RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 SMARCA5O60264 1052 aaPredicted RBP12.71□□□□□ -0.38
KDM2A-201ENST00000308783 TICAM2Q86XR7 235 aa12.7□□□□□ -0.38
KDM2A-201ENST00000308783 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
KDM2A-201ENST00000308783 ZNF496Q96IT1 587 aaPredicted RBP12.7□□□□□ -0.38
KDM2A-201ENST00000308783 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
KDM2A-201ENST00000308783 CCT4P50991 539 aaKnown RBP12.7□□□□□ -0.38
KDM2A-201ENST00000308783 OTUD7AQ8TE49 926 aaPredicted RBP12.7□□□□□ -0.38
KDM2A-201ENST00000308783 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
KDM2A-201ENST00000308783 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
KDM2A-201ENST00000308783 USP44Q9H0E7 712 aa12.69□□□□□ -0.38
KDM2A-201ENST00000308783 MRE11P49959 708 aa12.69□□□□□ -0.38
KDM2A-201ENST00000308783 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
KDM2A-201ENST00000308783 ABCA3Q99758 1704 aa12.69□□□□□ -0.38
KDM2A-201ENST00000308783 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
KDM2A-201ENST00000308783 PNMA6EA0A0J9YXQ4 647 aa12.69□□□□□ -0.38
KDM2A-201ENST00000308783 HEG1Q9ULI3 1381 aa12.68□□□□□ -0.38
KDM2A-201ENST00000308783 MYL6BP14649 208 aa12.68□□□□□ -0.38
KDM2A-201ENST00000308783 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
KDM2A-201ENST00000308783 ZCRB1Q8TBF4 217 aaKnown RBP12.68□□□□□ -0.38
KDM2A-201ENST00000308783 DCTPP1Q9H773 170 aa12.68□□□□□ -0.38
KDM2A-201ENST00000308783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.385e-7■■■□□ 16
KDM2A-201ENST00000308783 USP16Q9Y5T5 823 aa12.68□□□□□ -0.38
KDM2A-201ENST00000308783 SIPA1L3O60292 1781 aaPredicted RBP12.68□□□□□ -0.38
KDM2A-201ENST00000308783 ROBO1Q9Y6N7 1651 aa12.68□□□□□ -0.38
KDM2A-201ENST00000308783 DCAF5Q96JK2 942 aa12.68□□□□□ -0.38
KDM2A-201ENST00000308783 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
KDM2A-201ENST00000308783 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
KDM2A-201ENST00000308783 RBM25P49756 843 aaKnown RBP12.68□□□□□ -0.38
KDM2A-201ENST00000308783 OVOS2A0A0G2JMS6 1433 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 CABP4P57796 275 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 PDIA6Q15084 440 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 SCN11AQ9UI33 1791 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 ADCY9O60503 1353 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 AXDND1Q5T1B0 1012 aaPredicted RBP12.67□□□□□ -0.38
KDM2A-201ENST00000308783 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
KDM2A-201ENST00000308783 EXOC6BQ9Y2D4 811 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 ADAMTS2O95450 1211 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 HOXB7P09629 217 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 IL2RBP14784 551 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 RPAP2Q8IXW5 612 aaPredicted RBP12.67□□□□□ -0.38
KDM2A-201ENST00000308783 GPATCH11Q8N954 259 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 TMX1Q9H3N1 280 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
KDM2A-201ENST00000308783 GNAI2P04899 355 aa12.66□□□□□ -0.38
KDM2A-201ENST00000308783 CARD10Q9BWT7 1032 aa12.66□□□□□ -0.38
KDM2A-201ENST00000308783 MAP3K2Q9Y2U5 619 aa12.66□□□□□ -0.38
KDM2A-201ENST00000308783 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
KDM2A-201ENST00000308783 CWF19L2Q2TBE0 894 aaKnown RBP12.66□□□□□ -0.38
KDM2A-201ENST00000308783 DNAAF4Q8WXU2 420 aa12.66□□□□□ -0.38
KDM2A-201ENST00000308783 OFD1O75665 1012 aa12.66□□□□□ -0.38
KDM2A-201ENST00000308783 BEND3Q5T5X7 828 aa12.66□□□□□ -0.38
KDM2A-201ENST00000308783 LTBP4Q8N2S1 1624 aa12.65□□□□□ -0.38
KDM2A-201ENST00000308783 BECN1Q14457 450 aa12.65□□□□□ -0.38
KDM2A-201ENST00000308783 SRCIN1Q9C0H9 1055 aa12.65□□□□□ -0.38
KDM2A-201ENST00000308783 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.39
KDM2A-201ENST00000308783 CACNA1FO60840 1977 aa12.65□□□□□ -0.39
KDM2A-201ENST00000308783 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
KDM2A-201ENST00000308783 TSC1Q92574 1164 aa12.64□□□□□ -0.39
KDM2A-201ENST00000308783 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
KDM2A-201ENST00000308783 C5P01031 1676 aa12.64□□□□□ -0.39
KDM2A-201ENST00000308783 ABCC6O95255 1503 aa12.64□□□□□ -0.39
KDM2A-201ENST00000308783 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
KDM2A-201ENST00000308783 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
KDM2A-201ENST00000308783 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
KDM2A-201ENST00000308783 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
KDM2A-201ENST00000308783 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
KDM2A-201ENST00000308783 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
KDM2A-201ENST00000308783 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
KDM2A-201ENST00000308783 ERICH4A6NGS2 130 aa12.63□□□□□ -0.39
KDM2A-201ENST00000308783 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
KDM2A-201ENST00000308783 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
KDM2A-201ENST00000308783 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
KDM2A-201ENST00000308783 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
KDM2A-201ENST00000308783 GNAI3P08754 354 aa12.63□□□□□ -0.39
KDM2A-201ENST00000308783 PSEN1P49768 467 aa12.63□□□□□ -0.39
KDM2A-201ENST00000308783 DDX21Q9NR30 783 aaKnown RBP eCLIP12.63□□□□□ -0.39
KDM2A-201ENST00000308783 COPS6Q7L5N1 327 aa12.62□□□□□ -0.39
KDM2A-201ENST00000308783 JARID2Q92833 1246 aaPredicted RBP12.62□□□□□ -0.39
KDM2A-201ENST00000308783 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
KDM2A-201ENST00000308783 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
KDM2A-201ENST00000308783 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
KDM2A-201ENST00000308783 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
KDM2A-201ENST00000308783 HSP90AB1P08238 724 aaKnown RBP12.61□□□□□ -0.39
KDM2A-201ENST00000308783 ATP8B2P98198 1209 aa12.61□□□□□ -0.39
KDM2A-201ENST00000308783 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
KDM2A-201ENST00000308783 SNRPA1P09661 255 aaKnown RBP12.61□□□□□ -0.39
KDM2A-201ENST00000308783 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
KDM2A-201ENST00000308783 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
KDM2A-201ENST00000308783 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
KDM2A-201ENST00000308783 DYNC1I1O14576 645 aa12.6□□□□□ -0.39
KDM2A-201ENST00000308783 ZSCAN30Q86W11 494 aa12.6□□□□□ -0.39
KDM2A-201ENST00000308783 HYPKQ9NX55 129 aa12.6□□□□□ -0.39
KDM2A-201ENST00000308783 LRP10Q7Z4F1 713 aa12.6□□□□□ -0.39
KDM2A-201ENST00000308783 HMMRO75330 724 aa12.6□□□□□ -0.39
KDM2A-201ENST00000308783 MRC1P22897 1456 aa12.6□□□□□ -0.39
KDM2A-201ENST00000308783 BMP2KLQ5H9B9 411 aa12.59□□□□□ -0.39
KDM2A-201ENST00000308783 RIC3Q7Z5B4 369 aa12.59□□□□□ -0.39
KDM2A-201ENST00000308783 IL1RAPL2Q9NP60 686 aa12.59□□□□□ -0.39
KDM2A-201ENST00000308783 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms