RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PTCD1O75127 700 aaKnown RBP26.74■■□□□ 1.87
TPM4-201ENST00000300933 SNRPA1P09661 255 aaKnown RBP26.74■■□□□ 1.87
TPM4-201ENST00000300933 PI4K2BQ8TCG2 481 aa26.74■■□□□ 1.87
TPM4-201ENST00000300933 LMTK3Q96Q04 1460 aa26.74■■□□□ 1.87
TPM4-201ENST00000300933 LARP1Q6PKG0 1096 aaKnown RBP26.73■■□□□ 1.87
TPM4-201ENST00000300933 N4BP2Q86UW6 1770 aaPredicted RBP26.73■■□□□ 1.87
TPM4-201ENST00000300933 ERBB4Q15303 1308 aa26.73■■□□□ 1.87
TPM4-201ENST00000300933 TNPO1Q92973 898 aaKnown RBP26.73■■□□□ 1.87
TPM4-201ENST00000300933 PKNOX2Q96KN3 472 aa26.73■■□□□ 1.87
TPM4-201ENST00000300933 ZCRB1Q8TBF4 217 aaKnown RBP26.72■■□□□ 1.87
TPM4-201ENST00000300933 FMNL2Q96PY5 1086 aa26.72■■□□□ 1.87
TPM4-201ENST00000300933 SCN11AQ9UI33 1791 aa26.72■■□□□ 1.87
TPM4-201ENST00000300933 CPDO75976 1380 aa26.72■■□□□ 1.87
TPM4-201ENST00000300933 EPHA10Q5JZY3 1008 aa26.72■■□□□ 1.87
TPM4-201ENST00000300933 NOL8Q76FK4 1167 aaKnown RBP26.72■■□□□ 1.87
TPM4-201ENST00000300933 WDR17Q8IZU2 1322 aa26.71■■□□□ 1.87
TPM4-201ENST00000300933 ANKRD13DQ6ZTN6 518 aa26.71■■□□□ 1.87
TPM4-201ENST00000300933 C5P01031 1676 aa26.71■■□□□ 1.87
TPM4-201ENST00000300933 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
TPM4-201ENST00000300933 CRYBG1Q9Y4K1 1723 aa26.71■■□□□ 1.87
TPM4-201ENST00000300933 SOS2Q07890 1332 aaPredicted RBP26.71■■□□□ 1.87
TPM4-201ENST00000300933 ESPNB1AK53 854 aa26.71■■□□□ 1.87
TPM4-201ENST00000300933 NEURL1BA8MQ27 555 aa26.7■■□□□ 1.86
TPM4-201ENST00000300933 EVA1CP58658 441 aa26.7■■□□□ 1.86
TPM4-201ENST00000300933 DDX11L8A8MPP1 907 aa26.7■■□□□ 1.86
TPM4-201ENST00000300933 NEXNQ0ZGT2 675 aa26.69■■□□□ 1.86
TPM4-201ENST00000300933 LRP10Q7Z4F1 713 aa26.69■■□□□ 1.86
TPM4-201ENST00000300933 NEK4P51957 841 aa26.68■■□□□ 1.86
TPM4-201ENST00000300933 ADAMTS7Q9UKP4 1686 aa26.68■■□□□ 1.86
TPM4-201ENST00000300933 GCKRQ14397 625 aa26.68■■□□□ 1.86
TPM4-201ENST00000300933 AK9Q5TCS8 1911 aa26.68■■□□□ 1.86
TPM4-201ENST00000300933 SSFA2P28290 1259 aa26.67■■□□□ 1.86
TPM4-201ENST00000300933 MTX1Q13505 466 aa26.67■■□□□ 1.86
TPM4-201ENST00000300933 CLASRPQ8N2M8 674 aaKnown RBP26.67■■□□□ 1.86
TPM4-201ENST00000300933 CCDC8Q9H0W5 538 aaPredicted RBP26.67■■□□□ 1.86
TPM4-201ENST00000300933 ZGPATQ8N5A5 531 aaKnown RBP26.67■■□□□ 1.86
TPM4-201ENST00000300933 TRIM44Q96DX7 344 aaPredicted RBP26.67■■□□□ 1.86
TPM4-201ENST00000300933 AACSQ86V21 672 aa26.66■■□□□ 1.86
TPM4-201ENST00000300933 METTL22Q9BUU2 404 aaPredicted RBP26.66■■□□□ 1.86
TPM4-201ENST00000300933 SASH1O94885 1247 aa26.66■■□□□ 1.86
TPM4-201ENST00000300933 A1BGP04217 495 aa26.65■■□□□ 1.86
TPM4-201ENST00000300933 PKP1Q13835 747 aa26.65■■□□□ 1.86
TPM4-201ENST00000300933 CWC27Q6UX04 472 aaKnown RBP26.65■■□□□ 1.86
TPM4-201ENST00000300933 GAS2L3Q86XJ1 694 aa26.65■■□□□ 1.86
TPM4-201ENST00000300933 HSP90AB4PQ58FF6 505 aa26.65■■□□□ 1.86
TPM4-201ENST00000300933 UBE3BQ7Z3V4 1068 aa26.65■■□□□ 1.86
TPM4-201ENST00000300933 UPF3BQ9BZI7 483 aaKnown RBP26.65■■□□□ 1.86
TPM4-201ENST00000300933 ZMYND15Q9H091 742 aa26.64■■□□□ 1.86
TPM4-201ENST00000300933 TLR7Q9NYK1 1049 aaKnown RBP26.64■■□□□ 1.86
TPM4-201ENST00000300933 NBPF26B4DH59 902 aa26.64■■□□□ 1.86
TPM4-201ENST00000300933 RRP9O43818 475 aaKnown RBP26.64■■□□□ 1.86
TPM4-201ENST00000300933 IFIT2P09913 472 aaKnown RBP26.64■■□□□ 1.86
TPM4-201ENST00000300933 NBPF14Q5TI25 921 aa26.64■■□□□ 1.86
TPM4-201ENST00000300933 NBPF10Q6P3W6 841 aaKnown RBP26.64■■□□□ 1.86
TPM4-201ENST00000300933 NBPF15Q8N660 670 aa26.64■■□□□ 1.86
TPM4-201ENST00000300933 ST18O60284 1047 aa26.63■■□□□ 1.85
TPM4-201ENST00000300933 IL2RBP14784 551 aa26.63■■□□□ 1.85
TPM4-201ENST00000300933 RAB3GAP1Q15042 981 aa26.63■■□□□ 1.85
TPM4-201ENST00000300933 ZNF330Q9Y3S2 320 aaPredicted RBP26.63■■□□□ 1.85
TPM4-201ENST00000300933 G3BP1Q13283 466 aaKnown RBP eCLIP26.62■■□□□ 1.855e-7■□□□□ 11.1
TPM4-201ENST00000300933 EAF2Q96CJ1 260 aaPredicted RBP26.62■■□□□ 1.85
TPM4-201ENST00000300933 TTLL7Q6ZT98 887 aa26.62■■□□□ 1.85
TPM4-201ENST00000300933 COL5A2P05997 1499 aaPredicted RBP26.62■■□□□ 1.85
TPM4-201ENST00000300933 PCDH11XQ9BZA7 1347 aa26.62■■□□□ 1.85
TPM4-201ENST00000300933 PCDH11YQ9BZA8 1340 aa26.62■■□□□ 1.85
TPM4-201ENST00000300933 KAT6BQ8WYB5 2073 aa26.61■■□□□ 1.85
TPM4-201ENST00000300933 TUBGCP6Q96RT7 1819 aa26.61■■□□□ 1.85
TPM4-201ENST00000300933 UTYO14607 1347 aa26.6■■□□□ 1.85
TPM4-201ENST00000300933 AOX1Q06278 1338 aa26.6■■□□□ 1.85
TPM4-201ENST00000300933 A0A087WZG4 1122 aa26.6■■□□□ 1.85
TPM4-201ENST00000300933 CNTROBQ8N137 903 aa26.6■■□□□ 1.85
TPM4-201ENST00000300933 ZBTB3Q9H5J0 574 aa26.59■■□□□ 1.85
TPM4-201ENST00000300933 ECHDC1Q9NTX5 307 aa26.59■■□□□ 1.85
TPM4-201ENST00000300933 CCDC9Q9Y3X0 531 aaKnown RBP26.59■■□□□ 1.85
TPM4-201ENST00000300933 FOXD4L5Q5VV16 416 aaPredicted RBP26.58■■□□□ 1.85
TPM4-201ENST00000300933 FOXD4L4Q8WXT5 416 aaPredicted RBP26.58■■□□□ 1.85
TPM4-201ENST00000300933 CARD10Q9BWT7 1032 aa26.58■■□□□ 1.85
TPM4-201ENST00000300933 LARP6Q9BRS8 491 aaKnown RBP26.58■■□□□ 1.85
TPM4-201ENST00000300933 BTG4Q9NY30 223 aa26.58■■□□□ 1.85
TPM4-201ENST00000300933 CIZ1Q9ULV3 898 aaPredicted RBP26.58■■□□□ 1.85
TPM4-201ENST00000300933 GLRX3O76003 335 aaKnown RBP26.57■■□□□ 1.84
TPM4-201ENST00000300933 CHAMP1Q96JM3 812 aa26.57■■□□□ 1.84
TPM4-201ENST00000300933 BOLA2Q9H3K6 86 aa26.56■■□□□ 1.84
TPM4-201ENST00000300933 CHMP3Q9Y3E7 222 aa26.56■■□□□ 1.84
TPM4-201ENST00000300933 SGSM2O43147 1006 aa26.56■■□□□ 1.84
TPM4-201ENST00000300933 MCCP23508 829 aa26.56■■□□□ 1.84
TPM4-201ENST00000300933 HDAC5Q9UQL6 1122 aa26.56■■□□□ 1.84
TPM4-201ENST00000300933 NDUFB9Q9Y6M9 179 aa26.56■■□□□ 1.84
TPM4-201ENST00000300933 PKD1L3Q7Z443 1732 aa26.55■■□□□ 1.84
TPM4-201ENST00000300933 ERC1Q8IUD2 1116 aa26.54■■□□□ 1.84
TPM4-201ENST00000300933 TMX3Q96JJ7 454 aa26.54■■□□□ 1.84
TPM4-201ENST00000300933 GBP4Q96PP9 640 aa26.54■■□□□ 1.84
TPM4-201ENST00000300933 EDC3Q96F86 508 aaKnown RBP26.54■■□□□ 1.84
TPM4-201ENST00000300933 MRC1P22897 1456 aa26.54■■□□□ 1.84
TPM4-201ENST00000300933 DTNBO60941 627 aa26.53■■□□□ 1.84
TPM4-201ENST00000300933 TTC41PQ6P2S7 1318 aa26.53■■□□□ 1.84
TPM4-201ENST00000300933 DIAPH3Q9NSV4 1193 aa26.53■■□□□ 1.84
TPM4-201ENST00000300933 CPA1P15085 419 aa26.52■■□□□ 1.84
TPM4-201ENST00000300933 RASEFQ8IZ41 740 aa26.52■■□□□ 1.84
TPM4-201ENST00000300933 PLBD2Q8NHP8 589 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms