RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 FLT4P35916 1363 aa19.11■□□□□ 0.65
BRD3-201ENST00000303407 CDR1P51861 262 aa19.11■□□□□ 0.65
BRD3-201ENST00000303407 CHRNA2Q15822 529 aa19.11■□□□□ 0.65
BRD3-201ENST00000303407 SLC12A7Q9Y666 1083 aa19.11■□□□□ 0.65
BRD3-201ENST00000303407 AKAP4Q5JQC9 854 aa19.1■□□□□ 0.65
BRD3-201ENST00000303407 ZBTB40Q9NUA8 1239 aa19.1■□□□□ 0.65
BRD3-201ENST00000303407 CKAP2LQ8IYA6 745 aa19.1■□□□□ 0.65
BRD3-201ENST00000303407 NEK1Q96PY6 1258 aa19.1■□□□□ 0.65
BRD3-201ENST00000303407 HMG20BQ9P0W2 317 aa19.1■□□□□ 0.65
BRD3-201ENST00000303407 CFAP100Q494V2 611 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 ODF2Q5BJF6 829 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 CEP85Q6P2H3 762 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 ANKRD13DQ6ZTN6 518 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 DEF6Q9H4E7 631 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 USP5P45974 858 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 ZPR1O75312 459 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 SNX21Q969T3 373 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 NPC1L1Q9UHC9 1359 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 SSRP1Q08945 709 aaKnown RBP19.09■□□□□ 0.65
BRD3-201ENST00000303407 KRT24Q2M2I5 525 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 KLHL40Q2TBA0 621 aa19.09■□□□□ 0.65
BRD3-201ENST00000303407 GOLGA8AA7E2F4 631 aa19.08■□□□□ 0.65
BRD3-201ENST00000303407 ZSCAN23Q3MJ62 389 aa19.08■□□□□ 0.65
BRD3-201ENST00000303407 USP25Q9UHP3 1055 aa19.08■□□□□ 0.65
BRD3-201ENST00000303407 CCDC196A0A1B0GTZ2 297 aa19.08■□□□□ 0.64
BRD3-201ENST00000303407 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
BRD3-201ENST00000303407 SNRKQ9NRH2 765 aa19.08■□□□□ 0.64
BRD3-201ENST00000303407 XAGE3Q8WTP9 111 aa19.07■□□□□ 0.64
BRD3-201ENST00000303407 TFIP11Q9UBB9 837 aaKnown RBP19.07■□□□□ 0.64
BRD3-201ENST00000303407 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
BRD3-201ENST00000303407 MAP3K5Q99683 1374 aa19.07■□□□□ 0.64
BRD3-201ENST00000303407 TTF1Q15361 905 aaPredicted RBP19.07■□□□□ 0.64
BRD3-201ENST00000303407 CTAGE5O15320 804 aa19.07■□□□□ 0.64
BRD3-201ENST00000303407 DDX19AQ9NUU7 478 aaKnown RBP19.07■□□□□ 0.64
BRD3-201ENST00000303407 NCKAP5LQ9HCH0 1330 aa19.07■□□□□ 0.64
BRD3-201ENST00000303407 ZSCAN29Q8IWY8 852 aaPredicted RBP19.07■□□□□ 0.64
BRD3-201ENST00000303407 DCTPP1Q9H773 170 aa19.07■□□□□ 0.64
BRD3-201ENST00000303407 IFIT3O14879 490 aaKnown RBP19.06■□□□□ 0.64
BRD3-201ENST00000303407 ALDH1L1O75891 902 aa19.06■□□□□ 0.64
BRD3-201ENST00000303407 ADAMTS2O95450 1211 aa19.06■□□□□ 0.64
BRD3-201ENST00000303407 SLC39A6Q13433 755 aa19.06■□□□□ 0.64
BRD3-201ENST00000303407 ZFYVE27Q5T4F4 411 aa19.06■□□□□ 0.64
BRD3-201ENST00000303407 CLIP2Q9UDT6 1046 aa19.06■□□□□ 0.64
BRD3-201ENST00000303407 RANBP6O60518 1105 aaKnown RBP19.06■□□□□ 0.64
BRD3-201ENST00000303407 KSR2Q6VAB6 950 aa19.06■□□□□ 0.64
BRD3-201ENST00000303407 CCDC82Q8N4S0 544 aa19.06■□□□□ 0.64
BRD3-201ENST00000303407 FSIP1Q8NA03 581 aa19.06■□□□□ 0.64
BRD3-201ENST00000303407 EXOC5O00471 708 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 POLR3DP05423 398 aaPredicted RBP19.05■□□□□ 0.64
BRD3-201ENST00000303407 SSBP05455 408 aaKnown RBP eCLIP19.05■□□□□ 0.64
BRD3-201ENST00000303407 ZSCAN22P10073 491 aaPredicted RBP19.05■□□□□ 0.64
BRD3-201ENST00000303407 LDHAL6AQ6ZMR3 332 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 LRRC59Q96AG4 307 aaKnown RBP19.05■□□□□ 0.64
BRD3-201ENST00000303407 MSH6P52701 1360 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 PATL2C9JE40 543 aaKnown RBP19.05■□□□□ 0.64
BRD3-201ENST00000303407 GRM8O00222 908 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 HAND2P61296 217 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 UBE2HP62256 183 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 DZIP1Q86YF9 867 aaKnown RBP19.05■□□□□ 0.64
BRD3-201ENST00000303407 ANKIB1Q9P2G1 1089 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 MKNK2Q9HBH9 465 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 SYCP1Q15431 976 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 DDX46Q7L014 1031 aaKnown RBP19.05■□□□□ 0.64
BRD3-201ENST00000303407 COPS6Q7L5N1 327 aa19.05■□□□□ 0.64
BRD3-201ENST00000303407 RNF41Q9H4P4 317 aaPredicted RBP19.05■□□□□ 0.64
BRD3-201ENST00000303407 TRPM2O94759 1503 aa19.04■□□□□ 0.64
BRD3-201ENST00000303407 SEC24BO95487 1268 aa19.04■□□□□ 0.64
BRD3-201ENST00000303407 ANAPC15P60006 121 aa19.04■□□□□ 0.64
BRD3-201ENST00000303407 NECAB1Q8N987 351 aa19.04■□□□□ 0.64
BRD3-201ENST00000303407 ZNF287Q9HBT7 754 aa19.04■□□□□ 0.64
BRD3-201ENST00000303407 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
BRD3-201ENST00000303407 MYO6Q9UM54 1294 aa19.04■□□□□ 0.64
BRD3-201ENST00000303407 USP16Q9Y5T5 823 aa19.04■□□□□ 0.64
BRD3-201ENST00000303407 BMP2KQ9NSY1 1161 aaPredicted RBP19.03■□□□□ 0.64
BRD3-201ENST00000303407 SEC63Q9UGP8 760 aaKnown RBP19.03■□□□□ 0.64
BRD3-201ENST00000303407 MPHOSPH10O00566 681 aaKnown RBP19.03■□□□□ 0.64
BRD3-201ENST00000303407 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
BRD3-201ENST00000303407 EYA1Q99502 592 aa19.03■□□□□ 0.64
BRD3-201ENST00000303407 CTCFLQ8NI51 663 aaPredicted RBP19.03■□□□□ 0.64
BRD3-201ENST00000303407 LUC7LQ9NQ29 371 aaKnown RBP19.03■□□□□ 0.64
BRD3-201ENST00000303407 ARHGEF5Q12774 1597 aa19.03■□□□□ 0.64
BRD3-201ENST00000303407 CCDC181Q5TID7 509 aa19.03■□□□□ 0.64
BRD3-201ENST00000303407 PLEKHM2Q8IWE5 1019 aa19.03■□□□□ 0.64
BRD3-201ENST00000303407 RBM8AQ9Y5S9 174 aaKnown RBP19.03■□□□□ 0.64
BRD3-201ENST00000303407 SFPQP23246 707 aaKnown RBP eCLIP19.03■□□□□ 0.641e-9■■■■□ 23
BRD3-201ENST00000303407 NOM1Q5C9Z4 860 aaKnown RBP19.03■□□□□ 0.64
BRD3-201ENST00000303407 IQCA1Q86XH1 822 aa19.02■□□□□ 0.64
BRD3-201ENST00000303407 TXLNBQ8N3L3 684 aa19.02■□□□□ 0.64
BRD3-201ENST00000303407 KDM5AP29375 1690 aaKnown RBP19.02■□□□□ 0.64
BRD3-201ENST00000303407 EPB41L2O43491 1005 aaKnown RBP19.02■□□□□ 0.64
BRD3-201ENST00000303407 NCOA7Q8NI08 942 aa19.02■□□□□ 0.64
BRD3-201ENST00000303407 PHAXQ9H814 394 aaKnown RBP19.02■□□□□ 0.64
BRD3-201ENST00000303407 PA2G4Q9UQ80 394 aaKnown RBP19.02■□□□□ 0.64
BRD3-201ENST00000303407 ADCY5O95622 1261 aa19.02■□□□□ 0.63
BRD3-201ENST00000303407 TMEM67Q5HYA8 995 aa19.02■□□□□ 0.63
BRD3-201ENST00000303407 CADPS2Q86UW7 1296 aa19.02■□□□□ 0.63
BRD3-201ENST00000303407 RAB11FIP4Q86YS3 637 aa19.02■□□□□ 0.63
BRD3-201ENST00000303407 SKIDA1Q1XH10 827 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 PPFIA3O75145 1194 aa19.01■□□□□ 0.63
BRD3-201ENST00000303407 HOXC9P31274 260 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms