RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SIRT2Q8IXJ6 389 aa11.88□□□□□ -0.51
NIP7-202ENST00000254941 FBXO41Q8TF61 875 aa11.88□□□□□ -0.51
NIP7-202ENST00000254941 SMARCC1Q92922 1105 aaPredicted RBP11.88□□□□□ -0.51
NIP7-202ENST00000254941 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 ALDH1L1O75891 902 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 CYP19A1P11511 503 aaPredicted RBP11.87□□□□□ -0.51
NIP7-202ENST00000254941 RPAP2Q8IXW5 612 aaPredicted RBP11.87□□□□□ -0.51
NIP7-202ENST00000254941 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 RREB1Q92766 1687 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 GNAI2P04899 355 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 SIK1P57059 783 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 SMC5Q8IY18 1101 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 PLBD2Q8NHP8 589 aa11.87□□□□□ -0.51
NIP7-202ENST00000254941 METTL22Q9BUU2 404 aaPredicted RBP11.87□□□□□ -0.51
NIP7-202ENST00000254941 CEP85Q6P2H3 762 aa11.86□□□□□ -0.51
NIP7-202ENST00000254941 LY75O60449 1722 aa11.86□□□□□ -0.51
NIP7-202ENST00000254941 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
NIP7-202ENST00000254941 RBM6P78332 1123 aaKnown RBP11.85□□□□□ -0.51
NIP7-202ENST00000254941 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
NIP7-202ENST00000254941 FAM182BQ5T319 152 aa11.85□□□□□ -0.51
NIP7-202ENST00000254941 IGKV5-2P06315 115 aa11.85□□□□□ -0.51
NIP7-202ENST00000254941 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
NIP7-202ENST00000254941 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
NIP7-202ENST00000254941 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
NIP7-202ENST00000254941 NUP98P52948 1817 aa11.84□□□□□ -0.51
NIP7-202ENST00000254941 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
NIP7-202ENST00000254941 PTF1AQ7RTS3 328 aa11.84□□□□□ -0.51
NIP7-202ENST00000254941 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
NIP7-202ENST00000254941 TAF1LQ8IZX4 1826 aa11.84□□□□□ -0.51
NIP7-202ENST00000254941 UTYO14607 1347 aa11.84□□□□□ -0.51
NIP7-202ENST00000254941 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
NIP7-202ENST00000254941 NEURL1BA8MQ27 555 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 GRM8O00222 908 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 ITPK1Q13572 414 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 SKAP1Q86WV1 359 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 MYD88Q99836 296 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 C9orf78Q9NZ63 289 aaPredicted RBP11.83□□□□□ -0.52
NIP7-202ENST00000254941 ZBTB1Q9Y2K1 713 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 LRRFIP2Q9Y608 721 aaKnown RBP11.83□□□□□ -0.52
NIP7-202ENST00000254941 HMMRO75330 724 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 IL6STP40189 918 aaPredicted RBP11.83□□□□□ -0.52
NIP7-202ENST00000254941 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 DCTPP1Q9H773 170 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 PDZRN3Q9UPQ7 1066 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 HDAC5Q9UQL6 1122 aa11.83□□□□□ -0.52
NIP7-202ENST00000254941 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
NIP7-202ENST00000254941 GCKRQ14397 625 aa11.82□□□□□ -0.52
NIP7-202ENST00000254941 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
NIP7-202ENST00000254941 FAM196AQ6ZSG2 479 aa11.82□□□□□ -0.52
NIP7-202ENST00000254941 ATP8B2P98198 1209 aa11.81□□□□□ -0.52
NIP7-202ENST00000254941 NUCB1Q02818 461 aa11.81□□□□□ -0.52
NIP7-202ENST00000254941 BCL11BQ9C0K0 894 aaPredicted RBP11.81□□□□□ -0.52
NIP7-202ENST00000254941 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
NIP7-202ENST00000254941 EIF5P55010 431 aaKnown RBP11.8□□□□□ -0.52
NIP7-202ENST00000254941 KIF6Q6ZMV9 814 aa11.8□□□□□ -0.52
NIP7-202ENST00000254941 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
NIP7-202ENST00000254941 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
NIP7-202ENST00000254941 ZNF330Q9Y3S2 320 aaPredicted RBP11.8□□□□□ -0.52
NIP7-202ENST00000254941 MAP3K15Q6ZN16 1313 aa11.8□□□□□ -0.52
NIP7-202ENST00000254941 PNMA6EA0A0J9YXQ4 647 aa11.8□□□□□ -0.52
NIP7-202ENST00000254941 ATP5J2-PTCD1G3V325 749 aa11.8□□□□□ -0.52
NIP7-202ENST00000254941 RXRBP28702 533 aa11.79□□□□□ -0.52
NIP7-202ENST00000254941 RGS3P49796 1198 aa11.79□□□□□ -0.52
NIP7-202ENST00000254941 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
NIP7-202ENST00000254941 MTX1Q13505 466 aa11.79□□□□□ -0.52
NIP7-202ENST00000254941 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
NIP7-202ENST00000254941 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
NIP7-202ENST00000254941 COL15A1P39059 1388 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 ERVV-1B6SEH8 477 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 TRIM28Q13263 835 aaKnown RBP11.78□□□□□ -0.52
NIP7-202ENST00000254941 GIGYF2Q6Y7W6 1299 aaKnown RBP11.78□□□□□ -0.52
NIP7-202ENST00000254941 NPM2Q86SE8 214 aaKnown RBP11.78□□□□□ -0.52
NIP7-202ENST00000254941 CHD1LQ86WJ1 897 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 KAZALD1Q96I82 304 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 ISCA1Q9BUE6 129 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 RGS17Q9UGC6 210 aaPredicted RBP11.78□□□□□ -0.52
NIP7-202ENST00000254941 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 POLA2Q14181 598 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 ANKRD45Q5TZF3 282 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
NIP7-202ENST00000254941 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
NIP7-202ENST00000254941 BCORQ6W2J9 1755 aa11.78□□□□□ -0.52
NIP7-202ENST00000254941 A0A087WZG4 1122 aa11.77□□□□□ -0.53
NIP7-202ENST00000254941 CASP7P55210 303 aa11.77□□□□□ -0.53
NIP7-202ENST00000254941 HSP90AB3PQ58FF7 597 aa11.77□□□□□ -0.53
NIP7-202ENST00000254941 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.53
NIP7-202ENST00000254941 SUCLG2Q96I99 432 aa11.77□□□□□ -0.53
NIP7-202ENST00000254941 ARXQ96QS3 562 aa11.77□□□□□ -0.53
NIP7-202ENST00000254941 MYH3P11055 1940 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 H7C1W4 665 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 SRGAP3O43295 1099 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 ABCB7O75027 752 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 PDE4AP27815 886 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 KCNQ4P56696 695 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 HLFQ16534 295 aa11.76□□□□□ -0.53
NIP7-202ENST00000254941 UBE3BQ7Z3V4 1068 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms