RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 CFBP00751 764 aa1.64□□□□□ -2.15
CEP290-201ENST00000309041 MBL2P11226 248 aaPredicted RBP1.64□□□□□ -2.15
CEP290-201ENST00000309041 GJA1P17302 382 aa1.64□□□□□ -2.15
CEP290-201ENST00000309041 POU5F1Q01860 360 aaKnown RBP1.64□□□□□ -2.15
CEP290-201ENST00000309041 PDE3BQ13370 1112 aa1.64□□□□□ -2.15
CEP290-201ENST00000309041 HOMER1Q86YM7 354 aa1.64□□□□□ -2.15
CEP290-201ENST00000309041 NPAS4Q8IUM7 802 aa1.64□□□□□ -2.15
CEP290-201ENST00000309041 NPHP3Q7Z494 1330 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 MAPKBP1O60336 1514 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 MAGEA13PA6NCF6 341 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 ATP9BO43861 1147 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 USP12O75317 370 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 C20orf194Q5TEA3 1177 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 TICAM2Q86XR7 235 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 USP33Q8TEY7 942 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 GJD4Q96KN9 370 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 CCDC140Q96MF4 163 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 RAPGEF6Q8TEU7 1601 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 SMARCA4P51532 1647 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 ABCA6Q8N139 1617 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 HGSO14964 777 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 FAM109BQ6ICB4 259 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 CCER1Q8TC90 406 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 TSPY26PQ9H489 355 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 PDGFCQ9NRA1 345 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 C6orf203Q9P0P8 240 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 CA5BQ9Y2D0 317 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 KIF14Q15058 1648 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 USP54Q70EL1 1684 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 RIMBP2O15034 1052 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 HOXD8P13378 290 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 MAN1A1P33908 653 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 FXR2P51116 673 aaKnown RBP eCLIP1.63□□□□□ -2.15
CEP290-201ENST00000309041 NADK2Q4G0N4 442 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 TMEM92Q6UXU6 159 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 ZBTB46Q86UZ6 589 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 LOXL4Q96JB6 756 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 RADILQ96JH8 1075 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 UNKQ9C0B0 810 aaKnown RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 ITIH6Q6UXX5 1313 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 CC2D2AQ9P2K1 1620 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 KINO60870 393 aaKnown RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 KRT3P12035 628 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 UBE2Q1Q7Z7E8 422 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 FTSJ3Q8IY81 847 aaKnown RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 GTF3C2Q8WUA4 911 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 NGRNQ9NPE2 291 aaKnown RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 CHST12Q9NRB3 414 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 SYNMO15061 1565 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 CLSPNQ9HAW4 1339 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 SWI5Q1ZZU3 235 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 CHRDL2Q6WN34 429 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 DDX46Q7L014 1031 aaKnown RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 PHLDB2Q86SQ0 1253 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 ACBD4Q8NC06 268 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 DRC1Q96MC2 740 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 PARP2Q9UGN5 583 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 PPM1HQ9ULR3 514 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 COL15A1P39059 1388 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 GPC4O75487 556 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 POTEJP0CG39 1038 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 RNF224P0DH78 156 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 COL6A1P12109 1028 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 CEBPAP49715 358 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 CTAG1AP78358 180 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 XPCQ01831 940 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 AAK1Q2M2I8 961 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 SH3D19Q5HYK7 790 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 FAM182AQ5T1J6 154 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 BEST4Q8NFU0 473 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 DNAJC25Q9H1X3 360 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 SESN1Q9Y6P5 492 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 SOS1Q07889 1333 aaPredicted RBP1.63□□□□□ -2.15
CEP290-201ENST00000309041 KIF7Q2M1P5 1343 aa1.63□□□□□ -2.15
CEP290-201ENST00000309041 MAGI2Q86UL8 1455 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 PRDM15P57071 1507 aaPredicted RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 A0A087WZG4 1122 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 CSPG5O95196 566 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 WEE1P30291 646 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 AIMP2Q13155 320 aaKnown RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 PAXIP1Q6ZW49 1069 aaPredicted RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 PNISRQ8TF01 805 aaKnown RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 CLRN2A0PK11 232 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 NR1I2O75469 434 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 FBLN1P23142 703 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 PSMC1P62191 440 aaKnown RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 ZSCAN29Q8IWY8 852 aaPredicted RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 CCDC13Q8IYE1 715 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 CRACR2BQ8N4Y2 399 aaPredicted RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 RUSC1Q9BVN2 902 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 HELLSQ9NRZ9 838 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 THRAP3Q9Y2W1 955 aaKnown RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 CD2APQ9Y5K6 639 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 IGF1RP08069 1367 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 MROH1Q8NDA8 1641 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 DIAPH2O60879 1101 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 ABCB7O75027 752 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 EEF2P13639 858 aaKnown RBP1.62□□□□□ -2.15
CEP290-201ENST00000309041 GYS1P13807 737 aa1.62□□□□□ -2.15
CEP290-201ENST00000309041 HDGFP51858 240 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms