RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 EVA1CP58658 441 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 CBX1P83916 185 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 CCDC40Q4G0X9 1142 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 ZNF365Q70YC5 407 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 AFAP1L2Q8N4X5 818 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 MSANTD4Q8NCY6 345 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 GOLGA1Q92805 767 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 OGFRQ9NZT2 677 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 RUSC2Q8N2Y8 1516 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 KRT86O43790 486 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 PLIN1O60240 522 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 CCDC114Q96M63 670 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 PPP1R2P41236 205 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 UBE2HP62256 183 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 MXRA7P84157 204 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 NUP133Q8WUM0 1156 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 LUC7L3O95232 432 aaKnown RBP6.25□□□□□ -1.41
XRN1-201ENST00000264951 HSP90AA5PQ58FG0 334 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 CSRNP2Q9H175 543 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 HYPKQ9NX55 129 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 AKNAQ7Z591 1439 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 CAPN2P17655 700 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 ATP2B1P20020 1258 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 HOXA7P31268 230 aaPredicted RBP6.25□□□□□ -1.41
XRN1-201ENST00000264951 SPAG5Q96R06 1193 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 RAI14Q9P0K7 980 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 ABCC11Q96J66 1382 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 RBM27Q9P2N5 1060 aaKnown RBP6.25□□□□□ -1.41
XRN1-201ENST00000264951 SYCE3A1L190 88 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 CTAGE9A4FU28 777 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 LARSQ9P2J5 1176 aaKnown RBP6.25□□□□□ -1.41
XRN1-201ENST00000264951 PDZRN3Q9UPQ7 1066 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 TTC39AQ5SRH9 613 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 TBC1D5Q92609 795 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 HMG20BQ9P0W2 317 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 FAN1Q9Y2M0 1017 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 RAD50Q92878 1312 aa6.25□□□□□ -1.41
XRN1-201ENST00000264951 PLEKHO1Q53GL0 409 aaPredicted RBP6.24□□□□□ -1.41
XRN1-201ENST00000264951 PPP1R9BQ96SB3 815 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 SMARCA2P51531 1590 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 ABCC8Q09428 1581 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 ELL2O00472 640 aaPredicted RBP6.24□□□□□ -1.41
XRN1-201ENST00000264951 NUF2Q9BZD4 464 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 TCP11L1Q9NUJ3 509 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 DNAJC5BQ9UF47 199 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 HFM1A2PYH4 1435 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 TSGA10Q9BZW7 698 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 PRC1O43663 620 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 ATF7IPQ6VMQ6 1270 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 TAOK1Q7L7X3 1001 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 ZMYND15Q9H091 742 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 ZHX3Q9H4I2 956 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 HNRNPMP52272 730 aaKnown RBP eCLIP6.24□□□□□ -1.41
XRN1-201ENST00000264951 HDXQ7Z353 690 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 CPLX4Q7Z7G2 160 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 CHD1LQ86WJ1 897 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 GPR161Q8N6U8 529 aaKnown RBP6.24□□□□□ -1.41
XRN1-201ENST00000264951 FAM76AQ8TAV0 307 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 IQCDQ96DY2 449 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 HAUS8Q9BT25 410 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 EIF2AQ9BY44 585 aaKnown RBP6.24□□□□□ -1.41
XRN1-201ENST00000264951 TNNC1P63316 161 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 TDRD12Q587J7 1177 aaKnown RBP6.24□□□□□ -1.41
XRN1-201ENST00000264951 TPD52P55327 224 aaPredicted RBP6.24□□□□□ -1.41
XRN1-201ENST00000264951 CEP57Q86XR8 500 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 SLF2Q8IX21 1173 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 GBP7Q8N8V2 638 aaPredicted RBP6.24□□□□□ -1.41
XRN1-201ENST00000264951 JADE2Q9NQC1 790 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 ZNF76P36508 570 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 PPFIA1Q13136 1202 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 CFAP157Q5JU67 520 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 ATRIPQ8WXE1 791 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 DAPK1P53355 1430 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 PDS5BQ9NTI5 1447 aa6.24□□□□□ -1.41
XRN1-201ENST00000264951 TAF7Q15545 349 aaPredicted RBP6.23□□□□□ -1.41
XRN1-201ENST00000264951 CAPZA3Q96KX2 299 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 NKIRAS1Q9NYS0 192 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 AKR1B10O60218 316 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 BAG4O95429 457 aaKnown RBP6.23□□□□□ -1.41
XRN1-201ENST00000264951 ERMNQ8TAM6 284 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 CALML4Q96GE6 196 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 ZMAT2Q96NC0 199 aaKnown RBP6.23□□□□□ -1.41
XRN1-201ENST00000264951 RAPGEF2Q9Y4G8 1499 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 RFC1P35251 1148 aaPredicted RBP6.23□□□□□ -1.41
XRN1-201ENST00000264951 ZNF165P49910 485 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 GNG11P61952 73 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 FYB2Q5VWT5 728 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 ATL3Q6DD88 541 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 FAM200AQ8TCP9 573 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 C16orf45Q96MC5 204 aaPredicted RBP6.23□□□□□ -1.41
XRN1-201ENST00000264951 Q9H521 79 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 RSPH14Q9UHP6 348 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 LIMCH1Q9UPQ0 1083 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 SOGA1O94964 1423 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 MYO1BO43795 1136 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 SMC1BQ8NDV3 1235 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 C8orf76Q96K31 380 aa6.23□□□□□ -1.41
XRN1-201ENST00000264951 MPHOSPH6Q99547 160 aaKnown RBP6.23□□□□□ -1.41
XRN1-201ENST00000264951 NEDD9Q14511 834 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms