RNA–Protein interactions for RNA: ENST00000262150.6

CDH19-201, Transcript of cadherin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH19, Length 6,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-201ENST00000262150 RBM17Q96I25 401 aaKnown RBP6.46□□□□□ -1.37
CDH19-201ENST00000262150 RICTORQ6R327 1708 aa6.46□□□□□ -1.37
CDH19-201ENST00000262150 RAB11FIP3O75154 756 aa6.46□□□□□ -1.37
CDH19-201ENST00000262150 CLEC11AQ9Y240 323 aa6.46□□□□□ -1.37
CDH19-201ENST00000262150 PTPRUQ92729 1446 aa6.46□□□□□ -1.37
CDH19-201ENST00000262150 IGSF1Q8N6C5 1336 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 KCNQ3O43525 872 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 SART3Q15020 963 aaKnown RBP6.46□□□□□ -1.38
CDH19-201ENST00000262150 AIDAQ96BJ3 306 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 H0YIN7 160 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 H3BQV1 296 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 SMARCA5O60264 1052 aaPredicted RBP6.46□□□□□ -1.38
CDH19-201ENST00000262150 VAMP4O75379 141 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 TDO2P48775 406 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 IFFO2Q5TF58 517 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 MRPL50Q8N5N7 158 aaKnown RBP6.46□□□□□ -1.38
CDH19-201ENST00000262150 PLBD2Q8NHP8 589 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 FAM89AQ96GI7 184 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 USP5P45974 858 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 SLKQ9H2G2 1235 aaPredicted RBP6.46□□□□□ -1.38
CDH19-201ENST00000262150 BOLA2Q9H3K6 86 aa6.46□□□□□ -1.38
CDH19-201ENST00000262150 HCLS1P14317 486 aaPredicted RBP6.45□□□□□ -1.38
CDH19-201ENST00000262150 GPR162Q16538 588 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 CHD1LQ86WJ1 897 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 CHL1O00533 1208 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 RIMBP2O15034 1052 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 C20orf194Q5TEA3 1177 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 ZC3H12CQ9C0D7 883 aaKnown RBP6.45□□□□□ -1.38
CDH19-201ENST00000262150 SH3TC1Q8TE82 1336 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 KIF24Q5T7B8 1368 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 EIF4A1P60842 406 aaKnown RBP6.45□□□□□ -1.38
CDH19-201ENST00000262150 TRIM29Q14134 588 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 CRACR2BQ8N4Y2 399 aaPredicted RBP6.45□□□□□ -1.38
CDH19-201ENST00000262150 IQSEC3Q9UPP2 1182 aaPredicted RBP6.45□□□□□ -1.38
CDH19-201ENST00000262150 MAP3K12Q12852 859 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 SLF2Q8IX21 1173 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 MEIS3Q99687 375 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 CRKLP46109 303 aaKnown RBP6.45□□□□□ -1.38
CDH19-201ENST00000262150 VPS72Q15906 364 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 C16orf71Q8IYS4 520 aaPredicted RBP6.45□□□□□ -1.38
CDH19-201ENST00000262150 SNRKQ9NRH2 765 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 TRIM35Q9UPQ4 493 aa6.45□□□□□ -1.38
CDH19-201ENST00000262150 F8W031 263 aaPredicted RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 HOXB7P09629 217 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 FOXD4L5Q5VV16 416 aaPredicted RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 MCTP1Q6DN14 999 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 FBXO41Q8TF61 875 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 FOXD4L4Q8WXT5 416 aaPredicted RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 ARHGAP45Q92619 1136 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 USP16Q9Y5T5 823 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 POLR3DP05423 398 aaPredicted RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 PDE4AP27815 886 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 HELBQ8NG08 1087 aaPredicted RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 BCS1LQ9Y276 419 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 ATF5Q9Y2D1 282 aaPredicted RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 SOS1Q07889 1333 aaPredicted RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 BLMP54132 1417 aaPredicted RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 MPHOSPH10O00566 681 aaKnown RBP6.44□□□□□ -1.38
CDH19-201ENST00000262150 MYO1BO43795 1136 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 MX1P20591 662 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 USPL1Q5W0Q7 1092 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 G2E3Q7L622 706 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 NLGN1Q8N2Q7 840 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 OGFOD1Q8N543 542 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 EYA3Q99504 573 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 KDM4AO75164 1064 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 ZNF804AQ7Z570 1209 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 PIGBQ92521 554 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 HDAC9Q9UKV0 1011 aa6.44□□□□□ -1.38
CDH19-201ENST00000262150 PSMA5P28066 241 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 RBM26Q5T8P6 1007 aaKnown RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 CWC27Q6UX04 472 aaKnown RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 METTL22Q9BUU2 404 aaPredicted RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 GLRX3O76003 335 aaKnown RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 LDHCP07864 332 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 PLCB2Q00722 1185 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 ATP2B3Q16720 1220 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 SF3A1Q15459 793 aaKnown RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 SOS2Q07890 1332 aaPredicted RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 CRB1P82279 1406 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 GIGYF1O75420 1035 aaPredicted RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 EN1Q05925 392 aaPredicted RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 ANP32EQ9BTT0 268 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 GJA3Q9Y6H8 435 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 NCOA3Q9Y6Q9 1424 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 LAMC1P11047 1609 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 FOSBP53539 338 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 GRM1Q13255 1194 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 SPTY2D1Q68D10 685 aaPredicted RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 CCDC191Q8NCU4 936 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 ANKRD2Q9GZV1 360 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 CPSF1Q10570 1443 aaKnown RBP6.43□□□□□ -1.38
CDH19-201ENST00000262150 TRPM1Q7Z4N2 1603 aa6.43□□□□□ -1.38
CDH19-201ENST00000262150 DIP2AQ14689 1571 aa6.42□□□□□ -1.38
CDH19-201ENST00000262150 PALLDQ8WX93 1383 aa6.42□□□□□ -1.38
CDH19-201ENST00000262150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.42□□□□□ -1.38
CDH19-201ENST00000262150 MINDY4BA8MYZ0 360 aa6.42□□□□□ -1.38
CDH19-201ENST00000262150 CYP27B1O15528 508 aa6.42□□□□□ -1.38
CDH19-201ENST00000262150 WDHD1O75717 1129 aaPredicted RBP6.42□□□□□ -1.38
CDH19-201ENST00000262150 LMOD1P29536 600 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms