RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 JAKMIP1Q96N16 626 aaKnown RBP15.63■□□□□ 0.09
SNX1-201ENST00000261889 NRBP1Q9UHY1 535 aa15.63■□□□□ 0.09
SNX1-201ENST00000261889 SMC3Q9UQE7 1217 aa15.63■□□□□ 0.09
SNX1-201ENST00000261889 SNX14Q9Y5W7 946 aa15.63■□□□□ 0.09
SNX1-201ENST00000261889 EYA1Q99502 592 aa15.62■□□□□ 0.09
SNX1-201ENST00000261889 USP44Q9H0E7 712 aa15.62■□□□□ 0.09
SNX1-201ENST00000261889 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.62■□□□□ 0.09
SNX1-201ENST00000261889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.62■□□□□ 0.09
SNX1-201ENST00000261889 V9GYY5 206 aaPredicted RBP15.62■□□□□ 0.09
SNX1-201ENST00000261889 C1orf167Q5SNV9 1468 aa15.62■□□□□ 0.09
SNX1-201ENST00000261889 NPHP1O15259 732 aa15.62■□□□□ 0.09
SNX1-201ENST00000261889 SYTL4Q96C24 671 aaPredicted RBP15.62■□□□□ 0.09
SNX1-201ENST00000261889 U2AF2P26368 475 aaKnown RBP eCLIP15.62■□□□□ 0.093e-7■■■■□ 21.1
SNX1-201ENST00000261889 GJB2P29033 226 aa15.62■□□□□ 0.09
SNX1-201ENST00000261889 DRC7Q8IY82 874 aa15.62■□□□□ 0.09
SNX1-201ENST00000261889 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
SNX1-201ENST00000261889 ZNF592Q92610 1267 aa15.62■□□□□ 0.09
SNX1-201ENST00000261889 EDC3Q96F86 508 aaKnown RBP15.62■□□□□ 0.09
SNX1-201ENST00000261889 STX6O43752 255 aa15.61■□□□□ 0.09
SNX1-201ENST00000261889 PTGS1P23219 599 aa15.61■□□□□ 0.09
SNX1-201ENST00000261889 C16orf45Q96MC5 204 aaPredicted RBP15.61■□□□□ 0.09
SNX1-201ENST00000261889 RPAP1Q9BWH6 1393 aaPredicted RBP15.61■□□□□ 0.09
SNX1-201ENST00000261889 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
SNX1-201ENST00000261889 DLG5Q8TDM6 1919 aa15.61■□□□□ 0.09
SNX1-201ENST00000261889 TTC21BQ7Z4L5 1316 aa15.6■□□□□ 0.09
SNX1-201ENST00000261889 KCNF1Q9H3M0 494 aa15.6■□□□□ 0.09
SNX1-201ENST00000261889 TAF7Q15545 349 aaPredicted RBP15.6■□□□□ 0.09
SNX1-201ENST00000261889 HDGFL1Q5TGJ6 251 aa15.6■□□□□ 0.09
SNX1-201ENST00000261889 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
SNX1-201ENST00000261889 CUL4AQ13619 759 aa15.59■□□□□ 0.09
SNX1-201ENST00000261889 NGDNQ8NEJ9 315 aaKnown RBP15.59■□□□□ 0.09
SNX1-201ENST00000261889 WDR33Q9C0J8 1336 aaKnown RBP15.59■□□□□ 0.09
SNX1-201ENST00000261889 CCT4P50991 539 aaKnown RBP15.59■□□□□ 0.09
SNX1-201ENST00000261889 AIMP1Q12904 312 aaKnown RBP15.59■□□□□ 0.09
SNX1-201ENST00000261889 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
SNX1-201ENST00000261889 SYAP1Q96A49 352 aaPredicted RBP15.59■□□□□ 0.09
SNX1-201ENST00000261889 LRRC2Q9BYS8 371 aa15.59■□□□□ 0.09
SNX1-201ENST00000261889 PRAMEF22A3QJZ6 481 aa15.59■□□□□ 0.09
SNX1-201ENST00000261889 ZSCAN22P10073 491 aaPredicted RBP15.59■□□□□ 0.09
SNX1-201ENST00000261889 LIG1P18858 919 aa15.59■□□□□ 0.09
SNX1-201ENST00000261889 CSPP1Q1MSJ5 1256 aa15.59■□□□□ 0.09
SNX1-201ENST00000261889 FAM227BQ96M60 508 aa15.59■□□□□ 0.09
SNX1-201ENST00000261889 PTPRCP08575 1304 aa15.58■□□□□ 0.09
SNX1-201ENST00000261889 ATP8B2P98198 1209 aa15.58■□□□□ 0.09
SNX1-201ENST00000261889 CCDC8Q9H0W5 538 aaPredicted RBP15.58■□□□□ 0.09
SNX1-201ENST00000261889 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.09
SNX1-201ENST00000261889 USP6P35125 1406 aa15.58■□□□□ 0.09
SNX1-201ENST00000261889 EDC4Q6P2E9 1401 aaKnown RBP15.58■□□□□ 0.09
SNX1-201ENST00000261889 PI4KAP2A4QPH2 592 aa15.58■□□□□ 0.08
SNX1-201ENST00000261889 DYNC1I1O14576 645 aa15.58■□□□□ 0.08
SNX1-201ENST00000261889 RIOK3O14730 519 aaKnown RBP15.58■□□□□ 0.08
SNX1-201ENST00000261889 PI4KAP1Q8N8J0 262 aa15.58■□□□□ 0.08
SNX1-201ENST00000261889 RHPN1Q8TCX5 695 aa15.58■□□□□ 0.08
SNX1-201ENST00000261889 C19orf44Q9H6X5 657 aa15.58■□□□□ 0.08
SNX1-201ENST00000261889 ABCA3Q99758 1704 aa15.58■□□□□ 0.08
SNX1-201ENST00000261889 PXDNQ92626 1479 aa15.58■□□□□ 0.08
SNX1-201ENST00000261889 CDC37L1Q7L3B6 337 aa15.58■□□□□ 0.08
SNX1-201ENST00000261889 AHDC1Q5TGY3 1603 aaPredicted RBP15.57■□□□□ 0.08
SNX1-201ENST00000261889 MED1Q15648 1581 aaPredicted RBP15.57■□□□□ 0.08
SNX1-201ENST00000261889 NLRP6P59044 892 aa15.57■□□□□ 0.08
SNX1-201ENST00000261889 ARID5BQ14865 1188 aa15.57■□□□□ 0.08
SNX1-201ENST00000261889 CCDC183Q5T5S1 534 aa15.57■□□□□ 0.08
SNX1-201ENST00000261889 IL17REQ8NFR9 667 aa15.57■□□□□ 0.08
SNX1-201ENST00000261889 CHPF2Q9P2E5 772 aa15.57■□□□□ 0.08
SNX1-201ENST00000261889 CWF19L2Q2TBE0 894 aaKnown RBP15.57■□□□□ 0.08
SNX1-201ENST00000261889 DIAPH3Q9NSV4 1193 aa15.57■□□□□ 0.08
SNX1-201ENST00000261889 NAP1L2Q9ULW6 460 aaPredicted RBP15.57■□□□□ 0.08
SNX1-201ENST00000261889 F13A1P00488 732 aa15.56■□□□□ 0.08
SNX1-201ENST00000261889 HS1BP3Q53T59 392 aa15.56■□□□□ 0.08
SNX1-201ENST00000261889 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
SNX1-201ENST00000261889 SLFNL1Q499Z3 407 aa15.56■□□□□ 0.08
SNX1-201ENST00000261889 SALL3Q9BXA9 1300 aa15.56■□□□□ 0.08
SNX1-201ENST00000261889 HSPA4P34932 840 aa15.56■□□□□ 0.08
SNX1-201ENST00000261889 ME3Q16798 604 aa15.55■□□□□ 0.08
SNX1-201ENST00000261889 MYRIPQ8NFW9 859 aa15.55■□□□□ 0.08
SNX1-201ENST00000261889 PIBF1Q8WXW3 757 aa15.55■□□□□ 0.08
SNX1-201ENST00000261889 FTOQ9C0B1 505 aaKnown RBP eCLIP15.55■□□□□ 0.08
SNX1-201ENST00000261889 KDM4AO75164 1064 aa15.55■□□□□ 0.08
SNX1-201ENST00000261889 ROBO1Q9Y6N7 1651 aa15.55■□□□□ 0.08
SNX1-201ENST00000261889 ST3GAL1Q11201 340 aa15.55■□□□□ 0.08
SNX1-201ENST00000261889 PI4K2BQ8TCG2 481 aa15.55■□□□□ 0.08
SNX1-201ENST00000261889 TLR7Q9NYK1 1049 aaKnown RBP15.55■□□□□ 0.08
SNX1-201ENST00000261889 COL22A1Q8NFW1 1626 aaPredicted RBP15.54■□□□□ 0.08
SNX1-201ENST00000261889 OVOS2A0A0J9YW53 1432 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 OVOS2Q6IE36 1432 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 PROSER2Q86WR7 435 aaPredicted RBP15.54■□□□□ 0.08
SNX1-201ENST00000261889 BOLA2Q9H3K6 86 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 OSBPL3Q9H4L5 887 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 PDRG1Q9NUG6 133 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 SGSM2O43147 1006 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 GNAI3P08754 354 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 CCDC186Q7Z3E2 898 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 TTC6Q86TZ1 520 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 KIF3AQ9Y496 699 aa15.54■□□□□ 0.08
SNX1-201ENST00000261889 CCDC30Q5VVM6 783 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 LMOD2Q6P5Q4 547 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 LSG1Q9H089 658 aaKnown RBP15.53■□□□□ 0.08
SNX1-201ENST00000261889 SLIT3O75094 1523 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
SNX1-201ENST00000261889 CRB1P82279 1406 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms