RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SCN7AQ01118 1682 aa25.67■■□□□ 1.7
TIMP4-201ENST00000287814 HNRNPUQ00839 825 aaKnown RBP eCLIP25.67■■□□□ 1.7
TIMP4-201ENST00000287814 COPS6Q7L5N1 327 aa25.67■■□□□ 1.7
TIMP4-201ENST00000287814 XAGE3Q8WTP9 111 aa25.67■■□□□ 1.7
TIMP4-201ENST00000287814 PARP3Q9Y6F1 533 aa25.67■■□□□ 1.7
TIMP4-201ENST00000287814 E9PSI1 815 aa25.66■■□□□ 1.7
TIMP4-201ENST00000287814 TCERG1O14776 1098 aaKnown RBP25.66■■□□□ 1.7
TIMP4-201ENST00000287814 VAMP4O75379 141 aa25.66■■□□□ 1.7
TIMP4-201ENST00000287814 AIMP1Q12904 312 aaKnown RBP25.66■■□□□ 1.7
TIMP4-201ENST00000287814 KLHL34Q8N239 644 aa25.66■■□□□ 1.7
TIMP4-201ENST00000287814 MAP3K15Q6ZN16 1313 aa25.66■■□□□ 1.7
TIMP4-201ENST00000287814 ZBTB3Q9H5J0 574 aa25.65■■□□□ 1.7
TIMP4-201ENST00000287814 CLEC4GQ6UXB4 293 aa25.64■■□□□ 1.7
TIMP4-201ENST00000287814 BCORQ6W2J9 1755 aa25.64■■□□□ 1.7
TIMP4-201ENST00000287814 ERVV-1B6SEH8 477 aa25.64■■□□□ 1.69
TIMP4-201ENST00000287814 CCDC30Q5VVM6 783 aa25.64■■□□□ 1.69
TIMP4-201ENST00000287814 KIF6Q6ZMV9 814 aa25.64■■□□□ 1.69
TIMP4-201ENST00000287814 TRMT2AQ8IZ69 625 aaKnown RBP25.63■■□□□ 1.69
TIMP4-201ENST00000287814 PHAXQ9H814 394 aaKnown RBP25.63■■□□□ 1.69
TIMP4-201ENST00000287814 HYPKQ9NX55 129 aa25.62■■□□□ 1.69
TIMP4-201ENST00000287814 NLGN2Q8NFZ4 835 aa25.61■■□□□ 1.69
TIMP4-201ENST00000287814 ZNF652Q9Y2D9 606 aa25.61■■□□□ 1.69
TIMP4-201ENST00000287814 RGL2O15211 777 aa25.61■■□□□ 1.69
TIMP4-201ENST00000287814 SERPINB2P05120 415 aa25.61■■□□□ 1.69
TIMP4-201ENST00000287814 SETDB2Q96T68 719 aa25.6■■□□□ 1.69
TIMP4-201ENST00000287814 CD2APQ9Y5K6 639 aa25.6■■□□□ 1.69
TIMP4-201ENST00000287814 GIGYF2Q6Y7W6 1299 aaKnown RBP25.59■■□□□ 1.69
TIMP4-201ENST00000287814 CHMP4AQ9BY43 222 aa25.58■■□□□ 1.69
TIMP4-201ENST00000287814 NIP7Q9Y221 180 aaKnown RBP eCLIP25.58■■□□□ 1.69
TIMP4-201ENST00000287814 C10orf71Q711Q0 1435 aa25.57■■□□□ 1.68
TIMP4-201ENST00000287814 CARMIL3Q8ND23 1372 aa25.57■■□□□ 1.68
TIMP4-201ENST00000287814 SLC4A2P04920 1241 aa25.56■■□□□ 1.68
TIMP4-201ENST00000287814 ANKRD13DQ6ZTN6 518 aa25.56■■□□□ 1.68
TIMP4-201ENST00000287814 G2E3Q7L622 706 aa25.56■■□□□ 1.68
TIMP4-201ENST00000287814 STK31Q9BXU1 1019 aa25.56■■□□□ 1.68
TIMP4-201ENST00000287814 GPTP24298 496 aa25.55■■□□□ 1.68
TIMP4-201ENST00000287814 CCDC24Q8N4L8 307 aa25.55■■□□□ 1.68
TIMP4-201ENST00000287814 PLBD2Q8NHP8 589 aa25.55■■□□□ 1.68
TIMP4-201ENST00000287814 NUP98P52948 1817 aa25.55■■□□□ 1.68
TIMP4-201ENST00000287814 ATP10DQ9P241 1426 aa25.55■■□□□ 1.68
TIMP4-201ENST00000287814 ZNF34Q8IZ26 560 aa25.55■■□□□ 1.68
TIMP4-201ENST00000287814 NRXN2Q9P2S2 1712 aa25.54■■□□□ 1.68
TIMP4-201ENST00000287814 AFDNP55196 1824 aaKnown RBP25.54■■□□□ 1.68
TIMP4-201ENST00000287814 UBN2Q6ZU65 1347 aa25.54■■□□□ 1.68
TIMP4-201ENST00000287814 PRR5LQ6MZQ0 368 aa25.54■■□□□ 1.68
TIMP4-201ENST00000287814 GOLGB1Q14789 3259 aaKnown RBP25.54■■□□□ 1.68
TIMP4-201ENST00000287814 FAM177BA6PVY3 158 aa25.53■■□□□ 1.68
TIMP4-201ENST00000287814 TCIRG1Q13488 830 aa25.51■■□□□ 1.67
TIMP4-201ENST00000287814 SUSD4Q5VX71 490 aa25.51■■□□□ 1.67
TIMP4-201ENST00000287814 NBPF5PQ86XG9 351 aaPredicted RBP25.51■■□□□ 1.67
TIMP4-201ENST00000287814 KIF13BQ9NQT8 1826 aa25.5■■□□□ 1.67
TIMP4-201ENST00000287814 ZBED9Q6R2W3 1325 aa25.5■■□□□ 1.67
TIMP4-201ENST00000287814 CNBD1Q8NA66 436 aa25.5■■□□□ 1.67
TIMP4-201ENST00000287814 A0A0G2JLW4 131 aa25.49■■□□□ 1.67
TIMP4-201ENST00000287814 RIC3Q7Z5B4 369 aa25.49■■□□□ 1.67
TIMP4-201ENST00000287814 PXDNLA1KZ92 1463 aa25.49■■□□□ 1.67
TIMP4-201ENST00000287814 TGFB2P61812 414 aa25.48■■□□□ 1.67
TIMP4-201ENST00000287814 DPEP1P16444 411 aa25.48■■□□□ 1.67
TIMP4-201ENST00000287814 FLIIQ13045 1269 aa25.48■■□□□ 1.67
TIMP4-201ENST00000287814 TPTE2Q6XPS3 522 aa25.48■■□□□ 1.67
TIMP4-201ENST00000287814 ZNF428Q96B54 188 aa25.48■■□□□ 1.67
TIMP4-201ENST00000287814 PI4KAP2A4QPH2 592 aa25.47■■□□□ 1.67
TIMP4-201ENST00000287814 ATP5J2-PTCD1G3V325 749 aa25.47■■□□□ 1.67
TIMP4-201ENST00000287814 KCNA3P22001 575 aa25.47■■□□□ 1.67
TIMP4-201ENST00000287814 HSP90AB3PQ58FF7 597 aa25.47■■□□□ 1.67
TIMP4-201ENST00000287814 PI4KAP1Q8N8J0 262 aa25.47■■□□□ 1.67
TIMP4-201ENST00000287814 WWC3Q9ULE0 1092 aa25.47■■□□□ 1.67
TIMP4-201ENST00000287814 UTRNP46939 3433 aa25.47■■□□□ 1.67
TIMP4-201ENST00000287814 KIAA1551Q9HCM1 1747 aa25.46■■□□□ 1.67
TIMP4-201ENST00000287814 CHRNA5P30532 468 aa25.46■■□□□ 1.67
TIMP4-201ENST00000287814 NLRP10Q86W26 655 aa25.46■■□□□ 1.67
TIMP4-201ENST00000287814 NUTM1Q86Y26 1132 aa25.46■■□□□ 1.67
TIMP4-201ENST00000287814 ISCA1Q9BUE6 129 aa25.46■■□□□ 1.67
TIMP4-201ENST00000287814 ADCY9O60503 1353 aa25.46■■□□□ 1.67
TIMP4-201ENST00000287814 NPHP1O15259 732 aa25.45■■□□□ 1.67
TIMP4-201ENST00000287814 NTSR2O95665 410 aa25.45■■□□□ 1.67
TIMP4-201ENST00000287814 KSR2Q6VAB6 950 aa25.45■■□□□ 1.67
TIMP4-201ENST00000287814 BRIP1Q9BX63 1249 aa25.45■■□□□ 1.67
TIMP4-201ENST00000287814 MAP3K2Q9Y2U5 619 aa25.45■■□□□ 1.67
TIMP4-201ENST00000287814 DDX58O95786 925 aaKnown RBP25.45■■□□□ 1.66
TIMP4-201ENST00000287814 PARP10Q53GL7 1025 aa25.45■■□□□ 1.66
TIMP4-201ENST00000287814 SSH1Q8WYL5 1049 aa25.45■■□□□ 1.66
TIMP4-201ENST00000287814 ERFEQ4G0M1 354 aa25.44■■□□□ 1.66
TIMP4-201ENST00000287814 N4BP2Q86UW6 1770 aaPredicted RBP25.44■■□□□ 1.66
TIMP4-201ENST00000287814 ST5P78524 1137 aa25.43■■□□□ 1.66
TIMP4-201ENST00000287814 MRPL50Q8N5N7 158 aaKnown RBP25.43■■□□□ 1.66
TIMP4-201ENST00000287814 MYD88Q99836 296 aa25.43■■□□□ 1.66
TIMP4-201ENST00000287814 METTL22Q9BUU2 404 aaPredicted RBP25.43■■□□□ 1.66
TIMP4-201ENST00000287814 ARFGEF2Q9Y6D5 1785 aa25.43■■□□□ 1.66
TIMP4-201ENST00000287814 FKBP5Q13451 457 aaPredicted RBP25.42■■□□□ 1.66
TIMP4-201ENST00000287814 PPP1R42Q7Z4L9 355 aa25.42■■□□□ 1.66
TIMP4-201ENST00000287814 BCL2L13Q9BXK5 485 aa25.42■■□□□ 1.66
TIMP4-201ENST00000287814 NYXQ9GZU5 481 aa25.42■■□□□ 1.66
TIMP4-201ENST00000287814 ANKRD31Q8N7Z5 1873 aa25.42■■□□□ 1.66
TIMP4-201ENST00000287814 ABCC12Q96J65 1359 aa25.42■■□□□ 1.66
TIMP4-201ENST00000287814 GTF2E1P29083 439 aaPredicted RBP25.42■■□□□ 1.66
TIMP4-201ENST00000287814 TRIM28Q13263 835 aaKnown RBP25.42■■□□□ 1.66
TIMP4-201ENST00000287814 SYNE4Q8N205 404 aa25.42■■□□□ 1.66
TIMP4-201ENST00000287814 UTP14AQ9BVJ6 771 aaKnown RBP25.42■■□□□ 1.66
TIMP4-201ENST00000287814 IBTKQ9P2D0 1353 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms