RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CHMP4BQ9H444 224 aaKnown RBP23.9■■□□□ 1.42
PDLIM3-202ENST00000284770 HMGB2P26583 209 aaKnown RBP23.89■■□□□ 1.42
PDLIM3-202ENST00000284770 TXNRD1Q16881 649 aa23.89■■□□□ 1.42
PDLIM3-202ENST00000284770 PROM2Q8N271 834 aa23.89■■□□□ 1.42
PDLIM3-202ENST00000284770 MYH14Q7Z406 1995 aaKnown RBP23.89■■□□□ 1.42
PDLIM3-202ENST00000284770 ATP10DQ9P241 1426 aa23.89■■□□□ 1.41
PDLIM3-202ENST00000284770 TNS1Q9HBL0 1735 aaKnown RBP23.89■■□□□ 1.41
PDLIM3-202ENST00000284770 METTL22Q9BUU2 404 aaPredicted RBP23.88■■□□□ 1.41
PDLIM3-202ENST00000284770 SRCIN1Q9C0H9 1055 aa23.88■■□□□ 1.41
PDLIM3-202ENST00000284770 KIF6Q6ZMV9 814 aa23.88■■□□□ 1.41
PDLIM3-202ENST00000284770 CCDC136Q96JN2 1154 aa23.88■■□□□ 1.41
PDLIM3-202ENST00000284770 ZBTB40Q9NUA8 1239 aa23.87■■□□□ 1.41
PDLIM3-202ENST00000284770 TAF1LQ8IZX4 1826 aa23.87■■□□□ 1.41
PDLIM3-202ENST00000284770 NEXNQ0ZGT2 675 aa23.86■■□□□ 1.41
PDLIM3-202ENST00000284770 LINS1Q8NG48 757 aa23.86■■□□□ 1.41
PDLIM3-202ENST00000284770 ARXQ96QS3 562 aa23.86■■□□□ 1.41
PDLIM3-202ENST00000284770 ZBTB3Q9H5J0 574 aa23.86■■□□□ 1.41
PDLIM3-202ENST00000284770 MAP3K15Q6ZN16 1313 aa23.85■■□□□ 1.41
PDLIM3-202ENST00000284770 N4BP2Q86UW6 1770 aaPredicted RBP23.85■■□□□ 1.41
PDLIM3-202ENST00000284770 RPS6KA4O75676 772 aa23.85■■□□□ 1.41
PDLIM3-202ENST00000284770 DZIP3Q86Y13 1208 aaKnown RBP23.85■■□□□ 1.41
PDLIM3-202ENST00000284770 ALDH1L1O75891 902 aa23.84■■□□□ 1.41
PDLIM3-202ENST00000284770 MYD88Q99836 296 aa23.84■■□□□ 1.41
PDLIM3-202ENST00000284770 COL15A1P39059 1388 aa23.84■■□□□ 1.41
PDLIM3-202ENST00000284770 C4BP0C0L5 1744 aa23.84■■□□□ 1.41
PDLIM3-202ENST00000284770 ERVV-1B6SEH8 477 aa23.83■■□□□ 1.41
PDLIM3-202ENST00000284770 GNPATO15228 680 aa23.83■■□□□ 1.41
PDLIM3-202ENST00000284770 TBC1D2BQ9UPU7 963 aa23.83■■□□□ 1.41
PDLIM3-202ENST00000284770 ARFGEF2Q9Y6D5 1785 aa23.83■■□□□ 1.4
PDLIM3-202ENST00000284770 A0A087WZG4 1122 aa23.83■■□□□ 1.4
PDLIM3-202ENST00000284770 RTCBQ9Y3I0 505 aaKnown RBP23.83■■□□□ 1.4
PDLIM3-202ENST00000284770 IGKV5-2P06315 115 aa23.82■■□□□ 1.4
PDLIM3-202ENST00000284770 CWF19L2Q2TBE0 894 aaKnown RBP23.82■■□□□ 1.4
PDLIM3-202ENST00000284770 AK7Q96M32 723 aa23.82■■□□□ 1.4
PDLIM3-202ENST00000284770 MEIS3Q99687 375 aa23.82■■□□□ 1.4
PDLIM3-202ENST00000284770 NUP188Q5SRE5 1749 aa23.82■■□□□ 1.4
PDLIM3-202ENST00000284770 RGPD3A6NKT7 1758 aaPredicted RBP23.82■■□□□ 1.4
PDLIM3-202ENST00000284770 RGPD4Q7Z3J3 1758 aa23.82■■□□□ 1.4
PDLIM3-202ENST00000284770 SF3B2Q13435 895 aaKnown RBP23.81■■□□□ 1.4
PDLIM3-202ENST00000284770 GIGYF2Q6Y7W6 1299 aaKnown RBP23.81■■□□□ 1.4
PDLIM3-202ENST00000284770 USP44Q9H0E7 712 aa23.81■■□□□ 1.4
PDLIM3-202ENST00000284770 IBTKQ9P2D0 1353 aaPredicted RBP23.81■■□□□ 1.4
PDLIM3-202ENST00000284770 NEURL1BA8MQ27 555 aa23.8■■□□□ 1.4
PDLIM3-202ENST00000284770 TCIRG1Q13488 830 aa23.8■■□□□ 1.4
PDLIM3-202ENST00000284770 GNAI3P08754 354 aa23.79■■□□□ 1.4
PDLIM3-202ENST00000284770 HLFQ16534 295 aa23.79■■□□□ 1.4
PDLIM3-202ENST00000284770 CAMKK2Q96RR4 588 aa23.79■■□□□ 1.4
PDLIM3-202ENST00000284770 ATP5J2-PTCD1G3V325 749 aa23.78■■□□□ 1.4
PDLIM3-202ENST00000284770 CAMTA2O94983 1202 aa23.78■■□□□ 1.4
PDLIM3-202ENST00000284770 EN1Q05925 392 aaPredicted RBP23.78■■□□□ 1.4
PDLIM3-202ENST00000284770 HSP90AB3PQ58FF7 597 aa23.78■■□□□ 1.4
PDLIM3-202ENST00000284770 CCDC125Q86Z20 511 aa23.78■■□□□ 1.4
PDLIM3-202ENST00000284770 PCDHB15Q9Y5E8 787 aa23.78■■□□□ 1.4
PDLIM3-202ENST00000284770 BAG6P46379 1132 aa23.77■■□□□ 1.4
PDLIM3-202ENST00000284770 GCKRQ14397 625 aa23.77■■□□□ 1.4
PDLIM3-202ENST00000284770 AMIGO3Q86WK7 504 aa23.77■■□□□ 1.4
PDLIM3-202ENST00000284770 ISCA1Q9BUE6 129 aa23.77■■□□□ 1.4
PDLIM3-202ENST00000284770 TRIM28Q13263 835 aaKnown RBP23.76■■□□□ 1.39
PDLIM3-202ENST00000284770 EZH2Q15910 746 aaKnown RBP23.76■■□□□ 1.39
PDLIM3-202ENST00000284770 TRAPPC3LQ5T215 181 aa23.76■■□□□ 1.39
PDLIM3-202ENST00000284770 SMIM5Q71RC9 77 aa23.76■■□□□ 1.39
PDLIM3-202ENST00000284770 C9orf78Q9NZ63 289 aaPredicted RBP23.76■■□□□ 1.39
PDLIM3-202ENST00000284770 ADRA2BP18089 450 aa23.75■■□□□ 1.39
PDLIM3-202ENST00000284770 CCDC191Q8NCU4 936 aa23.75■■□□□ 1.39
PDLIM3-202ENST00000284770 ARHGEF1Q92888 912 aaKnown RBP23.75■■□□□ 1.39
PDLIM3-202ENST00000284770 C1orf115Q9H7X2 142 aa23.75■■□□□ 1.39
PDLIM3-202ENST00000284770 GRM8O00222 908 aa23.75■■□□□ 1.39
PDLIM3-202ENST00000284770 NBPF7P0C2Y1 421 aaPredicted RBP23.75■■□□□ 1.39
PDLIM3-202ENST00000284770 UBTFL1P0CB47 393 aaPredicted RBP23.75■■□□□ 1.39
PDLIM3-202ENST00000284770 NARFQ9UHQ1 456 aa23.75■■□□□ 1.39
PDLIM3-202ENST00000284770 UTYO14607 1347 aa23.74■■□□□ 1.39
PDLIM3-202ENST00000284770 RGL2O15211 777 aa23.74■■□□□ 1.39
PDLIM3-202ENST00000284770 GNAI2P04899 355 aa23.74■■□□□ 1.39
PDLIM3-202ENST00000284770 CWC25Q9NXE8 425 aaPredicted RBP23.74■■□□□ 1.39
PDLIM3-202ENST00000284770 SSFA2P28290 1259 aa23.73■■□□□ 1.39
PDLIM3-202ENST00000284770 CLEC4GQ6UXB4 293 aa23.73■■□□□ 1.39
PDLIM3-202ENST00000284770 AKT1S1Q96B36 256 aa23.73■■□□□ 1.39
PDLIM3-202ENST00000284770 ZNF652Q9Y2D9 606 aa23.73■■□□□ 1.39
PDLIM3-202ENST00000284770 PHF14O94880 888 aa23.73■■□□□ 1.39
PDLIM3-202ENST00000284770 KDM2BQ8NHM5 1336 aa23.72■■□□□ 1.39
PDLIM3-202ENST00000284770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.72■■□□□ 1.39
PDLIM3-202ENST00000284770 ZPR1O75312 459 aa23.72■■□□□ 1.39
PDLIM3-202ENST00000284770 ZNF34Q8IZ26 560 aa23.72■■□□□ 1.39
PDLIM3-202ENST00000284770 UBR3Q6ZT12 1888 aa23.71■■□□□ 1.39
PDLIM3-202ENST00000284770 RFC4P35249 363 aa23.71■■□□□ 1.39
PDLIM3-202ENST00000284770 ZNF827Q17R98 1081 aa23.71■■□□□ 1.39
PDLIM3-202ENST00000284770 DEFB132Q7Z7B7 95 aa23.71■■□□□ 1.39
PDLIM3-202ENST00000284770 HDAC5Q9UQL6 1122 aa23.71■■□□□ 1.39
PDLIM3-202ENST00000284770 NUP98P52948 1817 aa23.71■■□□□ 1.39
PDLIM3-202ENST00000284770 TFCP2L1Q9NZI6 479 aa23.7■■□□□ 1.39
PDLIM3-202ENST00000284770 BCORQ6W2J9 1755 aa23.7■■□□□ 1.38
PDLIM3-202ENST00000284770 GPTP24298 496 aa23.7■■□□□ 1.38
PDLIM3-202ENST00000284770 USPL1Q5W0Q7 1092 aa23.7■■□□□ 1.38
PDLIM3-202ENST00000284770 NLRP10Q86W26 655 aa23.7■■□□□ 1.38
PDLIM3-202ENST00000284770 LRRFIP2Q9Y608 721 aaKnown RBP23.7■■□□□ 1.38
PDLIM3-202ENST00000284770 AFDNP55196 1824 aaKnown RBP23.7■■□□□ 1.38
PDLIM3-202ENST00000284770 RPAP2Q8IXW5 612 aaPredicted RBP23.69■■□□□ 1.38
PDLIM3-202ENST00000284770 BCL2L12Q9HB09 334 aa23.69■■□□□ 1.38
PDLIM3-202ENST00000284770 SRP68Q9UHB9 627 aaKnown RBP23.69■■□□□ 1.38
PDLIM3-202ENST00000284770 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms