RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 TIMELESSQ9UNS1 1208 aa12.9□□□□□ -0.34
TEFM-201ENST00000306049 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
TEFM-201ENST00000306049 SCN4AP35499 1836 aa12.9□□□□□ -0.34
TEFM-201ENST00000306049 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
TEFM-201ENST00000306049 RASSF10A6NK89 507 aa12.89□□□□□ -0.35
TEFM-201ENST00000306049 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
TEFM-201ENST00000306049 TAF1DQ9H5J8 278 aaPredicted RBP12.89□□□□□ -0.35
TEFM-201ENST00000306049 ZBTB22O15209 634 aa12.88□□□□□ -0.35
TEFM-201ENST00000306049 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
TEFM-201ENST00000306049 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
TEFM-201ENST00000306049 TAOK3Q9H2K8 898 aa12.88□□□□□ -0.35
TEFM-201ENST00000306049 ABT1Q9ULW3 272 aaKnown RBP12.88□□□□□ -0.35
TEFM-201ENST00000306049 BCORQ6W2J9 1755 aa12.87□□□□□ -0.35
TEFM-201ENST00000306049 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
TEFM-201ENST00000306049 EIF4G2P78344 907 aaKnown RBP eCLIP12.87□□□□□ -0.35
TEFM-201ENST00000306049 VSIG10Q8N0Z9 540 aa12.87□□□□□ -0.35
TEFM-201ENST00000306049 HMOX1P09601 288 aa12.86□□□□□ -0.35
TEFM-201ENST00000306049 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
TEFM-201ENST00000306049 TBC1D9BQ66K14 1250 aa12.86□□□□□ -0.35
TEFM-201ENST00000306049 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
TEFM-201ENST00000306049 KNSTRNQ9Y448 316 aa12.86□□□□□ -0.35
TEFM-201ENST00000306049 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
TEFM-201ENST00000306049 A0A087WZG4 1122 aa12.85□□□□□ -0.35
TEFM-201ENST00000306049 MTHFSDQ2M296 383 aaKnown RBP12.85□□□□□ -0.35
TEFM-201ENST00000306049 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
TEFM-201ENST00000306049 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
TEFM-201ENST00000306049 STARD3NLO95772 234 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 PDE6BP35913 854 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 ECE1P42892 770 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 GRM1Q13255 1194 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 PRR5LQ6MZQ0 368 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 CCDC24Q8N4L8 307 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 MCOLN1Q9GZU1 580 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 HACL1Q9UJ83 578 aa12.84□□□□□ -0.35
TEFM-201ENST00000306049 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
TEFM-201ENST00000306049 MAP1SQ66K74 1059 aaPredicted RBP12.83□□□□□ -0.36
TEFM-201ENST00000306049 PNMA8AQ86V59 439 aaPredicted RBP12.83□□□□□ -0.36
TEFM-201ENST00000306049 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
TEFM-201ENST00000306049 EPHX2P34913 555 aa12.82□□□□□ -0.36
TEFM-201ENST00000306049 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
TEFM-201ENST00000306049 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
TEFM-201ENST00000306049 CAPNS2Q96L46 248 aa12.82□□□□□ -0.36
TEFM-201ENST00000306049 GPR101Q96P66 508 aaPredicted RBP12.82□□□□□ -0.36
TEFM-201ENST00000306049 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
TEFM-201ENST00000306049 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
TEFM-201ENST00000306049 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
TEFM-201ENST00000306049 ZNF330Q9Y3S2 320 aaPredicted RBP12.82□□□□□ -0.36
TEFM-201ENST00000306049 PDE4DIPQ5VU43 2346 aa12.82□□□□□ -0.36
TEFM-201ENST00000306049 HEG1Q9ULI3 1381 aa12.81□□□□□ -0.36
TEFM-201ENST00000306049 CNKSR1Q969H4 720 aa12.81□□□□□ -0.36
TEFM-201ENST00000306049 ZNF496Q96IT1 587 aaPredicted RBP12.81□□□□□ -0.36
TEFM-201ENST00000306049 CASP8AP2Q9UKL3 1982 aa12.81□□□□□ -0.36
TEFM-201ENST00000306049 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
TEFM-201ENST00000306049 ADAMTSL1Q8N6G6 1762 aa12.8□□□□□ -0.36
TEFM-201ENST00000306049 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
TEFM-201ENST00000306049 STYK1Q6J9G0 422 aa12.8□□□□□ -0.36
TEFM-201ENST00000306049 CYP4F22Q6NT55 531 aa12.8□□□□□ -0.36
TEFM-201ENST00000306049 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
TEFM-201ENST00000306049 TEX13AQ9BXU3 409 aaPredicted RBP12.8□□□□□ -0.36
TEFM-201ENST00000306049 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
TEFM-201ENST00000306049 NPHP1O15259 732 aa12.79□□□□□ -0.36
TEFM-201ENST00000306049 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
TEFM-201ENST00000306049 SRGNP10124 158 aa12.79□□□□□ -0.36
TEFM-201ENST00000306049 TEFQ10587 303 aa12.79□□□□□ -0.36
TEFM-201ENST00000306049 DGKZQ13574 1117 aa12.79□□□□□ -0.36
TEFM-201ENST00000306049 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
TEFM-201ENST00000306049 CNBD1Q8NA66 436 aa12.79□□□□□ -0.36
TEFM-201ENST00000306049 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
TEFM-201ENST00000306049 THSD7BQ9C0I4 1608 aa12.79□□□□□ -0.36
TEFM-201ENST00000306049 CA12O43570 354 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 CAMTA2O94983 1202 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 A1BGP04217 495 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 ST5P78524 1137 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 RNF123Q5XPI4 1314 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 ZNF541Q9H0D2 1346 aa12.78□□□□□ -0.36
TEFM-201ENST00000306049 TRPM7Q96QT4 1865 aa12.77□□□□□ -0.37
TEFM-201ENST00000306049 GNAT3A8MTJ3 354 aa12.77□□□□□ -0.37
TEFM-201ENST00000306049 MAP2K2P36507 400 aa12.77□□□□□ -0.37
TEFM-201ENST00000306049 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
TEFM-201ENST00000306049 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
TEFM-201ENST00000306049 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.37
TEFM-201ENST00000306049 AOC2O75106 756 aa12.76□□□□□ -0.37
TEFM-201ENST00000306049 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
TEFM-201ENST00000306049 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
TEFM-201ENST00000306049 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
TEFM-201ENST00000306049 FKBP4Q02790 459 aaKnown RBP eCLIP12.75□□□□□ -0.37
TEFM-201ENST00000306049 LTBP1Q14766 1721 aa12.75□□□□□ -0.37
TEFM-201ENST00000306049 CCDC93Q567U6 631 aa12.75□□□□□ -0.37
TEFM-201ENST00000306049 PRPF38BQ5VTL8 546 aaKnown RBP12.75□□□□□ -0.37
TEFM-201ENST00000306049 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
TEFM-201ENST00000306049 ZNF277Q9NRM2 450 aaPredicted RBP12.75□□□□□ -0.37
TEFM-201ENST00000306049 NUP98P52948 1817 aa12.74□□□□□ -0.37
TEFM-201ENST00000306049 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
TEFM-201ENST00000306049 KCNQ3O43525 872 aa12.74□□□□□ -0.37
TEFM-201ENST00000306049 FMR1Q06787 632 aaKnown RBP eCLIP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms