RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
KDM1B-201ENST00000297792 SETD1AO15047 1707 aaKnown RBP17.17■□□□□ 0.34
KDM1B-201ENST00000297792 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
KDM1B-201ENST00000297792 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
KDM1B-201ENST00000297792 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 IGSF3O75054 1194 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 RAD50Q92878 1312 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 RAB11FIP3O75154 756 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
KDM1B-201ENST00000297792 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
KDM1B-201ENST00000297792 HOXC9P31274 260 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 FAM184AQ8NB25 1140 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 BICD2Q8TD16 824 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
KDM1B-201ENST00000297792 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.15■□□□□ 0.34
KDM1B-201ENST00000297792 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
KDM1B-201ENST00000297792 LUZP1Q86V48 1076 aa17.15■□□□□ 0.34
KDM1B-201ENST00000297792 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 PEAK1Q9H792 1746 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 FLT4P35916 1363 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 FAM227BQ96M60 508 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 KDM4AO75164 1064 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 DDX11Q96FC9 970 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
KDM1B-201ENST00000297792 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 PI4K2BQ8TCG2 481 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 TRIM5Q9C035 493 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 PYCARDQ9ULZ3 195 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 GPATCH3Q96I76 525 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
KDM1B-201ENST00000297792 LSG1Q9H089 658 aaKnown RBP17.13■□□□□ 0.33
KDM1B-201ENST00000297792 NDUFB9Q9Y6M9 179 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
KDM1B-201ENST00000297792 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 PIBF1Q8WXW3 757 aa17.13■□□□□ 0.33
KDM1B-201ENST00000297792 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
KDM1B-201ENST00000297792 PTGS1P23219 599 aa17.12■□□□□ 0.33
KDM1B-201ENST00000297792 STAP2Q9UGK3 403 aa17.12■□□□□ 0.33
KDM1B-201ENST00000297792 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
KDM1B-201ENST00000297792 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
KDM1B-201ENST00000297792 GLRX3O76003 335 aaKnown RBP17.12■□□□□ 0.33
KDM1B-201ENST00000297792 ME3Q16798 604 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 NUP62CLQ9H1M0 184 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
KDM1B-201ENST00000297792 C3P01024 1663 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 TERF1P54274 439 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
KDM1B-201ENST00000297792 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 EDC3Q96F86 508 aaKnown RBP17.11■□□□□ 0.33
KDM1B-201ENST00000297792 LRRC2Q9BYS8 371 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 IGSF1Q8N6C5 1336 aa17.11■□□□□ 0.33
KDM1B-201ENST00000297792 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 KRT85P78386 507 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 AGLP35573 1532 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 GOLGA6L6A8MZA4 724 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 LIG1P18858 919 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 MYRIPQ8NFW9 859 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 DACT1Q9NYF0 836 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 MTMR6Q9Y217 621 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 ZNF530Q6P9A1 599 aaPredicted RBP17.1■□□□□ 0.33
KDM1B-201ENST00000297792 ECHDC1Q9NTX5 307 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
KDM1B-201ENST00000297792 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
KDM1B-201ENST00000297792 LRMPQ12912 555 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.33
KDM1B-201ENST00000297792 LETM1O95202 739 aaPredicted RBP17.09■□□□□ 0.33
KDM1B-201ENST00000297792 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
KDM1B-201ENST00000297792 SPATA32Q96LK8 384 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 TECPR2O15040 1411 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 MON2Q7Z3U7 1717 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 H3BQV1 296 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 AP5Z1O43299 807 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 MYL6BP14649 208 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
KDM1B-201ENST00000297792 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.33
KDM1B-201ENST00000297792 UVSSAQ2YD98 709 aa17.08■□□□□ 0.32
KDM1B-201ENST00000297792 BLOC1S2Q6QNY1 142 aa17.08■□□□□ 0.32
KDM1B-201ENST00000297792 TPCN1Q9ULQ1 816 aa17.08■□□□□ 0.32
KDM1B-201ENST00000297792 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
KDM1B-201ENST00000297792 A0A087WWV3 80 aa17.08■□□□□ 0.32
KDM1B-201ENST00000297792 ANO6Q4KMQ2 910 aa17.08■□□□□ 0.32
KDM1B-201ENST00000297792 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.32
KDM1B-201ENST00000297792 TTC6Q86TZ1 520 aa17.08■□□□□ 0.32
KDM1B-201ENST00000297792 DNAJC2Q99543 621 aaKnown RBP17.08■□□□□ 0.32
KDM1B-201ENST00000297792 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
KDM1B-201ENST00000297792 NPHP1O15259 732 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms