RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 STAP2Q9UGK3 403 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 CDV3Q9UKY7 258 aaKnown RBP4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 WASLO00401 505 aaPredicted RBP4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 ATP2B3Q16720 1220 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 SAMD7Q7Z3H4 446 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 DEFB128Q7Z7B8 93 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 NKX2-3Q8TAU0 364 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 NYXQ9GZU5 481 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 ZNF536O15090 1300 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 HAX1O00165 279 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 ACTN1P12814 892 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 PABPC4Q13310 644 aaKnown RBP eCLIP4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 WASHC4Q2M389 1173 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 CDC37L1Q7L3B6 337 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 CD99L2Q8TCZ2 262 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 EVC2Q86UK5 1308 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 PDE4BQ07343 736 aa4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 DZIP3Q86Y13 1208 aaKnown RBP4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 BCCIPQ9P287 314 aaKnown RBP eCLIP4.41□□□□□ -1.7
SEMA3D-201ENST00000284136 TRAF5O00463 557 aa4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 SERPINB2P05120 415 aa4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 RNASELQ05823 741 aaKnown RBP4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 AASDHQ4L235 1098 aaPredicted RBP4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 PPP2R2DQ66LE6 453 aa4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 IQSEC3Q9UPP2 1182 aaPredicted RBP4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 DDX58O95786 925 aaKnown RBP4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 MYL3P08590 195 aa4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 NOM1Q5C9Z4 860 aaKnown RBP4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 ARNTL2Q8WYA1 636 aa4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 RPGRIP1Q96KN7 1286 aa4.4□□□□□ -1.7
SEMA3D-201ENST00000284136 ANKRD30BQ9BXX2 1392 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 CAVIN4Q5BKX8 364 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 PRICKLE2Q7Z3G6 844 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 CKAP2LQ8IYA6 745 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 SMC4Q9NTJ3 1288 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 FYCO1Q9BQS8 1478 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 KMT5BQ4FZB7 885 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 USPL1Q5W0Q7 1092 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 RTKN2Q8IZC4 609 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 SPATA18Q8TC71 538 aa4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 FAM193BQ96PV7 902 aaPredicted RBP4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 EPRSP07814 1512 aaKnown RBP4.4□□□□□ -1.71
SEMA3D-201ENST00000284136 RGL2O15211 777 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 CCDC96Q2M329 555 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 KIAA0825Q8IV33 1275 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 NUDT16Q96DE0 195 aaKnown RBP4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 HOOK2Q96ED9 719 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 SLC52A1Q9NWF4 448 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 AOC3Q16853 763 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 RIMS1Q86UR5 1692 aaKnown RBP4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 RTEL1-TNFRSF6BF6WH68 1400 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 ANKRD30AQ9BXX3 1397 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 DCDC2CA8MYV0 355 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 DGLUCYQ7Z3D6 616 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 NOP9Q86U38 636 aaKnown RBP4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 UPF3BQ9BZI7 483 aaKnown RBP4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 SPTLC1O15269 473 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 NDUFV2P19404 249 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 GBP2P32456 591 aaPredicted RBP4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 ZNF76P36508 570 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 BCAMP50895 628 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 PTH1RQ03431 593 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 MTMR3Q13615 1198 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 KIAA1841Q6NSI8 718 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 UHRF1BP1LA0JNW5 1464 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 NBPF26B4DH59 902 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 RAB3GAP1Q15042 981 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 VPS72Q15906 364 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 SLC16A10Q8TF71 515 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 PIBF1Q8WXW3 757 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 TIMELESSQ9UNS1 1208 aa4.39□□□□□ -1.71
SEMA3D-201ENST00000284136 CCL15-CCL14A0A0B4J2E2 113 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 TRIM75PA6NK02 468 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 IDI1Q13907 227 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 CCL15Q16663 113 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 RRP12Q5JTH9 1297 aaKnown RBP4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 C1QTNF1Q9BXJ1 281 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 GGNBP2Q9H3C7 697 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 HOMER2Q9NSB8 354 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 CNPY2Q9Y2B0 182 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 KIF16BQ96L93 1317 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 BTBD11A6QL63 1104 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 DPYSL4O14531 572 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 GPCPD1Q9NPB8 672 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 SRP68Q9UHB9 627 aaKnown RBP4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 TONSLQ96HA7 1378 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 LPAL2Q16609 132 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 DIAPH1O60610 1272 aaKnown RBP4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 PPP2R5DQ14738 602 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 MICALL2Q8IY33 904 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 ANO3Q9BYT9 981 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 CNTLNQ9NXG0 1405 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 Q7L0L9 218 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 ATRIPQ8WXE1 791 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 CPA4Q9UI42 421 aa4.38□□□□□ -1.71
SEMA3D-201ENST00000284136 ALDH1A1P00352 501 aa4.37□□□□□ -1.71
SEMA3D-201ENST00000284136 SP3Q02447 781 aa4.37□□□□□ -1.71
SEMA3D-201ENST00000284136 KIF4BQ2VIQ3 1234 aa4.37□□□□□ -1.71
SEMA3D-201ENST00000284136 ZNF644Q9H582 1327 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms