RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 PIGBQ92521 554 aa17.77■□□□□ 0.44
FOXF1-201ENST00000262426 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.43
FOXF1-201ENST00000262426 OS9Q13438 667 aaPredicted RBP17.77■□□□□ 0.43
FOXF1-201ENST00000262426 ACSBG1Q96GR2 724 aa17.77■□□□□ 0.43
FOXF1-201ENST00000262426 ESPNB1AK53 854 aa17.76■□□□□ 0.43
FOXF1-201ENST00000262426 PDE1AP54750 535 aa17.76■□□□□ 0.43
FOXF1-201ENST00000262426 KAZALD1Q96I82 304 aa17.76■□□□□ 0.43
FOXF1-201ENST00000262426 BICC1Q9H694 974 aaKnown RBP17.76■□□□□ 0.43
FOXF1-201ENST00000262426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.75■□□□□ 0.43
FOXF1-201ENST00000262426 GRM8O00222 908 aa17.75■□□□□ 0.43
FOXF1-201ENST00000262426 EPHA10Q5JZY3 1008 aa17.75■□□□□ 0.43
FOXF1-201ENST00000262426 LRP10Q7Z4F1 713 aa17.75■□□□□ 0.43
FOXF1-201ENST00000262426 RILPL2Q969X0 211 aa17.75■□□□□ 0.43
FOXF1-201ENST00000262426 NHSL1Q5SYE7 1610 aa17.75■□□□□ 0.43
FOXF1-201ENST00000262426 SIPA1L3O60292 1781 aaPredicted RBP17.75■□□□□ 0.43
FOXF1-201ENST00000262426 KIAA1211Q6ZU35 1233 aa17.75■□□□□ 0.43
FOXF1-201ENST00000262426 LINS1Q8NG48 757 aa17.75■□□□□ 0.43
FOXF1-201ENST00000262426 SSH3Q8TE77 659 aa17.75■□□□□ 0.43
FOXF1-201ENST00000262426 C5P01031 1676 aa17.74■□□□□ 0.43
FOXF1-201ENST00000262426 CACNA1FO60840 1977 aa17.74■□□□□ 0.43
FOXF1-201ENST00000262426 TRIM6-TRIM34B2RNG4 842 aa17.74■□□□□ 0.43
FOXF1-201ENST00000262426 ABCA3Q99758 1704 aa17.74■□□□□ 0.43
FOXF1-201ENST00000262426 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 EXOC5O00471 708 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 NEXNQ0ZGT2 675 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 UBE3BQ7Z3V4 1068 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 DNAJC10Q8IXB1 793 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 CHMP4AQ9BY43 222 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 NEURL1BA8MQ27 555 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 UNC5CLQ8IV45 518 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 EP400Q96L91 3159 aa17.73■□□□□ 0.43
FOXF1-201ENST00000262426 PRIM1P49642 420 aaKnown RBP17.72■□□□□ 0.43
FOXF1-201ENST00000262426 RHPN1Q8TCX5 695 aa17.72■□□□□ 0.43
FOXF1-201ENST00000262426 IBTKQ9P2D0 1353 aaPredicted RBP17.72■□□□□ 0.43
FOXF1-201ENST00000262426 MX1P20591 662 aa17.72■□□□□ 0.43
FOXF1-201ENST00000262426 C8orf37Q96NL8 207 aa17.71■□□□□ 0.43
FOXF1-201ENST00000262426 METTL22Q9BUU2 404 aaPredicted RBP17.71■□□□□ 0.43
FOXF1-201ENST00000262426 TOM1O60784 492 aa17.71■□□□□ 0.43
FOXF1-201ENST00000262426 CDC45O75419 566 aa17.71■□□□□ 0.43
FOXF1-201ENST00000262426 GCKRQ14397 625 aa17.71■□□□□ 0.43
FOXF1-201ENST00000262426 NKX1-1Q15270 411 aaPredicted RBP17.71■□□□□ 0.43
FOXF1-201ENST00000262426 LTBP4Q8N2S1 1624 aa17.71■□□□□ 0.43
FOXF1-201ENST00000262426 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
FOXF1-201ENST00000262426 BECN1Q14457 450 aa17.71■□□□□ 0.42
FOXF1-201ENST00000262426 ATG3Q9NT62 314 aa17.71■□□□□ 0.42
FOXF1-201ENST00000262426 A0A087WZG4 1122 aa17.7■□□□□ 0.42
FOXF1-201ENST00000262426 CHMP3Q9Y3E7 222 aa17.7■□□□□ 0.42
FOXF1-201ENST00000262426 ALDH1L1O75891 902 aa17.7■□□□□ 0.42
FOXF1-201ENST00000262426 POLA2Q14181 598 aa17.7■□□□□ 0.42
FOXF1-201ENST00000262426 CCDC85AQ96PX6 553 aaPredicted RBP17.7■□□□□ 0.42
FOXF1-201ENST00000262426 PKD1L3Q7Z443 1732 aa17.69■□□□□ 0.42
FOXF1-201ENST00000262426 ADAMTS7Q9UKP4 1686 aa17.69■□□□□ 0.42
FOXF1-201ENST00000262426 FAM182BQ5T319 152 aa17.69■□□□□ 0.42
FOXF1-201ENST00000262426 PXDNLA1KZ92 1463 aa17.68■□□□□ 0.42
FOXF1-201ENST00000262426 SLC4A9Q96Q91 983 aa17.68■□□□□ 0.42
FOXF1-201ENST00000262426 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
FOXF1-201ENST00000262426 PDE4CQ08493 712 aa17.68■□□□□ 0.42
FOXF1-201ENST00000262426 KCNQ4P56696 695 aa17.68■□□□□ 0.42
FOXF1-201ENST00000262426 FGD1P98174 961 aa17.68■□□□□ 0.42
FOXF1-201ENST00000262426 TRAK2O60296 914 aa17.67■□□□□ 0.42
FOXF1-201ENST00000262426 CCDC8Q9H0W5 538 aaPredicted RBP17.67■□□□□ 0.42
FOXF1-201ENST00000262426 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
FOXF1-201ENST00000262426 DDB1Q16531 1140 aa17.66■□□□□ 0.42
FOXF1-201ENST00000262426 NGLY1Q96IV0 654 aa17.66■□□□□ 0.42
FOXF1-201ENST00000262426 CD2BP2O95400 341 aaKnown RBP17.65■□□□□ 0.42
FOXF1-201ENST00000262426 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
FOXF1-201ENST00000262426 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 PRDM4Q9UKN5 801 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 ABCC6O95255 1503 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 BCL11BQ9C0K0 894 aaPredicted RBP17.65■□□□□ 0.42
FOXF1-201ENST00000262426 R3HCC1Q9Y3T6 440 aaKnown RBP17.65■□□□□ 0.42
FOXF1-201ENST00000262426 MRC1P22897 1456 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 KCNQ2O43526 872 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 GPTP24298 496 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 PDCL3Q9H2J4 239 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 GRPEL1Q9HAV7 217 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 PARP4Q9UKK3 1724 aaKnown RBP17.65■□□□□ 0.42
FOXF1-201ENST00000262426 SALL3Q9BXA9 1300 aa17.65■□□□□ 0.42
FOXF1-201ENST00000262426 GOLGB1Q14789 3259 aaKnown RBP17.65■□□□□ 0.42
FOXF1-201ENST00000262426 CERKQ8TCT0 537 aa17.64■□□□□ 0.41
FOXF1-201ENST00000262426 IL25Q9H293 177 aa17.64■□□□□ 0.41
FOXF1-201ENST00000262426 TLR7Q9NYK1 1049 aaKnown RBP17.64■□□□□ 0.41
FOXF1-201ENST00000262426 SASH1O94885 1247 aa17.64■□□□□ 0.41
FOXF1-201ENST00000262426 KIF2CQ99661 725 aa17.64■□□□□ 0.41
FOXF1-201ENST00000262426 MARCH10Q8NA82 808 aaPredicted RBP17.63■□□□□ 0.41
FOXF1-201ENST00000262426 SMIM5Q71RC9 77 aa17.63■□□□□ 0.41
FOXF1-201ENST00000262426 AACSQ86V21 672 aa17.63■□□□□ 0.41
FOXF1-201ENST00000262426 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
FOXF1-201ENST00000262426 NDUFB9Q9Y6M9 179 aa17.63■□□□□ 0.41
FOXF1-201ENST00000262426 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
FOXF1-201ENST00000262426 MCM4P33991 863 aa17.63■□□□□ 0.41
FOXF1-201ENST00000262426 LMBR1LQ6UX01 489 aa17.63■□□□□ 0.41
FOXF1-201ENST00000262426 FAM177BA6PVY3 158 aa17.62■□□□□ 0.41
FOXF1-201ENST00000262426 G3BP1Q13283 466 aaKnown RBP eCLIP17.62■□□□□ 0.41
FOXF1-201ENST00000262426 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
FOXF1-201ENST00000262426 ZBTB1Q9Y2K1 713 aa17.62■□□□□ 0.41
FOXF1-201ENST00000262426 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
FOXF1-201ENST00000262426 SHANK3Q9BYB0 1731 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms