RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 TNRQ92752 1358 aa16.69■□□□□ 0.26
TUBGCP3-201ENST00000261965 BTBD11A6QL63 1104 aa16.69■□□□□ 0.26
TUBGCP3-201ENST00000261965 FLT4P35916 1363 aa16.69■□□□□ 0.26
TUBGCP3-201ENST00000261965 GUCY1B3Q02153 619 aa16.69■□□□□ 0.26
TUBGCP3-201ENST00000261965 SETD1BQ9UPS6 1966 aaKnown RBP16.69■□□□□ 0.26
TUBGCP3-201ENST00000261965 SYT1P21579 422 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 PSME1Q06323 249 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 TULP1O00294 542 aaPredicted RBP16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 NOL7Q9UMY1 257 aaKnown RBP16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 STX6O43752 255 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 GJB2P29033 226 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 PTH1RQ03431 593 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 ADCK5Q3MIX3 580 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
TUBGCP3-201ENST00000261965 CRB1P82279 1406 aa16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 PREX1Q8TCU6 1659 aa16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 PLEKHG3A1L390 1219 aa16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 CLEC17AQ6ZS10 378 aa16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 MAP3K2Q9Y2U5 619 aa16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
TUBGCP3-201ENST00000261965 IBTKQ9P2D0 1353 aaPredicted RBP16.66■□□□□ 0.26
TUBGCP3-201ENST00000261965 KCNA6P17658 529 aa16.66■□□□□ 0.26
TUBGCP3-201ENST00000261965 EDC3Q96F86 508 aaKnown RBP16.66■□□□□ 0.26
TUBGCP3-201ENST00000261965 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
TUBGCP3-201ENST00000261965 TMX1Q9H3N1 280 aa16.66■□□□□ 0.26
TUBGCP3-201ENST00000261965 PROSER3Q2NL68 480 aa16.66■□□□□ 0.26
TUBGCP3-201ENST00000261965 LRRC2Q9BYS8 371 aa16.66■□□□□ 0.26
TUBGCP3-201ENST00000261965 LIMCH1Q9UPQ0 1083 aa16.66■□□□□ 0.26
TUBGCP3-201ENST00000261965 HMGN5P82970 282 aaKnown RBP16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 NBPF6Q5VWK0 638 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 RUFY3Q7L099 469 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 NBPF4Q96M43 638 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 FAM227BQ96M60 508 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 KNDC1Q76NI1 1749 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 SDF4Q9BRK5 362 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 SGSM2O43147 1006 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 ZSCAN22P10073 491 aaPredicted RBP16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 ISM2Q6H9L7 571 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 ZFP91Q96JP5 570 aaPredicted RBP16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 USP6P35125 1406 aa16.65■□□□□ 0.26
TUBGCP3-201ENST00000261965 KIF20BQ96Q89 1820 aa16.64■□□□□ 0.25
TUBGCP3-201ENST00000261965 C1orf141Q5JVX7 400 aa16.64■□□□□ 0.25
TUBGCP3-201ENST00000261965 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.64■□□□□ 0.25
TUBGCP3-201ENST00000261965 HSPA4P34932 840 aa16.64■□□□□ 0.25
TUBGCP3-201ENST00000261965 U2AF2P26368 475 aaKnown RBP eCLIP16.64■□□□□ 0.251e-6■■■■□ 23.7
TUBGCP3-201ENST00000261965 G3BP1Q13283 466 aaKnown RBP eCLIP16.64■□□□□ 0.25
TUBGCP3-201ENST00000261965 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
TUBGCP3-201ENST00000261965 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
TUBGCP3-201ENST00000261965 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
TUBGCP3-201ENST00000261965 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
TUBGCP3-201ENST00000261965 NRDCO43847 1150 aa16.63■□□□□ 0.25
TUBGCP3-201ENST00000261965 TNNT3P45378 269 aaPredicted RBP16.63■□□□□ 0.25
TUBGCP3-201ENST00000261965 CUL4AQ13619 759 aa16.63■□□□□ 0.25
TUBGCP3-201ENST00000261965 CCDC186Q7Z3E2 898 aa16.63■□□□□ 0.25
TUBGCP3-201ENST00000261965 RAB11FIP4Q86YS3 637 aa16.63■□□□□ 0.25
TUBGCP3-201ENST00000261965 LUZP1Q86V48 1076 aa16.63■□□□□ 0.25
TUBGCP3-201ENST00000261965 PTGS1P23219 599 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 CCDC183Q5T5S1 534 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 RIC3Q7Z5B4 369 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 NUP62CLQ9H1M0 184 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 SSH3Q8TE77 659 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 SBNO1A3KN83 1393 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 DYNC1I1O14576 645 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 ATP2B1P20020 1258 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 ANAPC15P60006 121 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 TTLL5Q6EMB2 1281 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 RUFY2Q8WXA3 655 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
TUBGCP3-201ENST00000261965 SMC2O95347 1197 aa16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 ZC3H6P61129 1189 aaKnown RBP16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 PI4K2BQ8TCG2 481 aa16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 ERCC4Q92889 916 aaPredicted RBP16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 MAP3K5Q99683 1374 aa16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 TOMM22Q9NS69 142 aa16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 F13A1P00488 732 aa16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 INTS4Q96HW7 963 aaKnown RBP16.61■□□□□ 0.25
TUBGCP3-201ENST00000261965 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 RAD50Q92878 1312 aa16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 KRT85P78386 507 aa16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 TNNT1P13805 278 aa16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 MTERF4Q7Z6M4 381 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 ECHDC1Q9NTX5 307 aa16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 TLR7Q9NYK1 1049 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 RBM8AQ9Y5S9 174 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-201ENST00000261965 A0A087WWV3 80 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms