RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 FLIIQ13045 1269 aa21.27■■□□□ 1
CHCHD3-201ENST00000262570 KIF6Q6ZMV9 814 aa21.27■■□□□ 1
CHCHD3-201ENST00000262570 MAP3K15Q6ZN16 1313 aa21.27■■□□□ 1
CHCHD3-201ENST00000262570 C4AP0C0L4 1744 aa21.27■■□□□ 1
CHCHD3-201ENST00000262570 ANKRD13DQ6ZTN6 518 aa21.27■□□□□ 0.99
CHCHD3-201ENST00000262570 BCL2L12Q9HB09 334 aa21.27■□□□□ 0.99
CHCHD3-201ENST00000262570 RGL2O15211 777 aa21.26■□□□□ 0.99
CHCHD3-201ENST00000262570 CLEC4GQ6UXB4 293 aa21.25■□□□□ 0.99
CHCHD3-201ENST00000262570 PLBD2Q8NHP8 589 aa21.25■□□□□ 0.99
CHCHD3-201ENST00000262570 ZBTB3Q9H5J0 574 aa21.25■□□□□ 0.99
CHCHD3-201ENST00000262570 CACNA1FO60840 1977 aa21.25■□□□□ 0.99
CHCHD3-201ENST00000262570 CASZ1Q86V15 1759 aa21.25■□□□□ 0.99
CHCHD3-201ENST00000262570 BCAR3O75815 825 aa21.24■□□□□ 0.99
CHCHD3-201ENST00000262570 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
CHCHD3-201ENST00000262570 HLFQ16534 295 aa21.24■□□□□ 0.99
CHCHD3-201ENST00000262570 FKBP5Q13451 457 aaPredicted RBP21.23■□□□□ 0.99
CHCHD3-201ENST00000262570 FKBP8Q14318 412 aa21.23■□□□□ 0.99
CHCHD3-201ENST00000262570 GIGYF2Q6Y7W6 1299 aaKnown RBP21.23■□□□□ 0.99
CHCHD3-201ENST00000262570 NLGN1Q8N2Q7 840 aa21.23■□□□□ 0.99
CHCHD3-201ENST00000262570 KSR2Q6VAB6 950 aa21.23■□□□□ 0.99
CHCHD3-201ENST00000262570 MTFR1LQ9H019 292 aa21.23■□□□□ 0.99
CHCHD3-201ENST00000262570 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
CHCHD3-201ENST00000262570 ZNF652Q9Y2D9 606 aa21.23■□□□□ 0.99
CHCHD3-201ENST00000262570 PI4KAP2A4QPH2 592 aa21.22■□□□□ 0.99
CHCHD3-201ENST00000262570 ZBTB7AO95365 584 aa21.22■□□□□ 0.99
CHCHD3-201ENST00000262570 RIC3Q7Z5B4 369 aa21.22■□□□□ 0.99
CHCHD3-201ENST00000262570 PI4KAP1Q8N8J0 262 aa21.22■□□□□ 0.99
CHCHD3-201ENST00000262570 PTPRCP08575 1304 aa21.21■□□□□ 0.99
CHCHD3-201ENST00000262570 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
CHCHD3-201ENST00000262570 MSL1Q68DK7 614 aa21.21■□□□□ 0.99
CHCHD3-201ENST00000262570 ADCY9O60503 1353 aa21.21■□□□□ 0.99
CHCHD3-201ENST00000262570 NOB1Q9ULX3 412 aaKnown RBP21.2■□□□□ 0.98
CHCHD3-201ENST00000262570 KIF16BQ96L93 1317 aa21.2■□□□□ 0.98
CHCHD3-201ENST00000262570 BCORQ6W2J9 1755 aa21.2■□□□□ 0.98
CHCHD3-201ENST00000262570 TM4SF1P30408 202 aa21.19■□□□□ 0.98
CHCHD3-201ENST00000262570 TBC1D9BQ66K14 1250 aa21.19■□□□□ 0.98
CHCHD3-201ENST00000262570 MAP3K2Q9Y2U5 619 aa21.19■□□□□ 0.98
CHCHD3-201ENST00000262570 TCIRG1Q13488 830 aa21.19■□□□□ 0.98
CHCHD3-201ENST00000262570 ATF5Q9Y2D1 282 aaPredicted RBP21.19■□□□□ 0.98
CHCHD3-201ENST00000262570 NFIXQ14938 502 aa21.18■□□□□ 0.98
CHCHD3-201ENST00000262570 HSP90AB3PQ58FF7 597 aa21.18■□□□□ 0.98
CHCHD3-201ENST00000262570 ARHGAP45Q92619 1136 aa21.18■□□□□ 0.98
CHCHD3-201ENST00000262570 METTL22Q9BUU2 404 aaPredicted RBP21.18■□□□□ 0.98
CHCHD3-201ENST00000262570 ATP10DQ9P241 1426 aa21.17■□□□□ 0.98
CHCHD3-201ENST00000262570 F6X3S4 739 aa21.17■□□□□ 0.98
CHCHD3-201ENST00000262570 ZNF34Q8IZ26 560 aa21.17■□□□□ 0.98
CHCHD3-201ENST00000262570 DNAAF4Q8WXU2 420 aa21.17■□□□□ 0.98
CHCHD3-201ENST00000262570 BICDL1Q6ZP65 573 aa21.16■□□□□ 0.98
CHCHD3-201ENST00000262570 NIP7Q9Y221 180 aaKnown RBP eCLIP21.16■□□□□ 0.98
CHCHD3-201ENST00000262570 IPO8O15397 1037 aaKnown RBP21.15■□□□□ 0.98
CHCHD3-201ENST00000262570 MMP10P09238 476 aa21.15■□□□□ 0.98
CHCHD3-201ENST00000262570 FRAT1Q92837 279 aaPredicted RBP21.15■□□□□ 0.98
CHCHD3-201ENST00000262570 SETDB2Q96T68 719 aa21.15■□□□□ 0.98
CHCHD3-201ENST00000262570 SGIP1Q9BQI5 828 aa21.15■□□□□ 0.98
CHCHD3-201ENST00000262570 NUP98P52948 1817 aa21.15■□□□□ 0.98
CHCHD3-201ENST00000262570 MYD88Q99836 296 aa21.14■□□□□ 0.98
CHCHD3-201ENST00000262570 ISCA1Q9BUE6 129 aa21.14■□□□□ 0.98
CHCHD3-201ENST00000262570 SPON1Q9HCB6 807 aa21.14■□□□□ 0.98
CHCHD3-201ENST00000262570 SRCAPQ6ZRS2 3230 aa21.14■□□□□ 0.98
CHCHD3-201ENST00000262570 POLRMTO00411 1230 aaKnown RBP21.14■□□□□ 0.97
CHCHD3-201ENST00000262570 GPTP24298 496 aa21.14■□□□□ 0.97
CHCHD3-201ENST00000262570 PTGER2P43116 358 aa21.14■□□□□ 0.97
CHCHD3-201ENST00000262570 DDR1Q08345 913 aa21.14■□□□□ 0.97
CHCHD3-201ENST00000262570 TRIM28Q13263 835 aaKnown RBP21.14■□□□□ 0.97
CHCHD3-201ENST00000262570 API5Q9BZZ5 524 aaKnown RBP21.14■□□□□ 0.97
CHCHD3-201ENST00000262570 UBN2Q6ZU65 1347 aa21.13■□□□□ 0.97
CHCHD3-201ENST00000262570 ARFGEF2Q9Y6D5 1785 aa21.13■□□□□ 0.97
CHCHD3-201ENST00000262570 ATP5J2-PTCD1G3V325 749 aa21.13■□□□□ 0.97
CHCHD3-201ENST00000262570 IGKV5-2P06315 115 aa21.13■□□□□ 0.97
CHCHD3-201ENST00000262570 NEXNQ0ZGT2 675 aa21.13■□□□□ 0.97
CHCHD3-201ENST00000262570 ATF7IPQ6VMQ6 1270 aa21.13■□□□□ 0.97
CHCHD3-201ENST00000262570 CARMIL3Q8ND23 1372 aa21.12■□□□□ 0.97
CHCHD3-201ENST00000262570 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
CHCHD3-201ENST00000262570 TRIM27P14373 513 aa21.12■□□□□ 0.97
CHCHD3-201ENST00000262570 PARP10Q53GL7 1025 aa21.12■□□□□ 0.97
CHCHD3-201ENST00000262570 BEND3Q5T5X7 828 aa21.12■□□□□ 0.97
CHCHD3-201ENST00000262570 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
CHCHD3-201ENST00000262570 NLRP10Q86W26 655 aa21.12■□□□□ 0.97
CHCHD3-201ENST00000262570 POLD1P28340 1107 aa21.11■□□□□ 0.97
CHCHD3-201ENST00000262570 PARP3Q9Y6F1 533 aa21.11■□□□□ 0.97
CHCHD3-201ENST00000262570 SERPINB2P05120 415 aa21.1■□□□□ 0.97
CHCHD3-201ENST00000262570 SLC4A10Q6U841 1118 aa21.1■□□□□ 0.97
CHCHD3-201ENST00000262570 LINS1Q8NG48 757 aa21.1■□□□□ 0.97
CHCHD3-201ENST00000262570 CWF19L2Q2TBE0 894 aaKnown RBP21.1■□□□□ 0.97
CHCHD3-201ENST00000262570 SUSD4Q5VX71 490 aa21.1■□□□□ 0.97
CHCHD3-201ENST00000262570 CCDC191Q8NCU4 936 aa21.1■□□□□ 0.97
CHCHD3-201ENST00000262570 NEURL1BA8MQ27 555 aa21.09■□□□□ 0.97
CHCHD3-201ENST00000262570 TNNQ9UQP3 1299 aa21.09■□□□□ 0.97
CHCHD3-201ENST00000262570 TPTE2Q6XPS3 522 aa21.08■□□□□ 0.97
CHCHD3-201ENST00000262570 PPP1R42Q7Z4L9 355 aa21.08■□□□□ 0.97
CHCHD3-201ENST00000262570 NBPF5PQ86XG9 351 aaPredicted RBP21.08■□□□□ 0.97
CHCHD3-201ENST00000262570 ABCC4O15439 1325 aa21.08■□□□□ 0.96
CHCHD3-201ENST00000262570 ANKRD36CQ5JPF3 1778 aa21.07■□□□□ 0.96
CHCHD3-201ENST00000262570 FAM177BA6PVY3 158 aa21.07■□□□□ 0.96
CHCHD3-201ENST00000262570 PLIN1O60240 522 aa21.07■□□□□ 0.96
CHCHD3-201ENST00000262570 NTSR2O95665 410 aa21.07■□□□□ 0.96
CHCHD3-201ENST00000262570 CLUAP1Q96AJ1 413 aa21.07■□□□□ 0.96
CHCHD3-201ENST00000262570 SRCIN1Q9C0H9 1055 aa21.07■□□□□ 0.96
CHCHD3-201ENST00000262570 CWC25Q9NXE8 425 aaPredicted RBP21.07■□□□□ 0.96
CHCHD3-201ENST00000262570 IBTKQ9P2D0 1353 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms