RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 GNAI2P04899 355 aa21.93■■□□□ 1.1
SSB-201ENST00000260956 BECN1Q14457 450 aa21.93■■□□□ 1.1
SSB-201ENST00000260956 TTC22Q5TAA0 569 aa21.93■■□□□ 1.1
SSB-201ENST00000260956 NECTIN2Q92692 538 aa21.93■■□□□ 1.1
SSB-201ENST00000260956 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
SSB-201ENST00000260956 LOC102724428A0A0B4J2F2 783 aa21.92■■□□□ 1.1
SSB-201ENST00000260956 PSDA5PKW4 1024 aaPredicted RBP21.92■■□□□ 1.1
SSB-201ENST00000260956 SIK1P57059 783 aa21.92■■□□□ 1.1
SSB-201ENST00000260956 PHAXQ9H814 394 aaKnown RBP21.92■■□□□ 1.1
SSB-201ENST00000260956 PTCD1O75127 700 aaKnown RBP21.92■■□□□ 1.1
SSB-201ENST00000260956 ITPK1Q13572 414 aa21.92■■□□□ 1.1
SSB-201ENST00000260956 SLC27A3Q5K4L6 730 aa21.92■■□□□ 1.1
SSB-201ENST00000260956 C16orf71Q8IYS4 520 aaPredicted RBP21.92■■□□□ 1.1
SSB-201ENST00000260956 SMARCC1Q92922 1105 aaPredicted RBP21.92■■□□□ 1.1
SSB-201ENST00000260956 USP44Q9H0E7 712 aa21.92■■□□□ 1.1
SSB-201ENST00000260956 DAXXQ9UER7 740 aaPredicted RBP21.92■■□□□ 1.1
SSB-201ENST00000260956 ADCY9O60503 1353 aa21.91■■□□□ 1.1
SSB-201ENST00000260956 GNAI3P08754 354 aa21.91■■□□□ 1.1
SSB-201ENST00000260956 TEFQ10587 303 aa21.91■■□□□ 1.1
SSB-201ENST00000260956 R3HDM1Q15032 1099 aaKnown RBP21.91■■□□□ 1.1
SSB-201ENST00000260956 ZNF827Q17R98 1081 aa21.91■■□□□ 1.1
SSB-201ENST00000260956 HMMRO75330 724 aa21.9■■□□□ 1.1
SSB-201ENST00000260956 KIF2CQ99661 725 aa21.9■■□□□ 1.1
SSB-201ENST00000260956 PAPPAQ13219 1627 aa21.9■■□□□ 1.1
SSB-201ENST00000260956 BTBD11A6QL63 1104 aa21.89■■□□□ 1.1
SSB-201ENST00000260956 NFKBIBQ15653 356 aa21.89■■□□□ 1.1
SSB-201ENST00000260956 PDGFDQ9GZP0 370 aaPredicted RBP21.89■■□□□ 1.1
SSB-201ENST00000260956 CHPF2Q9P2E5 772 aa21.89■■□□□ 1.1
SSB-201ENST00000260956 CDC45O75419 566 aa21.89■■□□□ 1.09
SSB-201ENST00000260956 RBM42Q9BTD8 480 aaKnown RBP21.89■■□□□ 1.09
SSB-201ENST00000260956 OSBPL3Q9H4L5 887 aa21.89■■□□□ 1.09
SSB-201ENST00000260956 IBTKQ9P2D0 1353 aaPredicted RBP21.88■■□□□ 1.09
SSB-201ENST00000260956 SMARCA5O60264 1052 aaPredicted RBP21.88■■□□□ 1.09
SSB-201ENST00000260956 ATP8B2P98198 1209 aa21.88■■□□□ 1.09
SSB-201ENST00000260956 PNMA6EA0A0J9YXQ4 647 aa21.87■■□□□ 1.09
SSB-201ENST00000260956 GIGYF1O75420 1035 aaPredicted RBP21.87■■□□□ 1.09
SSB-201ENST00000260956 AMIGO3Q86WK7 504 aa21.87■■□□□ 1.09
SSB-201ENST00000260956 LINC00116Q8NCU8 138 aa21.87■■□□□ 1.09
SSB-201ENST00000260956 AKT1S1Q96B36 256 aa21.87■■□□□ 1.09
SSB-201ENST00000260956 ATP6V1AP38606 617 aa21.86■■□□□ 1.09
SSB-201ENST00000260956 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
SSB-201ENST00000260956 ZNF790Q6PG37 636 aa21.86■■□□□ 1.09
SSB-201ENST00000260956 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
SSB-201ENST00000260956 KCPQ6ZWJ8 1503 aa21.86■■□□□ 1.09
SSB-201ENST00000260956 SLC15A2Q16348 729 aa21.86■■□□□ 1.09
SSB-201ENST00000260956 BEND3Q5T5X7 828 aa21.86■■□□□ 1.09
SSB-201ENST00000260956 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
SSB-201ENST00000260956 ZNF496Q96IT1 587 aaPredicted RBP21.85■■□□□ 1.09
SSB-201ENST00000260956 LRRFIP2Q9Y608 721 aaKnown RBP21.85■■□□□ 1.09
SSB-201ENST00000260956 NBPF14Q5TI25 921 aa21.84■■□□□ 1.09
SSB-201ENST00000260956 SNX21Q969T3 373 aa21.84■■□□□ 1.09
SSB-201ENST00000260956 POLA2Q14181 598 aa21.83■■□□□ 1.09
SSB-201ENST00000260956 SSH3Q8TE77 659 aa21.83■■□□□ 1.09
SSB-201ENST00000260956 EIF2S2P20042 333 aaKnown RBP21.83■■□□□ 1.08
SSB-201ENST00000260956 LAMB4A4D0S4 1761 aa21.82■■□□□ 1.08
SSB-201ENST00000260956 DNAAF4Q8WXU2 420 aa21.82■■□□□ 1.08
SSB-201ENST00000260956 SDSP20132 328 aa21.81■■□□□ 1.08
SSB-201ENST00000260956 DEKP35659 375 aaKnown RBP21.81■■□□□ 1.08
SSB-201ENST00000260956 PROSER3Q2NL68 480 aa21.81■■□□□ 1.08
SSB-201ENST00000260956 SRCIN1Q9C0H9 1055 aa21.81■■□□□ 1.08
SSB-201ENST00000260956 STK32BQ9NY57 414 aa21.81■■□□□ 1.08
SSB-201ENST00000260956 DBF4Q9UBU7 674 aaPredicted RBP21.81■■□□□ 1.08
SSB-201ENST00000260956 TAF1LQ8IZX4 1826 aa21.81■■□□□ 1.08
SSB-201ENST00000260956 PDE1AP54750 535 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 DNAJC10Q8IXB1 793 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 EXOC6BQ9Y2D4 811 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 PRAMEF22A3QJZ6 481 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 PI4KAP2A4QPH2 592 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 ANXA1P04083 346 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 UBTFL1P0CB47 393 aaPredicted RBP21.8■■□□□ 1.08
SSB-201ENST00000260956 DDIT3P35638 169 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 PDIA6Q15084 440 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 PI4KAP1Q8N8J0 262 aa21.8■■□□□ 1.08
SSB-201ENST00000260956 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
SSB-201ENST00000260956 TTC5Q8N0Z6 440 aa21.78■■□□□ 1.08
SSB-201ENST00000260956 STAP2Q9UGK3 403 aa21.78■■□□□ 1.08
SSB-201ENST00000260956 PNPLA7Q6ZV29 1317 aa21.78■■□□□ 1.08
SSB-201ENST00000260956 C4BP0C0L5 1744 aa21.78■■□□□ 1.08
SSB-201ENST00000260956 TJP1Q07157 1748 aa21.78■■□□□ 1.08
SSB-201ENST00000260956 TFCP2L1Q9NZI6 479 aa21.77■■□□□ 1.08
SSB-201ENST00000260956 ZNF831Q5JPB2 1677 aa21.77■■□□□ 1.08
SSB-201ENST00000260956 MTX1Q13505 466 aa21.77■■□□□ 1.08
SSB-201ENST00000260956 LRRCC1Q9C099 1032 aa21.77■■□□□ 1.08
SSB-201ENST00000260956 APBB1O00213 710 aa21.76■■□□□ 1.07
SSB-201ENST00000260956 FRAT2O75474 233 aaPredicted RBP21.76■■□□□ 1.07
SSB-201ENST00000260956 NBPF7P0C2Y1 421 aaPredicted RBP21.76■■□□□ 1.07
SSB-201ENST00000260956 CYP19A1P11511 503 aaPredicted RBP21.76■■□□□ 1.07
SSB-201ENST00000260956 ALDH1L1O75891 902 aa21.75■■□□□ 1.07
SSB-201ENST00000260956 INTS5Q6P9B9 1019 aaKnown RBP21.75■■□□□ 1.07
SSB-201ENST00000260956 SLKQ9H2G2 1235 aaPredicted RBP21.75■■□□□ 1.07
SSB-201ENST00000260956 AOX1Q06278 1338 aa21.75■■□□□ 1.07
SSB-201ENST00000260956 MYH14Q7Z406 1995 aaKnown RBP21.75■■□□□ 1.07
SSB-201ENST00000260956 CRKLP46109 303 aaKnown RBP21.75■■□□□ 1.07
SSB-201ENST00000260956 LRP10Q7Z4F1 713 aa21.75■■□□□ 1.07
SSB-201ENST00000260956 VSIG10Q8N0Z9 540 aa21.75■■□□□ 1.07
SSB-201ENST00000260956 FMNL2Q96PY5 1086 aa21.75■■□□□ 1.07
SSB-201ENST00000260956 DDX21Q9NR30 783 aaKnown RBP eCLIP21.75■■□□□ 1.07
SSB-201ENST00000260956 UTYO14607 1347 aa21.74■■□□□ 1.07
SSB-201ENST00000260956 COL5A3P25940 1745 aaPredicted RBP21.74■■□□□ 1.07
SSB-201ENST00000260956 KSR2Q6VAB6 950 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms