RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SSFA2P28290 1259 aa12.12□□□□□ -0.47
RFX3-201ENST00000302303 KSR2Q6VAB6 950 aa12.12□□□□□ -0.47
RFX3-201ENST00000302303 ATF7IPQ6VMQ6 1270 aa12.12□□□□□ -0.47
RFX3-201ENST00000302303 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
RFX3-201ENST00000302303 PLBD2Q8NHP8 589 aa12.12□□□□□ -0.47
RFX3-201ENST00000302303 FRAT1Q92837 279 aaPredicted RBP12.12□□□□□ -0.47
RFX3-201ENST00000302303 AK7Q96M32 723 aa12.12□□□□□ -0.47
RFX3-201ENST00000302303 PDGFDQ9GZP0 370 aaPredicted RBP12.12□□□□□ -0.47
RFX3-201ENST00000302303 MAP3K15Q6ZN16 1313 aa12.12□□□□□ -0.47
RFX3-201ENST00000302303 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
RFX3-201ENST00000302303 DZIP3Q86Y13 1208 aaKnown RBP12.11□□□□□ -0.47
RFX3-201ENST00000302303 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
RFX3-201ENST00000302303 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 ABCC4O15439 1325 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 ERVV-1B6SEH8 477 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 PHF14O94880 888 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 FKBP5Q13451 457 aaPredicted RBP12.11□□□□□ -0.47
RFX3-201ENST00000302303 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 ZKSCAN2Q63HK3 967 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 ZBTB3Q9H5J0 574 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 NARFQ9UHQ1 456 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 MAP3K2Q9Y2U5 619 aa12.11□□□□□ -0.47
RFX3-201ENST00000302303 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
RFX3-201ENST00000302303 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
RFX3-201ENST00000302303 IGKV5-2P06315 115 aa12.1□□□□□ -0.47
RFX3-201ENST00000302303 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
RFX3-201ENST00000302303 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
RFX3-201ENST00000302303 PANK1Q8TE04 598 aa12.1□□□□□ -0.47
RFX3-201ENST00000302303 CLUAP1Q96AJ1 413 aa12.1□□□□□ -0.47
RFX3-201ENST00000302303 METTL22Q9BUU2 404 aaPredicted RBP12.1□□□□□ -0.47
RFX3-201ENST00000302303 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
RFX3-201ENST00000302303 IPO8O15397 1037 aaKnown RBP12.09□□□□□ -0.47
RFX3-201ENST00000302303 GYS1P13807 737 aa12.09□□□□□ -0.47
RFX3-201ENST00000302303 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
RFX3-201ENST00000302303 USPL1Q5W0Q7 1092 aa12.09□□□□□ -0.47
RFX3-201ENST00000302303 DNAAF4Q8WXU2 420 aa12.09□□□□□ -0.47
RFX3-201ENST00000302303 ISCA1Q9BUE6 129 aa12.09□□□□□ -0.47
RFX3-201ENST00000302303 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
RFX3-201ENST00000302303 QSER1Q2KHR3 1735 aa12.09□□□□□ -0.47
RFX3-201ENST00000302303 BCORQ6W2J9 1755 aa12.08□□□□□ -0.48
RFX3-201ENST00000302303 A0A087WZG4 1122 aa12.08□□□□□ -0.48
RFX3-201ENST00000302303 RGL2O15211 777 aa12.08□□□□□ -0.48
RFX3-201ENST00000302303 TCIRG1Q13488 830 aa12.08□□□□□ -0.48
RFX3-201ENST00000302303 PDE3AQ14432 1141 aa12.08□□□□□ -0.48
RFX3-201ENST00000302303 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
RFX3-201ENST00000302303 ZNF34Q8IZ26 560 aa12.08□□□□□ -0.48
RFX3-201ENST00000302303 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
RFX3-201ENST00000302303 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
RFX3-201ENST00000302303 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
RFX3-201ENST00000302303 ATP10DQ9P241 1426 aa12.07□□□□□ -0.48
RFX3-201ENST00000302303 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
RFX3-201ENST00000302303 FKBP8Q14318 412 aa12.07□□□□□ -0.48
RFX3-201ENST00000302303 RIC3Q7Z5B4 369 aa12.07□□□□□ -0.48
RFX3-201ENST00000302303 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
RFX3-201ENST00000302303 SCN7AQ01118 1682 aa12.07□□□□□ -0.48
RFX3-201ENST00000302303 UBN2Q6ZU65 1347 aa12.07□□□□□ -0.48
RFX3-201ENST00000302303 NUP98P52948 1817 aa12.07□□□□□ -0.48
RFX3-201ENST00000302303 ATP5J2-PTCD1G3V325 749 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 TM4SF1P30408 202 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 RFC4P35249 363 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 TRIM28Q13263 835 aaKnown RBP12.06□□□□□ -0.48
RFX3-201ENST00000302303 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
RFX3-201ENST00000302303 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 CLEC4GQ6UXB4 293 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 KIF6Q6ZMV9 814 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 MYD88Q99836 296 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 SOCS7O14512 581 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 SLC4A10Q6U841 1118 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 ARXQ96QS3 562 aa12.06□□□□□ -0.48
RFX3-201ENST00000302303 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
RFX3-201ENST00000302303 PXDNLA1KZ92 1463 aa12.05□□□□□ -0.48
RFX3-201ENST00000302303 ZBTB7BO15156 539 aaPredicted RBP12.05□□□□□ -0.48
RFX3-201ENST00000302303 R3HDM1Q15032 1099 aaKnown RBP12.05□□□□□ -0.48
RFX3-201ENST00000302303 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
RFX3-201ENST00000302303 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
RFX3-201ENST00000302303 COG6Q9Y2V7 657 aa12.05□□□□□ -0.48
RFX3-201ENST00000302303 N4BP2Q86UW6 1770 aaPredicted RBP12.04□□□□□ -0.48
RFX3-201ENST00000302303 CASZ1Q86V15 1759 aa12.04□□□□□ -0.48
RFX3-201ENST00000302303 ZPR1O75312 459 aa12.04□□□□□ -0.48
RFX3-201ENST00000302303 CASP7P55210 303 aa12.04□□□□□ -0.48
RFX3-201ENST00000302303 IRX6P78412 446 aaPredicted RBP12.04□□□□□ -0.48
RFX3-201ENST00000302303 NFIXQ14938 502 aa12.04□□□□□ -0.48
RFX3-201ENST00000302303 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.04□□□□□ -0.48
RFX3-201ENST00000302303 ALDH1L1O75891 902 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 GPTP24298 496 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 CCT4P50991 539 aaKnown RBP12.03□□□□□ -0.48
RFX3-201ENST00000302303 DDR1Q08345 913 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 GCKRQ14397 625 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 MVPQ14764 893 aaKnown RBP12.03□□□□□ -0.48
RFX3-201ENST00000302303 SUSD4Q5VX71 490 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 CRBNQ96SW2 442 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 SRCIN1Q9C0H9 1055 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 UTYO14607 1347 aa12.03□□□□□ -0.48
RFX3-201ENST00000302303 ANKRD36CQ5JPF3 1778 aa12.02□□□□□ -0.48
RFX3-201ENST00000302303 H7C1W4 665 aa12.02□□□□□ -0.48
RFX3-201ENST00000302303 NBPF7P0C2Y1 421 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms