RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ZNF592Q92610 1267 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 TBX22Q9Y458 520 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 CABP4P57796 275 aa18.97■□□□□ 0.63
SMAD6-201ENST00000288840 ZC3H13Q5T200 1668 aaKnown RBP18.97■□□□□ 0.63
SMAD6-201ENST00000288840 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
SMAD6-201ENST00000288840 CFAP74Q9C0B2 1584 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 APPP05067 770 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 FKBP4Q02790 459 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMAD6-201ENST00000288840 DDX46Q7L014 1031 aaKnown RBP18.96■□□□□ 0.63
SMAD6-201ENST00000288840 RBM8AQ9Y5S9 174 aaKnown RBP18.96■□□□□ 0.63
SMAD6-201ENST00000288840 USP6P35125 1406 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 PSMA5P28066 241 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 EIF4A1P60842 406 aaKnown RBP18.96■□□□□ 0.63
SMAD6-201ENST00000288840 SNX14Q9Y5W7 946 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 SYT1P21579 422 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 KRT28Q7Z3Y7 464 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 STK11IPQ8N1F8 1099 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 BICC1Q9H694 974 aaKnown RBP18.96■□□□□ 0.63
SMAD6-201ENST00000288840 PPLO60437 1756 aa18.96■□□□□ 0.63
SMAD6-201ENST00000288840 A0A087WZG4 1122 aa18.95■□□□□ 0.62
SMAD6-201ENST00000288840 TTC12Q9H892 705 aaPredicted RBP18.95■□□□□ 0.62
SMAD6-201ENST00000288840 COL3A1P02461 1466 aaPredicted RBP18.95■□□□□ 0.62
SMAD6-201ENST00000288840 RAB11FIP4Q86YS3 637 aa18.95■□□□□ 0.62
SMAD6-201ENST00000288840 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
SMAD6-201ENST00000288840 UQCRHLA0A096LP55 91 aa18.95■□□□□ 0.62
SMAD6-201ENST00000288840 UQCRHP07919 91 aa18.95■□□□□ 0.62
SMAD6-201ENST00000288840 NMIQ13287 307 aaPredicted RBP18.95■□□□□ 0.62
SMAD6-201ENST00000288840 GRM8O00222 908 aa18.94■□□□□ 0.62
SMAD6-201ENST00000288840 EVA1CP58658 441 aa18.94■□□□□ 0.62
SMAD6-201ENST00000288840 IP6K1Q92551 441 aa18.94■□□□□ 0.62
SMAD6-201ENST00000288840 ZBTB3Q9H5J0 574 aa18.94■□□□□ 0.62
SMAD6-201ENST00000288840 SNRKQ9NRH2 765 aa18.94■□□□□ 0.62
SMAD6-201ENST00000288840 PTH1RQ03431 593 aa18.94■□□□□ 0.62
SMAD6-201ENST00000288840 ZSCAN22P10073 491 aaPredicted RBP18.94■□□□□ 0.62
SMAD6-201ENST00000288840 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
SMAD6-201ENST00000288840 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 BECN2A8MW95 431 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 SGSM2O43147 1006 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 CCT2P78371 535 aaKnown RBP18.93■□□□□ 0.62
SMAD6-201ENST00000288840 KRT85P78386 507 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 KSR2Q6VAB6 950 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 C17orf53Q8N3J3 647 aaPredicted RBP18.93■□□□□ 0.62
SMAD6-201ENST00000288840 FMNL2Q96PY5 1086 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 TRIM5Q9C035 493 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 IL25Q9H293 177 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 ZDHHC9Q9Y397 364 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
SMAD6-201ENST00000288840 HTATSF1O43719 755 aaKnown RBP18.93■□□□□ 0.62
SMAD6-201ENST00000288840 AKAP4Q5JQC9 854 aa18.92■□□□□ 0.62
SMAD6-201ENST00000288840 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
SMAD6-201ENST00000288840 LARP1Q6PKG0 1096 aaKnown RBP18.92■□□□□ 0.62
SMAD6-201ENST00000288840 SASS6Q6UVJ0 657 aa18.92■□□□□ 0.62
SMAD6-201ENST00000288840 SPATA32Q96LK8 384 aa18.92■□□□□ 0.62
SMAD6-201ENST00000288840 GOLGA6L19H0YKK7 550 aa18.92■□□□□ 0.62
SMAD6-201ENST00000288840 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
SMAD6-201ENST00000288840 ANAPC15P60006 121 aa18.92■□□□□ 0.62
SMAD6-201ENST00000288840 ADCK5Q3MIX3 580 aa18.92■□□□□ 0.62
SMAD6-201ENST00000288840 ADCY5O95622 1261 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 CCDC129Q6ZRS4 1044 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 SSH3Q8TE77 659 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 CHST3Q7LGC8 479 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 EVI5LQ96CN4 794 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 SUCLG2Q96I99 432 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 TNMDQ9H2S6 317 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 MED14O60244 1454 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
SMAD6-201ENST00000288840 IBTKQ9P2D0 1353 aaPredicted RBP18.9■□□□□ 0.62
SMAD6-201ENST00000288840 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
SMAD6-201ENST00000288840 ARHGEF28Q8N1W1 1705 aaKnown RBP18.9■□□□□ 0.62
SMAD6-201ENST00000288840 CCDC183Q5T5S1 534 aa18.9■□□□□ 0.62
SMAD6-201ENST00000288840 ARHGEF10O15013 1369 aa18.9■□□□□ 0.62
SMAD6-201ENST00000288840 BRD1O95696 1058 aa18.9■□□□□ 0.62
SMAD6-201ENST00000288840 AK9Q5TCS8 1911 aa18.89■□□□□ 0.62
SMAD6-201ENST00000288840 GOLGA6L6A8MZA4 724 aa18.89■□□□□ 0.62
SMAD6-201ENST00000288840 GOLIM4O00461 696 aa18.89■□□□□ 0.62
SMAD6-201ENST00000288840 ANKRD13DQ6ZTN6 518 aa18.89■□□□□ 0.62
SMAD6-201ENST00000288840 BEND3Q5T5X7 828 aa18.89■□□□□ 0.61
SMAD6-201ENST00000288840 SIRT1Q96EB6 747 aa18.89■□□□□ 0.61
SMAD6-201ENST00000288840 MAP2P11137 1827 aaKnown RBP18.89■□□□□ 0.61
SMAD6-201ENST00000288840 CPLX1O14810 134 aa18.88■□□□□ 0.61
SMAD6-201ENST00000288840 HSPA4P34932 840 aa18.88■□□□□ 0.61
SMAD6-201ENST00000288840 F13A1P00488 732 aa18.88■□□□□ 0.61
SMAD6-201ENST00000288840 ZNF445P59923 1031 aa18.88■□□□□ 0.61
SMAD6-201ENST00000288840 HAND2P61296 217 aa18.88■□□□□ 0.61
SMAD6-201ENST00000288840 TLR7Q9NYK1 1049 aaKnown RBP18.88■□□□□ 0.61
SMAD6-201ENST00000288840 CREB3L3Q68CJ9 461 aa18.88■□□□□ 0.61
SMAD6-201ENST00000288840 NUP62CLQ9H1M0 184 aa18.88■□□□□ 0.61
SMAD6-201ENST00000288840 CCDC192P0DO97 292 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 PDCP20941 246 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 EAF2Q96CJ1 260 aaPredicted RBP18.87■□□□□ 0.61
SMAD6-201ENST00000288840 HIP1O00291 1037 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 HSP90AB3PQ58FF7 597 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 KIF24Q5T7B8 1368 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 LINS1Q8NG48 757 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 PRDM11Q9NQV5 511 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 ATP10DQ9P241 1426 aa18.87■□□□□ 0.61
SMAD6-201ENST00000288840 LARGE1O95461 756 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms