RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SRP68Q9UHB9 627 aaKnown RBP22.89■■□□□ 1.25
SSSCA1-201ENST00000309328 ANXA1P04083 346 aa22.88■■□□□ 1.25
SSSCA1-201ENST00000309328 BRPF1P55201 1214 aaPredicted RBP22.88■■□□□ 1.25
SSSCA1-201ENST00000309328 ANKRD13DQ6ZTN6 518 aa22.88■■□□□ 1.25
SSSCA1-201ENST00000309328 SMIM5Q71RC9 77 aa22.88■■□□□ 1.25
SSSCA1-201ENST00000309328 C4AP0C0L4 1744 aa22.88■■□□□ 1.25
SSSCA1-201ENST00000309328 AIMP1Q12904 312 aaKnown RBP22.87■■□□□ 1.25
SSSCA1-201ENST00000309328 FLIIQ13045 1269 aa22.87■■□□□ 1.25
SSSCA1-201ENST00000309328 TTLL7Q6ZT98 887 aa22.87■■□□□ 1.25
SSSCA1-201ENST00000309328 GIGYF2Q6Y7W6 1299 aaKnown RBP22.86■■□□□ 1.25
SSSCA1-201ENST00000309328 SCN7AQ01118 1682 aa22.86■■□□□ 1.25
SSSCA1-201ENST00000309328 PTPRCP08575 1304 aa22.85■■□□□ 1.25
SSSCA1-201ENST00000309328 ATP10DQ9P241 1426 aa22.85■■□□□ 1.25
SSSCA1-201ENST00000309328 FKBP8Q14318 412 aa22.85■■□□□ 1.25
SSSCA1-201ENST00000309328 SSH1Q8WYL5 1049 aa22.85■■□□□ 1.25
SSSCA1-201ENST00000309328 SMC4Q9NTJ3 1288 aa22.85■■□□□ 1.25
SSSCA1-201ENST00000309328 KIF16BQ96L93 1317 aa22.84■■□□□ 1.25
SSSCA1-201ENST00000309328 RARSP54136 660 aaKnown RBP22.84■■□□□ 1.25
SSSCA1-201ENST00000309328 RIC3Q7Z5B4 369 aa22.84■■□□□ 1.25
SSSCA1-201ENST00000309328 SETDB2Q96T68 719 aa22.84■■□□□ 1.25
SSSCA1-201ENST00000309328 ZBTB3Q9H5J0 574 aa22.84■■□□□ 1.25
SSSCA1-201ENST00000309328 PHAXQ9H814 394 aaKnown RBP22.84■■□□□ 1.25
SSSCA1-201ENST00000309328 BCL2L12Q9HB09 334 aa22.84■■□□□ 1.25
SSSCA1-201ENST00000309328 FKBP5Q13451 457 aaPredicted RBP22.83■■□□□ 1.25
SSSCA1-201ENST00000309328 KSR2Q6VAB6 950 aa22.83■■□□□ 1.25
SSSCA1-201ENST00000309328 MRPL50Q8N5N7 158 aaKnown RBP22.83■■□□□ 1.25
SSSCA1-201ENST00000309328 ATF5Q9Y2D1 282 aaPredicted RBP22.83■■□□□ 1.25
SSSCA1-201ENST00000309328 PARP3Q9Y6F1 533 aa22.83■■□□□ 1.25
SSSCA1-201ENST00000309328 CARMIL3Q8ND23 1372 aa22.83■■□□□ 1.25
SSSCA1-201ENST00000309328 CACNA1FO60840 1977 aa22.83■■□□□ 1.24
SSSCA1-201ENST00000309328 TCERG1O14776 1098 aaKnown RBP22.82■■□□□ 1.24
SSSCA1-201ENST00000309328 MMP10P09238 476 aa22.82■■□□□ 1.24
SSSCA1-201ENST00000309328 TM4SF1P30408 202 aa22.82■■□□□ 1.24
SSSCA1-201ENST00000309328 PARP10Q53GL7 1025 aa22.82■■□□□ 1.24
SSSCA1-201ENST00000309328 MSL1Q68DK7 614 aa22.82■■□□□ 1.24
SSSCA1-201ENST00000309328 SGIP1Q9BQI5 828 aa22.82■■□□□ 1.24
SSSCA1-201ENST00000309328 BCORQ6W2J9 1755 aa22.81■■□□□ 1.24
SSSCA1-201ENST00000309328 PTGER2P43116 358 aa22.81■■□□□ 1.24
SSSCA1-201ENST00000309328 NEXNQ0ZGT2 675 aa22.81■■□□□ 1.24
SSSCA1-201ENST00000309328 TCIRG1Q13488 830 aa22.81■■□□□ 1.24
SSSCA1-201ENST00000309328 NFIXQ14938 502 aa22.81■■□□□ 1.24
SSSCA1-201ENST00000309328 HLFQ16534 295 aa22.8■■□□□ 1.24
SSSCA1-201ENST00000309328 NIP7Q9Y221 180 aaKnown RBP eCLIP22.8■■□□□ 1.24
SSSCA1-201ENST00000309328 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 IBTKQ9P2D0 1353 aaPredicted RBP22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 PI4KAP2A4QPH2 592 aa22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 IPO8O15397 1037 aaKnown RBP22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 TRIM28Q13263 835 aaKnown RBP22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 TBC1D9BQ66K14 1250 aa22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 PI4KAP1Q8N8J0 262 aa22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 NYXQ9GZU5 481 aa22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 RNF123Q5XPI4 1314 aa22.79■■□□□ 1.24
SSSCA1-201ENST00000309328 G2E3Q7L622 706 aa22.78■■□□□ 1.24
SSSCA1-201ENST00000309328 ZNF34Q8IZ26 560 aa22.78■■□□□ 1.24
SSSCA1-201ENST00000309328 ARHGAP45Q92619 1136 aa22.78■■□□□ 1.24
SSSCA1-201ENST00000309328 METTL22Q9BUU2 404 aaPredicted RBP22.78■■□□□ 1.24
SSSCA1-201ENST00000309328 MAP3K2Q9Y2U5 619 aa22.78■■□□□ 1.24
SSSCA1-201ENST00000309328 POLRMTO00411 1230 aaKnown RBP22.77■■□□□ 1.24
SSSCA1-201ENST00000309328 PPP1R42Q7Z4L9 355 aa22.77■■□□□ 1.24
SSSCA1-201ENST00000309328 DNAAF4Q8WXU2 420 aa22.77■■□□□ 1.24
SSSCA1-201ENST00000309328 PPP1R1BQ9UD71 204 aaPredicted RBP22.77■■□□□ 1.24
SSSCA1-201ENST00000309328 LRP5O75197 1615 aa22.76■■□□□ 1.23
SSSCA1-201ENST00000309328 TPTE2Q6XPS3 522 aa22.76■■□□□ 1.23
SSSCA1-201ENST00000309328 BCL2L13Q9BXK5 485 aa22.76■■□□□ 1.23
SSSCA1-201ENST00000309328 API5Q9BZZ5 524 aaKnown RBP22.76■■□□□ 1.23
SSSCA1-201ENST00000309328 ADCY9O60503 1353 aa22.76■■□□□ 1.23
SSSCA1-201ENST00000309328 SERPINB2P05120 415 aa22.75■■□□□ 1.23
SSSCA1-201ENST00000309328 DDR1Q08345 913 aa22.75■■□□□ 1.23
SSSCA1-201ENST00000309328 BICDL1Q6ZP65 573 aa22.75■■□□□ 1.23
SSSCA1-201ENST00000309328 NBPF5PQ86XG9 351 aaPredicted RBP22.75■■□□□ 1.23
SSSCA1-201ENST00000309328 ISCA1Q9BUE6 129 aa22.75■■□□□ 1.23
SSSCA1-201ENST00000309328 NPHP1O15259 732 aa22.74■■□□□ 1.23
SSSCA1-201ENST00000309328 HSP90B1P14625 803 aaKnown RBP22.74■■□□□ 1.23
SSSCA1-201ENST00000309328 CNBD1Q8NA66 436 aa22.74■■□□□ 1.23
SSSCA1-201ENST00000309328 CCDC191Q8NCU4 936 aa22.74■■□□□ 1.23
SSSCA1-201ENST00000309328 RCAN3Q9UKA8 241 aa22.74■■□□□ 1.23
SSSCA1-201ENST00000309328 ST5P78524 1137 aa22.73■■□□□ 1.23
SSSCA1-201ENST00000309328 PDZRN3Q9UPQ7 1066 aa22.73■■□□□ 1.23
SSSCA1-201ENST00000309328 CD2APQ9Y5K6 639 aa22.73■■□□□ 1.23
SSSCA1-201ENST00000309328 SRCAPQ6ZRS2 3230 aa22.73■■□□□ 1.23
SSSCA1-201ENST00000309328 GPTP24298 496 aa22.72■■□□□ 1.23
SSSCA1-201ENST00000309328 NLRP10Q86W26 655 aa22.72■■□□□ 1.23
SSSCA1-201ENST00000309328 LINS1Q8NG48 757 aa22.72■■□□□ 1.23
SSSCA1-201ENST00000309328 MYD88Q99836 296 aa22.72■■□□□ 1.23
SSSCA1-201ENST00000309328 UTP14AQ9BVJ6 771 aaKnown RBP22.72■■□□□ 1.23
SSSCA1-201ENST00000309328 NOB1Q9ULX3 412 aaKnown RBP22.72■■□□□ 1.23
SSSCA1-201ENST00000309328 PXDNLA1KZ92 1463 aa22.72■■□□□ 1.23
SSSCA1-201ENST00000309328 GTF2E1P29083 439 aaPredicted RBP22.71■■□□□ 1.23
SSSCA1-201ENST00000309328 CWC25Q9NXE8 425 aaPredicted RBP22.71■■□□□ 1.23
SSSCA1-201ENST00000309328 UBN2Q6ZU65 1347 aa22.71■■□□□ 1.23
SSSCA1-201ENST00000309328 MS4A1P11836 297 aa22.7■■□□□ 1.22
SSSCA1-201ENST00000309328 BCAR3O75815 825 aa22.69■■□□□ 1.22
SSSCA1-201ENST00000309328 ALDH1L1O75891 902 aa22.69■■□□□ 1.22
SSSCA1-201ENST00000309328 ZKSCAN2Q63HK3 967 aa22.69■■□□□ 1.22
SSSCA1-201ENST00000309328 ATF7IPQ6VMQ6 1270 aa22.69■■□□□ 1.22
SSSCA1-201ENST00000309328 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.69■■□□□ 1.22
SSSCA1-201ENST00000309328 NUP98P52948 1817 aa22.68■■□□□ 1.22
SSSCA1-201ENST00000309328 C10orf71Q711Q0 1435 aa22.68■■□□□ 1.22
SSSCA1-201ENST00000309328 CCT4P50991 539 aaKnown RBP22.68■■□□□ 1.22
SSSCA1-201ENST00000309328 PRR5LQ6MZQ0 368 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms