RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SNX14Q9Y5W7 946 aa6.64□□□□□ -1.35
VPS50-202ENST00000305866 TOGARAM1Q9Y4F4 1720 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
VPS50-202ENST00000305866 ARXQ96QS3 562 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 CHMP4AQ9BY43 222 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 PYCARDQ9ULZ3 195 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 MED23Q9ULK4 1368 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 MCM2P49736 904 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 KAZALD1Q96I82 304 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 MYH13Q9UKX3 1938 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 SGSM2O43147 1006 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 RAB11FIP3O75154 756 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 MCM10Q7L590 875 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 PLA2G4DQ86XP0 818 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 C17orf53Q8N3J3 647 aaPredicted RBP6.63□□□□□ -1.35
VPS50-202ENST00000305866 ZNF831Q5JPB2 1677 aa6.63□□□□□ -1.35
VPS50-202ENST00000305866 CCDC171Q6TFL3 1326 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 ADD1P35611 737 aaKnown RBP6.62□□□□□ -1.35
VPS50-202ENST00000305866 IL17REQ8NFR9 667 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 MTMR6Q9Y217 621 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 R3HCC1Q9Y3T6 440 aaKnown RBP6.62□□□□□ -1.35
VPS50-202ENST00000305866 FANCGO15287 622 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 NECTIN1Q15223 517 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 EID1Q9Y6B2 187 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 TAF6LQ9Y6J9 622 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 GNAT3A8MTJ3 354 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 STAG3Q9UJ98 1225 aa6.62□□□□□ -1.35
VPS50-202ENST00000305866 ANKRD36CQ5JPF3 1778 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 ELL2O00472 640 aaPredicted RBP6.61□□□□□ -1.35
VPS50-202ENST00000305866 GNAI3P08754 354 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 LRP10Q7Z4F1 713 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 BCL2L12Q9HB09 334 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 CCDC39Q9UFE4 941 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 LRP5O75197 1615 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 F6X3S4 739 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 KDM4AO75164 1064 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 MX1P20591 662 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 CCDC30Q5VVM6 783 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 MAP7D2Q96T17 732 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 CPDO75976 1380 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 TIAM2Q8IVF5 1701 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 HMMRO75330 724 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 NOLC1Q14978 699 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS50-202ENST00000305866 TAF7Q15545 349 aaPredicted RBP6.61□□□□□ -1.35
VPS50-202ENST00000305866 ADCK5Q3MIX3 580 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 PRIMPOLQ96LW4 560 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 CNPY2Q9Y2B0 182 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 MRVI1Q9Y6F6 885 aa6.61□□□□□ -1.35
VPS50-202ENST00000305866 MBD3O95983 291 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 GNAI2P04899 355 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 EIF4A1P60842 406 aaKnown RBP6.6□□□□□ -1.35
VPS50-202ENST00000305866 NCBP1Q09161 790 aaKnown RBP6.6□□□□□ -1.35
VPS50-202ENST00000305866 SYCP1Q15431 976 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 RGS22Q8NE09 1264 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 UBXN6Q9BZV1 441 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 ZSWIM6Q9HCJ5 1215 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 ELP1O95163 1332 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 REC8O95072 547 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 SYT1P21579 422 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 ZNF830Q96NB3 372 aaPredicted RBP6.6□□□□□ -1.35
VPS50-202ENST00000305866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.6□□□□□ -1.352e-6■■■■□ 23.6
VPS50-202ENST00000305866 TTC41PQ6P2S7 1318 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 TNS2Q63HR2 1409 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 KCPQ6ZWJ8 1503 aa6.6□□□□□ -1.35
VPS50-202ENST00000305866 PTH1RQ03431 593 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 TSGA10IPQ3SY00 556 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 BEND3Q5T5X7 828 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 GDPD2Q9HCC8 539 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 C1orf167Q5SNV9 1468 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 BCL9LQ86UU0 1499 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 SALL1Q9NSC2 1324 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 MYH2Q9UKX2 1941 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 PALLDQ8WX93 1383 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 ZSCAN22P10073 491 aaPredicted RBP6.59□□□□□ -1.35
VPS50-202ENST00000305866 AK2P54819 239 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 FLIIQ13045 1269 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 NYAP1Q6ZVC0 841 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 KCNH5Q8NCM2 988 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 TSPY26PQ9H489 355 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 CTNNA3Q9UI47 895 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 PDIA4P13667 645 aaKnown RBP6.59□□□□□ -1.35
VPS50-202ENST00000305866 AKAP4Q5JQC9 854 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 USPL1Q5W0Q7 1092 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 NFATC2IPQ8NCF5 419 aa6.59□□□□□ -1.35
VPS50-202ENST00000305866 TTC12Q9H892 705 aaPredicted RBP6.59□□□□□ -1.35
VPS50-202ENST00000305866 MYH3P11055 1940 aa6.59□□□□□ -1.36
VPS50-202ENST00000305866 ALDH1L1O75891 902 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 F13A1P00488 732 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 TOB2Q14106 344 aaPredicted RBP6.58□□□□□ -1.36
VPS50-202ENST00000305866 IQCB1Q15051 598 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 CSPP1Q1MSJ5 1256 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 ILDR1Q86SU0 546 aaPredicted RBP6.58□□□□□ -1.36
VPS50-202ENST00000305866 ARHGEF25Q86VW2 580 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 TM6SF1Q9BZW5 370 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 HSD3B7Q9H2F3 369 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 USP25Q9UHP3 1055 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 EXOC6BQ9Y2D4 811 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 KDM6AO15550 1401 aaPredicted RBP6.58□□□□□ -1.36
VPS50-202ENST00000305866 ADCY5O95622 1261 aa6.58□□□□□ -1.36
VPS50-202ENST00000305866 SLC4A2P04920 1241 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms