RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 TSPYL6Q8N831 410 aa24.11■■□□□ 1.45
CYSTM1-201ENST00000261811 SPINK5Q9NQ38 1064 aaPredicted RBP24.11■■□□□ 1.45
CYSTM1-201ENST00000261811 MAP3K15Q6ZN16 1313 aa24.1■■□□□ 1.45
CYSTM1-201ENST00000261811 KLHL34Q8N239 644 aa24.1■■□□□ 1.45
CYSTM1-201ENST00000261811 SETDB2Q96T68 719 aa24.1■■□□□ 1.45
CYSTM1-201ENST00000261811 ANKRD36CQ5JPF3 1778 aa24.09■■□□□ 1.45
CYSTM1-201ENST00000261811 AIMP1Q12904 312 aaKnown RBP24.09■■□□□ 1.45
CYSTM1-201ENST00000261811 COPS6Q7L5N1 327 aa24.09■■□□□ 1.45
CYSTM1-201ENST00000261811 BCL2L12Q9HB09 334 aa24.09■■□□□ 1.45
CYSTM1-201ENST00000261811 ANXA1P04083 346 aa24.08■■□□□ 1.44
CYSTM1-201ENST00000261811 TM4SF1P30408 202 aa24.08■■□□□ 1.44
CYSTM1-201ENST00000261811 PROSER3Q2NL68 480 aa24.08■■□□□ 1.44
CYSTM1-201ENST00000261811 XAGE3Q8WTP9 111 aa24.08■■□□□ 1.44
CYSTM1-201ENST00000261811 KIF13BQ9NQT8 1826 aa24.07■■□□□ 1.44
CYSTM1-201ENST00000261811 NFIXQ14938 502 aa24.07■■□□□ 1.44
CYSTM1-201ENST00000261811 BICDL1Q6ZP65 573 aa24.07■■□□□ 1.44
CYSTM1-201ENST00000261811 TTLL7Q6ZT98 887 aa24.07■■□□□ 1.44
CYSTM1-201ENST00000261811 CARMIL3Q8ND23 1372 aa24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 NPHP1O15259 732 aa24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 VAMP4O75379 141 aa24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 DDX58O95786 925 aaKnown RBP24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 TBC1D9BQ66K14 1250 aa24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 LRP10Q7Z4F1 713 aa24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 FHDC1Q9C0D6 1143 aaPredicted RBP24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 ZBTB3Q9H5J0 574 aa24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 CD2APQ9Y5K6 639 aa24.06■■□□□ 1.44
CYSTM1-201ENST00000261811 HSP90AB3PQ58FF7 597 aa24.05■■□□□ 1.44
CYSTM1-201ENST00000261811 CDCA7LQ96GN5 454 aa24.05■■□□□ 1.44
CYSTM1-201ENST00000261811 NRXN2Q9P2S2 1712 aa24.05■■□□□ 1.44
CYSTM1-201ENST00000261811 ARFGEF2Q9Y6D5 1785 aa24.04■■□□□ 1.44
CYSTM1-201ENST00000261811 ZBED9Q6R2W3 1325 aa24.04■■□□□ 1.44
CYSTM1-201ENST00000261811 POLRMTO00411 1230 aaKnown RBP24.04■■□□□ 1.44
CYSTM1-201ENST00000261811 GIGYF2Q6Y7W6 1299 aaKnown RBP24.04■■□□□ 1.44
CYSTM1-201ENST00000261811 ANKRD13DQ6ZTN6 518 aa24.04■■□□□ 1.44
CYSTM1-201ENST00000261811 ZNF428Q96B54 188 aa24.04■■□□□ 1.44
CYSTM1-201ENST00000261811 NIP7Q9Y221 180 aaKnown RBP eCLIP24.04■■□□□ 1.44
CYSTM1-201ENST00000261811 SERPINB2P05120 415 aa24.03■■□□□ 1.44
CYSTM1-201ENST00000261811 PLBD2Q8NHP8 589 aa24.03■■□□□ 1.44
CYSTM1-201ENST00000261811 SYT17Q9BSW7 474 aa24.03■■□□□ 1.44
CYSTM1-201ENST00000261811 DCAF8L1A6NGE4 600 aa24.02■■□□□ 1.44
CYSTM1-201ENST00000261811 SLC4A2P04920 1241 aa24.02■■□□□ 1.44
CYSTM1-201ENST00000261811 CT47B1P0C2W7 299 aaPredicted RBP24.02■■□□□ 1.44
CYSTM1-201ENST00000261811 DDR1Q08345 913 aa24.02■■□□□ 1.44
CYSTM1-201ENST00000261811 HLFQ16534 295 aa24.02■■□□□ 1.44
CYSTM1-201ENST00000261811 TRMT2AQ8IZ69 625 aaKnown RBP24.02■■□□□ 1.44
CYSTM1-201ENST00000261811 ATP10DQ9P241 1426 aa24.01■■□□□ 1.43
CYSTM1-201ENST00000261811 RIC3Q7Z5B4 369 aa24.01■■□□□ 1.43
CYSTM1-201ENST00000261811 NBPF5PQ86XG9 351 aaPredicted RBP24■■□□□ 1.43
CYSTM1-201ENST00000261811 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
CYSTM1-201ENST00000261811 GTF2E1P29083 439 aaPredicted RBP23.99■■□□□ 1.43
CYSTM1-201ENST00000261811 TPTE2Q6XPS3 522 aa23.99■■□□□ 1.43
CYSTM1-201ENST00000261811 NYXQ9GZU5 481 aa23.99■■□□□ 1.43
CYSTM1-201ENST00000261811 TCERG1O14776 1098 aaKnown RBP23.98■■□□□ 1.43
CYSTM1-201ENST00000261811 ST5P78524 1137 aa23.98■■□□□ 1.43
CYSTM1-201ENST00000261811 PARP10Q53GL7 1025 aa23.98■■□□□ 1.43
CYSTM1-201ENST00000261811 CNBD1Q8NA66 436 aa23.98■■□□□ 1.43
CYSTM1-201ENST00000261811 N4BP2Q86UW6 1770 aaPredicted RBP23.97■■□□□ 1.43
CYSTM1-201ENST00000261811 TGFB2P61812 414 aa23.97■■□□□ 1.43
CYSTM1-201ENST00000261811 PPP1R42Q7Z4L9 355 aa23.97■■□□□ 1.43
CYSTM1-201ENST00000261811 C10orf71Q711Q0 1435 aa23.97■■□□□ 1.43
CYSTM1-201ENST00000261811 TCIRG1Q13488 830 aa23.96■■□□□ 1.43
CYSTM1-201ENST00000261811 GPTP24298 496 aa23.95■■□□□ 1.42
CYSTM1-201ENST00000261811 ZNF34Q8IZ26 560 aa23.95■■□□□ 1.42
CYSTM1-201ENST00000261811 PDZRN3Q9UPQ7 1066 aa23.95■■□□□ 1.42
CYSTM1-201ENST00000261811 FLIIQ13045 1269 aa23.94■■□□□ 1.42
CYSTM1-201ENST00000261811 KSR2Q6VAB6 950 aa23.94■■□□□ 1.42
CYSTM1-201ENST00000261811 PDE6BP35913 854 aa23.93■■□□□ 1.42
CYSTM1-201ENST00000261811 NEXNQ0ZGT2 675 aa23.93■■□□□ 1.42
CYSTM1-201ENST00000261811 FKBP5Q13451 457 aaPredicted RBP23.93■■□□□ 1.42
CYSTM1-201ENST00000261811 ALDH1L2Q3SY69 923 aa23.93■■□□□ 1.42
CYSTM1-201ENST00000261811 IBTKQ9P2D0 1353 aaPredicted RBP23.93■■□□□ 1.42
CYSTM1-201ENST00000261811 ANKRD31Q8N7Z5 1873 aa23.93■■□□□ 1.42
CYSTM1-201ENST00000261811 FAM177BA6PVY3 158 aa23.92■■□□□ 1.42
CYSTM1-201ENST00000261811 PRR5LQ6MZQ0 368 aa23.92■■□□□ 1.42
CYSTM1-201ENST00000261811 RNF123Q5XPI4 1314 aa23.92■■□□□ 1.42
CYSTM1-201ENST00000261811 BRIP1Q9BX63 1249 aa23.91■■□□□ 1.42
CYSTM1-201ENST00000261811 MAP3K2Q9Y2U5 619 aa23.91■■□□□ 1.42
CYSTM1-201ENST00000261811 DLEC1Q9Y238 1755 aa23.91■■□□□ 1.42
CYSTM1-201ENST00000261811 PI4KAP2A4QPH2 592 aa23.9■■□□□ 1.42
CYSTM1-201ENST00000261811 PI4KAP1Q8N8J0 262 aa23.9■■□□□ 1.42
CYSTM1-201ENST00000261811 NLGN2Q8NFZ4 835 aa23.9■■□□□ 1.42
CYSTM1-201ENST00000261811 UTP14AQ9BVJ6 771 aaKnown RBP23.9■■□□□ 1.42
CYSTM1-201ENST00000261811 KIAA1551Q9HCM1 1747 aa23.9■■□□□ 1.42
CYSTM1-201ENST00000261811 BRCA1P38398 1863 aaKnown RBP23.9■■□□□ 1.42
CYSTM1-201ENST00000261811 G2E3Q7L622 706 aa23.89■■□□□ 1.42
CYSTM1-201ENST00000261811 METTL22Q9BUU2 404 aaPredicted RBP23.89■■□□□ 1.42
CYSTM1-201ENST00000261811 UBN2Q6ZU65 1347 aa23.89■■□□□ 1.41
CYSTM1-201ENST00000261811 H0YIN7 160 aa23.88■■□□□ 1.41
CYSTM1-201ENST00000261811 TRIM28Q13263 835 aaKnown RBP23.88■■□□□ 1.41
CYSTM1-201ENST00000261811 SUSD4Q5VX71 490 aa23.88■■□□□ 1.41
CYSTM1-201ENST00000261811 NLRP10Q86W26 655 aa23.88■■□□□ 1.41
CYSTM1-201ENST00000261811 MYD88Q99836 296 aa23.88■■□□□ 1.41
CYSTM1-201ENST00000261811 ISCA1Q9BUE6 129 aa23.87■■□□□ 1.41
CYSTM1-201ENST00000261811 SMC4Q9NTJ3 1288 aa23.87■■□□□ 1.41
CYSTM1-201ENST00000261811 ATP5J2-PTCD1G3V325 749 aa23.86■■□□□ 1.41
CYSTM1-201ENST00000261811 HSP90B1P14625 803 aaKnown RBP23.86■■□□□ 1.41
CYSTM1-201ENST00000261811 CCDC191Q8NCU4 936 aa23.86■■□□□ 1.41
CYSTM1-201ENST00000261811 SSH1Q8WYL5 1049 aa23.86■■□□□ 1.41
CYSTM1-201ENST00000261811 TRMT112Q9UI30 125 aaKnown RBP23.86■■□□□ 1.41
CYSTM1-201ENST00000261811 PXDNLA1KZ92 1463 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms