RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
PDE6D-201ENST00000287600 ZNF622Q969S3 477 aaKnown RBP eCLIP20.17■□□□□ 0.82
PDE6D-201ENST00000287600 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
PDE6D-201ENST00000287600 MYCNP04198 464 aaPredicted RBP20.16■□□□□ 0.82
PDE6D-201ENST00000287600 DZIP3Q86Y13 1208 aaKnown RBP20.16■□□□□ 0.82
PDE6D-201ENST00000287600 CNBD1Q8NA66 436 aa20.16■□□□□ 0.82
PDE6D-201ENST00000287600 SETDB2Q96T68 719 aa20.16■□□□□ 0.82
PDE6D-201ENST00000287600 BRIP1Q9BX63 1249 aa20.16■□□□□ 0.82
PDE6D-201ENST00000287600 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
PDE6D-201ENST00000287600 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
PDE6D-201ENST00000287600 FSTL1Q12841 308 aa20.15■□□□□ 0.82
PDE6D-201ENST00000287600 SPINK5Q9NQ38 1064 aaPredicted RBP20.15■□□□□ 0.82
PDE6D-201ENST00000287600 NFKBIEO00221 500 aa20.14■□□□□ 0.81
PDE6D-201ENST00000287600 PRELPP51888 382 aa20.14■□□□□ 0.81
PDE6D-201ENST00000287600 ST5P78524 1137 aa20.14■□□□□ 0.81
PDE6D-201ENST00000287600 IFFO2Q5TF58 517 aa20.14■□□□□ 0.81
PDE6D-201ENST00000287600 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
PDE6D-201ENST00000287600 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
PDE6D-201ENST00000287600 FER1L6Q2WGJ9 1857 aa20.13■□□□□ 0.81
PDE6D-201ENST00000287600 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
PDE6D-201ENST00000287600 PRAMEF22A3QJZ6 481 aa20.13■□□□□ 0.81
PDE6D-201ENST00000287600 NEFMP07197 916 aa20.13■□□□□ 0.81
PDE6D-201ENST00000287600 SNRPA1P09661 255 aaKnown RBP20.13■□□□□ 0.81
PDE6D-201ENST00000287600 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
PDE6D-201ENST00000287600 ARFGEF2Q9Y6D5 1785 aa20.13■□□□□ 0.81
PDE6D-201ENST00000287600 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
PDE6D-201ENST00000287600 C21orf2O43822 256 aa20.11■□□□□ 0.81
PDE6D-201ENST00000287600 SMC1BQ8NDV3 1235 aa20.11■□□□□ 0.81
PDE6D-201ENST00000287600 PNNQ9H307 717 aaKnown RBP20.11■□□□□ 0.81
PDE6D-201ENST00000287600 ZNF652Q9Y2D9 606 aa20.11■□□□□ 0.81
PDE6D-201ENST00000287600 DLG5Q8TDM6 1919 aa20.11■□□□□ 0.81
PDE6D-201ENST00000287600 DICER1Q9UPY3 1922 aaKnown RBP20.11■□□□□ 0.81
PDE6D-201ENST00000287600 HTRA3P83110 453 aa20.1■□□□□ 0.81
PDE6D-201ENST00000287600 SLX4Q8IY92 1834 aa20.09■□□□□ 0.81
PDE6D-201ENST00000287600 HTATSF1O43719 755 aaKnown RBP20.09■□□□□ 0.81
PDE6D-201ENST00000287600 NBPF5PQ86XG9 351 aaPredicted RBP20.09■□□□□ 0.81
PDE6D-201ENST00000287600 DNAJC5GQ8N7S2 189 aa20.09■□□□□ 0.81
PDE6D-201ENST00000287600 CNKSR1Q969H4 720 aa20.09■□□□□ 0.81
PDE6D-201ENST00000287600 PLEKHF1Q96S99 279 aa20.09■□□□□ 0.81
PDE6D-201ENST00000287600 ANP32CO43423 234 aa20.08■□□□□ 0.81
PDE6D-201ENST00000287600 VEGFAP15692 232 aaPredicted RBP20.08■□□□□ 0.81
PDE6D-201ENST00000287600 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.81
PDE6D-201ENST00000287600 STYK1Q6J9G0 422 aa20.08■□□□□ 0.81
PDE6D-201ENST00000287600 CLEC4GQ6UXB4 293 aa20.08■□□□□ 0.81
PDE6D-201ENST00000287600 KDM3BQ7LBC6 1761 aa20.08■□□□□ 0.8
PDE6D-201ENST00000287600 MAPK8IP3Q9UPT6 1336 aa20.07■□□□□ 0.8
PDE6D-201ENST00000287600 CAPN15O75808 1086 aa20.07■□□□□ 0.8
PDE6D-201ENST00000287600 SRGNP10124 158 aa20.07■□□□□ 0.8
PDE6D-201ENST00000287600 ERFEQ4G0M1 354 aa20.07■□□□□ 0.8
PDE6D-201ENST00000287600 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
PDE6D-201ENST00000287600 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
PDE6D-201ENST00000287600 TAF7Q15545 349 aaPredicted RBP20.06■□□□□ 0.8
PDE6D-201ENST00000287600 DPY19L2Q6NUT2 758 aa20.06■□□□□ 0.8
PDE6D-201ENST00000287600 MASTLQ96GX5 879 aa20.06■□□□□ 0.8
PDE6D-201ENST00000287600 LTBP3Q9NS15 1303 aa20.05■□□□□ 0.8
PDE6D-201ENST00000287600 NBPF26B4DH59 902 aa20.05■□□□□ 0.8
PDE6D-201ENST00000287600 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
PDE6D-201ENST00000287600 NBPF10Q6P3W6 841 aaKnown RBP20.05■□□□□ 0.8
PDE6D-201ENST00000287600 NBPF15Q8N660 670 aa20.05■□□□□ 0.8
PDE6D-201ENST00000287600 KLRG1Q96E93 195 aa20.05■□□□□ 0.8
PDE6D-201ENST00000287600 MIS18AQ9NYP9 233 aa20.04■□□□□ 0.8
PDE6D-201ENST00000287600 NIP7Q9Y221 180 aaKnown RBP eCLIP20.04■□□□□ 0.8
PDE6D-201ENST00000287600 NFE2L2Q16236 605 aa20.03■□□□□ 0.8
PDE6D-201ENST00000287600 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
PDE6D-201ENST00000287600 FAM177BA6PVY3 158 aa20.02■□□□□ 0.8
PDE6D-201ENST00000287600 RGL2O15211 777 aa20.02■□□□□ 0.8
PDE6D-201ENST00000287600 SAMD1Q6SPF0 538 aaPredicted RBP20.02■□□□□ 0.8
PDE6D-201ENST00000287600 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.8
PDE6D-201ENST00000287600 PNISRQ8TF01 805 aaKnown RBP20.02■□□□□ 0.8
PDE6D-201ENST00000287600 NPR1P16066 1061 aa20.01■□□□□ 0.79
PDE6D-201ENST00000287600 CCDC184Q52MB2 194 aa20.01■□□□□ 0.79
PDE6D-201ENST00000287600 TPTE2Q6XPS3 522 aa20.01■□□□□ 0.79
PDE6D-201ENST00000287600 CCDC93Q567U6 631 aa20■□□□□ 0.79
PDE6D-201ENST00000287600 POTECB2RU33 542 aa19.99■□□□□ 0.79
PDE6D-201ENST00000287600 GTF2E1P29083 439 aaPredicted RBP19.99■□□□□ 0.79
PDE6D-201ENST00000287600 HLFQ16534 295 aa19.99■□□□□ 0.79
PDE6D-201ENST00000287600 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
PDE6D-201ENST00000287600 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
PDE6D-201ENST00000287600 NUP98P52948 1817 aa19.98■□□□□ 0.79
PDE6D-201ENST00000287600 RIPK4P57078 832 aa19.98■□□□□ 0.79
PDE6D-201ENST00000287600 JMYQ8N9B5 988 aa19.98■□□□□ 0.79
PDE6D-201ENST00000287600 THUMPD2Q9BTF0 503 aaKnown RBP19.98■□□□□ 0.79
PDE6D-201ENST00000287600 KIF6Q6ZMV9 814 aa19.97■□□□□ 0.79
PDE6D-201ENST00000287600 RRP7AQ9Y3A4 280 aaKnown RBP19.97■□□□□ 0.79
PDE6D-201ENST00000287600 KLRG2A4D1S0 409 aaPredicted RBP19.96■□□□□ 0.79
PDE6D-201ENST00000287600 DDNO94850 711 aaPredicted RBP19.96■□□□□ 0.79
PDE6D-201ENST00000287600 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
PDE6D-201ENST00000287600 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
PDE6D-201ENST00000287600 ABCC12Q96J65 1359 aa19.95■□□□□ 0.79
PDE6D-201ENST00000287600 MYL6BP14649 208 aa19.95■□□□□ 0.78
PDE6D-201ENST00000287600 EIF4A1P60842 406 aaKnown RBP19.95■□□□□ 0.78
PDE6D-201ENST00000287600 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
PDE6D-201ENST00000287600 C7orf43Q8WVR3 580 aa19.95■□□□□ 0.78
PDE6D-201ENST00000287600 NYXQ9GZU5 481 aa19.95■□□□□ 0.78
PDE6D-201ENST00000287600 MAP3K15Q6ZN16 1313 aa19.95■□□□□ 0.78
PDE6D-201ENST00000287600 ERVV-1B6SEH8 477 aa19.94■□□□□ 0.78
PDE6D-201ENST00000287600 FKBP4Q02790 459 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDE6D-201ENST00000287600 SCN4AP35499 1836 aa19.94■□□□□ 0.78
PDE6D-201ENST00000287600 ALDH1B1P30837 517 aa19.93■□□□□ 0.78
PDE6D-201ENST00000287600 OLFM4Q6UX06 510 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms