RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 KRT27Q7Z3Y8 459 aa20.98■□□□□ 0.95
HLA-F-216ENST00000259951 USP44Q9H0E7 712 aa20.98■□□□□ 0.95
HLA-F-216ENST00000259951 FAM196AQ6ZSG2 479 aa20.97■□□□□ 0.95
HLA-F-216ENST00000259951 NPM2Q86SE8 214 aaKnown RBP20.97■□□□□ 0.95
HLA-F-216ENST00000259951 ANKRD44Q8N8A2 993 aa20.97■□□□□ 0.95
HLA-F-216ENST00000259951 AFDNP55196 1824 aaKnown RBP20.97■□□□□ 0.95
HLA-F-216ENST00000259951 RREB1Q92766 1687 aa20.96■□□□□ 0.95
HLA-F-216ENST00000259951 HMMRO75330 724 aa20.96■□□□□ 0.95
HLA-F-216ENST00000259951 FAM182BQ5T319 152 aa20.96■□□□□ 0.95
HLA-F-216ENST00000259951 KIF6Q6ZMV9 814 aa20.96■□□□□ 0.95
HLA-F-216ENST00000259951 UPF1Q92900 1129 aaKnown RBP eCLIP20.96■□□□□ 0.95
HLA-F-216ENST00000259951 C9orf78Q9NZ63 289 aaPredicted RBP20.96■□□□□ 0.95
HLA-F-216ENST00000259951 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
HLA-F-216ENST00000259951 IL6STP40189 918 aaPredicted RBP20.95■□□□□ 0.94
HLA-F-216ENST00000259951 CEP85Q6P2H3 762 aa20.95■□□□□ 0.94
HLA-F-216ENST00000259951 GCC1Q96CN9 775 aa20.95■□□□□ 0.94
HLA-F-216ENST00000259951 MYD88Q99836 296 aa20.95■□□□□ 0.94
HLA-F-216ENST00000259951 SMC5Q8IY18 1101 aa20.94■□□□□ 0.94
HLA-F-216ENST00000259951 BCL11BQ9C0K0 894 aaPredicted RBP20.94■□□□□ 0.94
HLA-F-216ENST00000259951 CCDC87Q9NVE4 849 aa20.94■□□□□ 0.94
HLA-F-216ENST00000259951 TTLL7Q6ZT98 887 aa20.93■□□□□ 0.94
HLA-F-216ENST00000259951 ZNF330Q9Y3S2 320 aaPredicted RBP20.93■□□□□ 0.94
HLA-F-216ENST00000259951 LY75O60449 1722 aa20.93■□□□□ 0.94
HLA-F-216ENST00000259951 NEURL1BA8MQ27 555 aa20.93■□□□□ 0.94
HLA-F-216ENST00000259951 CWF19L2Q2TBE0 894 aaKnown RBP20.93■□□□□ 0.94
HLA-F-216ENST00000259951 SIRT2Q8IXJ6 389 aa20.93■□□□□ 0.94
HLA-F-216ENST00000259951 ZBTB1Q9Y2K1 713 aa20.93■□□□□ 0.94
HLA-F-216ENST00000259951 GRM8O00222 908 aa20.92■□□□□ 0.94
HLA-F-216ENST00000259951 IGKV5-2P06315 115 aa20.92■□□□□ 0.94
HLA-F-216ENST00000259951 CRKLP46109 303 aaKnown RBP20.92■□□□□ 0.94
HLA-F-216ENST00000259951 ITPK1Q13572 414 aa20.92■□□□□ 0.94
HLA-F-216ENST00000259951 LRRFIP2Q9Y608 721 aaKnown RBP20.92■□□□□ 0.94
HLA-F-216ENST00000259951 UTYO14607 1347 aa20.91■□□□□ 0.94
HLA-F-216ENST00000259951 NBPF7P0C2Y1 421 aaPredicted RBP20.9■□□□□ 0.94
HLA-F-216ENST00000259951 GCKRQ14397 625 aa20.9■□□□□ 0.94
HLA-F-216ENST00000259951 ZBTB3Q9H5J0 574 aa20.9■□□□□ 0.94
HLA-F-216ENST00000259951 MAP3K15Q6ZN16 1313 aa20.9■□□□□ 0.94
HLA-F-216ENST00000259951 ATP8B2P98198 1209 aa20.89■□□□□ 0.94
HLA-F-216ENST00000259951 INTS5Q6P9B9 1019 aaKnown RBP20.89■□□□□ 0.94
HLA-F-216ENST00000259951 PTF1AQ7RTS3 328 aa20.89■□□□□ 0.94
HLA-F-216ENST00000259951 MYH14Q7Z406 1995 aaKnown RBP20.89■□□□□ 0.94
HLA-F-216ENST00000259951 HSP90AB3PQ58FF7 597 aa20.89■□□□□ 0.93
HLA-F-216ENST00000259951 DCTPP1Q9H773 170 aa20.89■□□□□ 0.93
HLA-F-216ENST00000259951 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.93
HLA-F-216ENST00000259951 ERVV-1B6SEH8 477 aa20.88■□□□□ 0.93
HLA-F-216ENST00000259951 EIF5P55010 431 aaKnown RBP20.88■□□□□ 0.93
HLA-F-216ENST00000259951 ARXQ96QS3 562 aa20.88■□□□□ 0.93
HLA-F-216ENST00000259951 CNTNAP4Q9C0A0 1308 aa20.88■□□□□ 0.93
HLA-F-216ENST00000259951 EP400Q96L91 3159 aa20.87■□□□□ 0.93
HLA-F-216ENST00000259951 HMGB2P26583 209 aaKnown RBP20.87■□□□□ 0.93
HLA-F-216ENST00000259951 CCDC191Q8NCU4 936 aa20.87■□□□□ 0.93
HLA-F-216ENST00000259951 CWC25Q9NXE8 425 aaPredicted RBP20.87■□□□□ 0.93
HLA-F-216ENST00000259951 CCNL1Q9UK58 526 aaPredicted RBP20.87■□□□□ 0.93
HLA-F-216ENST00000259951 ANKRD36CQ5JPF3 1778 aa20.87■□□□□ 0.93
HLA-F-216ENST00000259951 TCIRG1Q13488 830 aa20.86■□□□□ 0.93
HLA-F-216ENST00000259951 RC3H1Q5TC82 1133 aaKnown RBP20.86■□□□□ 0.93
HLA-F-216ENST00000259951 GIGYF2Q6Y7W6 1299 aaKnown RBP20.86■□□□□ 0.93
HLA-F-216ENST00000259951 DZIP3Q86Y13 1208 aaKnown RBP20.86■□□□□ 0.93
HLA-F-216ENST00000259951 NUP98P52948 1817 aa20.86■□□□□ 0.93
HLA-F-216ENST00000259951 TAF1LQ8IZX4 1826 aa20.86■□□□□ 0.93
HLA-F-216ENST00000259951 A0A087WZG4 1122 aa20.86■□□□□ 0.93
HLA-F-216ENST00000259951 ATP5J2-PTCD1G3V325 749 aa20.86■□□□□ 0.93
HLA-F-216ENST00000259951 NUCB1Q02818 461 aa20.86■□□□□ 0.93
HLA-F-216ENST00000259951 TRIM28Q13263 835 aaKnown RBP20.86■□□□□ 0.93
HLA-F-216ENST00000259951 ZBTB47Q9UFB7 747 aaPredicted RBP20.86■□□□□ 0.93
HLA-F-216ENST00000259951 LINC00116Q8NCU8 138 aa20.85■□□□□ 0.93
HLA-F-216ENST00000259951 COL15A1P39059 1388 aa20.84■□□□□ 0.93
HLA-F-216ENST00000259951 MTX1Q13505 466 aa20.84■□□□□ 0.93
HLA-F-216ENST00000259951 ISCA1Q9BUE6 129 aa20.84■□□□□ 0.93
HLA-F-216ENST00000259951 RGS3P49796 1198 aa20.83■□□□□ 0.93
HLA-F-216ENST00000259951 SSH3Q8TE77 659 aa20.83■□□□□ 0.93
HLA-F-216ENST00000259951 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
HLA-F-216ENST00000259951 PPP1R42Q7Z4L9 355 aa20.82■□□□□ 0.92
HLA-F-216ENST00000259951 CHD1LQ86WJ1 897 aa20.82■□□□□ 0.92
HLA-F-216ENST00000259951 PNMA6EA0A0J9YXQ4 647 aa20.82■□□□□ 0.92
HLA-F-216ENST00000259951 TRIM37O94972 964 aa20.82■□□□□ 0.92
HLA-F-216ENST00000259951 SUCLG2Q96I99 432 aa20.82■□□□□ 0.92
HLA-F-216ENST00000259951 TBC1D2BQ9UPU7 963 aa20.82■□□□□ 0.92
HLA-F-216ENST00000259951 H7C1W4 665 aa20.81■□□□□ 0.92
HLA-F-216ENST00000259951 SRGAP3O43295 1099 aa20.81■□□□□ 0.92
HLA-F-216ENST00000259951 POLA2Q14181 598 aa20.81■□□□□ 0.92
HLA-F-216ENST00000259951 SLC27A3Q5K4L6 730 aa20.81■□□□□ 0.92
HLA-F-216ENST00000259951 UBE3BQ7Z3V4 1068 aa20.81■□□□□ 0.92
HLA-F-216ENST00000259951 BCORQ6W2J9 1755 aa20.8■□□□□ 0.92
HLA-F-216ENST00000259951 RGL2O15211 777 aa20.79■□□□□ 0.92
HLA-F-216ENST00000259951 RPS6KA4O75676 772 aa20.79■□□□□ 0.92
HLA-F-216ENST00000259951 HLFQ16534 295 aa20.79■□□□□ 0.92
HLA-F-216ENST00000259951 SKAP1Q86WV1 359 aa20.79■□□□□ 0.92
HLA-F-216ENST00000259951 ZNF652Q9Y2D9 606 aa20.79■□□□□ 0.92
HLA-F-216ENST00000259951 C4BP0C0L5 1744 aa20.79■□□□□ 0.92
HLA-F-216ENST00000259951 HSP90AB4PQ58FF6 505 aa20.78■□□□□ 0.92
HLA-F-216ENST00000259951 BICC1Q9H694 974 aaKnown RBP20.78■□□□□ 0.92
HLA-F-216ENST00000259951 CASP7P55210 303 aa20.78■□□□□ 0.92
HLA-F-216ENST00000259951 KCNQ4P56696 695 aa20.78■□□□□ 0.92
HLA-F-216ENST00000259951 LNPKQ9C0E8 428 aa20.78■□□□□ 0.92
HLA-F-216ENST00000259951 RAB11FIP3O75154 756 aa20.77■□□□□ 0.92
HLA-F-216ENST00000259951 KAZALD1Q96I82 304 aa20.77■□□□□ 0.92
HLA-F-216ENST00000259951 RTCBQ9Y3I0 505 aaKnown RBP20.77■□□□□ 0.92
HLA-F-216ENST00000259951 CAMTA2O94983 1202 aa20.76■□□□□ 0.91
HLA-F-216ENST00000259951 PCCAP05165 728 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms