ 0.3
EDC3-201ENST00000315127 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
EDC3-201ENST00000315127 CHAMP1Q96JM3 812 aa16.95■□□□□ 0.3
EDC3-201ENST00000315127 FBXW7Q969H0 707 aa16.94■□□□□ 0.3
EDC3-201ENST00000315127 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
EDC3-201ENST00000315127 RRP12Q5JTH9 1297 aaKnown RBP16.94■□□□□ 0.3
EDC3-201ENST00000315127 CAVIN1Q6NZI2 390 aaKnown RBP16.94■□□□□ 0.3
EDC3-201ENST00000315127 ZGPATQ8N5A5 531 aaKnown RBP16.94■□□□□ 0.3
EDC3-201ENST00000315127 ADGRL3Q9HAR2 1447 aa16.94■□□□□ 0.3
EDC3-201ENST00000315127 FIBPO43427 364 aa16.94■□□□□ 0.3
EDC3-201ENST00000315127 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
EDC3-201ENST00000315127 IL27Q8NEV9 243 aa16.94■□□□□ 0.3
EDC3-201ENST00000315127 TFCP2Q12800 502 aa16.93■□□□□ 0.3
EDC3-201ENST00000315127 GNL2Q13823 731 aaKnown RBP16.93■□□□□ 0.3
EDC3-201ENST00000315127 ABCF2Q9UG63 623 aa16.93■□□□□ 0.3
EDC3-201ENST00000315127 KIAA1210Q9ULL0 1709 aa16.93■□□□□ 0.3
EDC3-201ENST00000315127 MCM4P33991 863 aa16.93■□□□□ 0.3
EDC3-201ENST00000315127 HAND2P61296 217 aa16.93■□□□□ 0.3
EDC3-201ENST00000315127 FAM184AQ8NB25 1140 aa16.93■□□□□ 0.3
EDC3-201ENST00000315127 DDX11Q96FC9 970 aa16.93■□□□□ 0.3
EDC3-201ENST00000315127 BEND3Q5T5X7 828 aa16.93■□□□□ 0.3
EDC3-201ENST00000315127 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 SMIM5Q71RC9 77 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 OVOS2A0A0J9YW53 1432 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 OVOS2Q6IE36 1432 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 H3BQV1 296 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
EDC3-201ENST00000315127 IFFO2Q5TF58 517 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
EDC3-201ENST00000315127 TULP1O00294 542 aaPredicted RBP16.92■□□□□ 0.3
EDC3-201ENST00000315127 CD2BP2O95400 341 aaKnown RBP16.92■□□□□ 0.3
EDC3-201ENST00000315127 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 MYOM1P52179 1685 aa16.92■□□□□ 0.3
EDC3-201ENST00000315127 DDX11L8A8MPP1 907 aa16.91■□□□□ 0.3
EDC3-201ENST00000315127 IFIT1P09914 478 aaKnown RBP16.91■□□□□ 0.3
EDC3-201ENST00000315127 HCLS1P14317 486 aaPredicted RBP16.91■□□□□ 0.3
EDC3-201ENST00000315127 CCDC158Q5M9N0 1113 aa16.91■□□□□ 0.3
EDC3-201ENST00000315127 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
EDC3-201ENST00000315127 ESYT1Q9BSJ8 1104 aa16.91■□□□□ 0.3
EDC3-201ENST00000315127 TNPO1Q92973 898 aaKnown RBP16.91■□□□□ 0.3
EDC3-201ENST00000315127 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
EDC3-201ENST00000315127 DBNDD2Q9BQY9 259 aa16.9■□□□□ 0.3
EDC3-201ENST00000315127 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
EDC3-201ENST00000315127 JAG2Q9Y219 1238 aa16.9■□□□□ 0.3
EDC3-201ENST00000315127 GCKRQ14397 625 aa16.89■□□□□ 0.3
EDC3-201ENST00000315127 FAM227BQ96M60 508 aa16.89■□□□□ 0.3
EDC3-201ENST00000315127 TLR7Q9NYK1 1049 aaKnown RBP16.89■□□□□ 0.29
EDC3-201ENST00000315127 SPATA31A3Q5VYP0 1347 aa16.89■□□□□ 0.29
EDC3-201ENST00000315127 PCDH11XQ9BZA7 1347 aa16.89■□□□□ 0.29
EDC3-201ENST00000315127 PCDH11YQ9BZA8 1340 aa16.89■□□□□ 0.29
EDC3-201ENST00000315127 CHST3Q7LGC8 479 aa16.89■□□□□ 0.29
EDC3-201ENST00000315127 SYNE4Q8N205 404 aa16.89■□□□□ 0.29
EDC3-201ENST00000315127 ALDH1L1O75891 902 aa16.88■□□□□ 0.29
EDC3-201ENST00000315127 CHMLP26374 656 aa16.88■□□□□ 0.29
EDC3-201ENST00000315127 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
EDC3-201ENST00000315127 TOM1O60784 492 aa16.88■□□□□ 0.29
EDC3-201ENST00000315127 CYP46A1Q9Y6A2 500 aa16.88■□□□□ 0.29
EDC3-201ENST00000315127 USP31Q70CQ4 1352 aa16.88■□□□□ 0.29
EDC3-201ENST00000315127 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
EDC3-201ENST00000315127 NEURL1BA8MQ27 555 aa16.87■□□□□ 0.29
EDC3-201ENST00000315127 EAF2Q96CJ1 260 aaPredicted RBP16.87■□□□□ 0.29
EDC3-201ENST00000315127 METTL22Q9BUU2 404 aaPredicted RBP16.87■□□□□ 0.29
EDC3-201ENST00000315127 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
EDC3-201ENST00000315127 RIMS1Q86UR5 1692 aaKnown RBP16.87■□□□□ 0.29
EDC3-201ENST00000315127 PALD1Q9ULE6 856 aa16.87■□□□□ 0.29
EDC3-201ENST00000315127 DZIP3Q86Y13 1208 aaKnown RBP16.87■□□□□ 0.29
EDC3-201ENST00000315127 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
EDC3-201ENST00000315127 CDC42BPGQ6DT37 1551 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 RAD21O60216 631 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 NUCB2P80303 420 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 CHAF1AQ13111 956 aaPredicted RBP16.86■□□□□ 0.29
EDC3-201ENST00000315127 BLOC1S2Q6QNY1 142 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 CCDC82Q8N4S0 544 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 IQSEC2Q5JU85 1478 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 ATP2B1P20020 1258 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 ZRSR1Q15695 479 aaKnown RBP16.86■□□□□ 0.29
EDC3-201ENST00000315127 CEP170BQ9Y4F5 1589 aaPredicted RBP16.86■□□□□ 0.29
EDC3-201ENST00000315127 GUCY1B3Q02153 619 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
EDC3-201ENST00000315127 G3V3G9 751 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 CPLX1O14810 134 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 NMIQ13287 307 aaPredicted RBP16.85■□□□□ 0.29
EDC3-201ENST00000315127 DCAF8Q5TAQ9 597 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 DIP2AQ14689 1571 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 C1orf167Q5SNV9 1468 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 TECPR2O15040 1411 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 SLFNL1Q499Z3 407 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 NFXL1Q6ZNB6 911 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 RALYLQ86SE5 291 aaKnown RBP16.85■□□□□ 0.29
EDC3-201ENST00000315127 TMX3Q96JJ7 454 aa16.85■□□□□ 0.29
EDC3-201ENST00000315127 NIP7Q9Y221 180 aaKnown RBP eCLIP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms