RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
NIP7-201ENST00000254940 GPTP24298 496 aa15.33■□□□□ 0.04
NIP7-201ENST00000254940 MSL1Q68DK7 614 aa15.33■□□□□ 0.04
NIP7-201ENST00000254940 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
NIP7-201ENST00000254940 TMEM57Q8N5G2 664 aa15.33■□□□□ 0.04
NIP7-201ENST00000254940 MAP3K2Q9Y2U5 619 aa15.33■□□□□ 0.04
NIP7-201ENST00000254940 RIC3Q7Z5B4 369 aa15.32■□□□□ 0.04
NIP7-201ENST00000254940 ARHGEF1Q92888 912 aaKnown RBP15.32■□□□□ 0.04
NIP7-201ENST00000254940 HYPKQ9NX55 129 aa15.32■□□□□ 0.04
NIP7-201ENST00000254940 RTCBQ9Y3I0 505 aaKnown RBP15.32■□□□□ 0.04
NIP7-201ENST00000254940 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
NIP7-201ENST00000254940 TUBGCP6Q96RT7 1819 aa15.32■□□□□ 0.04
NIP7-201ENST00000254940 SOS1Q07889 1333 aaPredicted RBP15.31■□□□□ 0.04
NIP7-201ENST00000254940 COL15A1P39059 1388 aa15.31■□□□□ 0.04
NIP7-201ENST00000254940 CT47B1P0C2W7 299 aaPredicted RBP15.31■□□□□ 0.04
NIP7-201ENST00000254940 EIF5P55010 431 aaKnown RBP15.31■□□□□ 0.04
NIP7-201ENST00000254940 PDE3AQ14432 1141 aa15.31■□□□□ 0.04
NIP7-201ENST00000254940 USPL1Q5W0Q7 1092 aa15.31■□□□□ 0.04
NIP7-201ENST00000254940 ZKSCAN2Q63HK3 967 aa15.31■□□□□ 0.04
NIP7-201ENST00000254940 ADCY9O60503 1353 aa15.31■□□□□ 0.04
NIP7-201ENST00000254940 NUP188Q5SRE5 1749 aa15.31■□□□□ 0.04
NIP7-201ENST00000254940 CWF19L2Q2TBE0 894 aaKnown RBP15.31■□□□□ 0.04
NIP7-201ENST00000254940 MYD88Q99836 296 aa15.31■□□□□ 0.04
NIP7-201ENST00000254940 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
NIP7-201ENST00000254940 CNTNAP4Q9C0A0 1308 aa15.3■□□□□ 0.04
NIP7-201ENST00000254940 CCDC24Q8N4L8 307 aa15.3■□□□□ 0.04
NIP7-201ENST00000254940 AKT1S1Q96B36 256 aa15.3■□□□□ 0.04
NIP7-201ENST00000254940 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
NIP7-201ENST00000254940 RPS6KA4O75676 772 aa15.29■□□□□ 0.04
NIP7-201ENST00000254940 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
NIP7-201ENST00000254940 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
NIP7-201ENST00000254940 COL23A1Q86Y22 540 aaPredicted RBP15.29■□□□□ 0.04
NIP7-201ENST00000254940 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
NIP7-201ENST00000254940 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
NIP7-201ENST00000254940 DZIP1LQ8IYY4 767 aaKnown RBP15.29■□□□□ 0.04
NIP7-201ENST00000254940 IL6STP40189 918 aaPredicted RBP15.29■□□□□ 0.04
NIP7-201ENST00000254940 R3HDM1Q15032 1099 aaKnown RBP15.29■□□□□ 0.04
NIP7-201ENST00000254940 TRAPPC3LQ5T215 181 aa15.29■□□□□ 0.04
NIP7-201ENST00000254940 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
NIP7-201ENST00000254940 STK32BQ9NY57 414 aa15.29■□□□□ 0.04
NIP7-201ENST00000254940 RFC4P35249 363 aa15.28■□□□□ 0.04
NIP7-201ENST00000254940 RGS3P49796 1198 aa15.28■□□□□ 0.04
NIP7-201ENST00000254940 KIF16BQ96L93 1317 aa15.28■□□□□ 0.04
NIP7-201ENST00000254940 SLC15A2Q16348 729 aa15.28■□□□□ 0.04
NIP7-201ENST00000254940 PNPLA7Q6ZV29 1317 aa15.27■□□□□ 0.04
NIP7-201ENST00000254940 CACNA1FO60840 1977 aa15.27■□□□□ 0.04
NIP7-201ENST00000254940 RREB1Q92766 1687 aa15.27■□□□□ 0.04
NIP7-201ENST00000254940 CCDC125Q86Z20 511 aa15.27■□□□□ 0.03
NIP7-201ENST00000254940 ARFGEF2Q9Y6D5 1785 aa15.27■□□□□ 0.03
NIP7-201ENST00000254940 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
NIP7-201ENST00000254940 ZPR1O75312 459 aa15.26■□□□□ 0.03
NIP7-201ENST00000254940 RC3H1Q5TC82 1133 aaKnown RBP15.26■□□□□ 0.03
NIP7-201ENST00000254940 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
NIP7-201ENST00000254940 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
NIP7-201ENST00000254940 DNAAF4Q8WXU2 420 aa15.26■□□□□ 0.03
NIP7-201ENST00000254940 ZNF831Q5JPB2 1677 aa15.26■□□□□ 0.03
NIP7-201ENST00000254940 CAMTA2O94983 1202 aa15.26■□□□□ 0.03
NIP7-201ENST00000254940 MVPQ14764 893 aaKnown RBP15.26■□□□□ 0.03
NIP7-201ENST00000254940 BCL2L12Q9HB09 334 aa15.26■□□□□ 0.03
NIP7-201ENST00000254940 NUP98P52948 1817 aa15.25■□□□□ 0.03
NIP7-201ENST00000254940 MAP3K15Q6ZN16 1313 aa15.25■□□□□ 0.03
NIP7-201ENST00000254940 IPO8O15397 1037 aaKnown RBP15.25■□□□□ 0.03
NIP7-201ENST00000254940 GOLGB1Q14789 3259 aaKnown RBP15.25■□□□□ 0.03
NIP7-201ENST00000254940 ERBB4Q15303 1308 aa15.25■□□□□ 0.03
NIP7-201ENST00000254940 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
NIP7-201ENST00000254940 ZBTB7AO95365 584 aa15.24■□□□□ 0.03
NIP7-201ENST00000254940 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
NIP7-201ENST00000254940 IGKV5-2P06315 115 aa15.24■□□□□ 0.03
NIP7-201ENST00000254940 TBC1D9BQ66K14 1250 aa15.24■□□□□ 0.03
NIP7-201ENST00000254940 CENPQQ7L2Z9 268 aaPredicted RBP15.24■□□□□ 0.03
NIP7-201ENST00000254940 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
NIP7-201ENST00000254940 RGPD3A6NKT7 1758 aaPredicted RBP15.24■□□□□ 0.03
NIP7-201ENST00000254940 RGPD4Q7Z3J3 1758 aa15.24■□□□□ 0.03
NIP7-201ENST00000254940 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
NIP7-201ENST00000254940 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
NIP7-201ENST00000254940 AFDNP55196 1824 aaKnown RBP15.23■□□□□ 0.03
NIP7-201ENST00000254940 PTPRCP08575 1304 aa15.23■□□□□ 0.03
NIP7-201ENST00000254940 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
NIP7-201ENST00000254940 USP42Q9H9J4 1324 aaKnown RBP15.22■□□□□ 0.03
NIP7-201ENST00000254940 NUTM1Q86Y26 1132 aa15.22■□□□□ 0.03
NIP7-201ENST00000254940 METTL22Q9BUU2 404 aaPredicted RBP15.22■□□□□ 0.03
NIP7-201ENST00000254940 NARFQ9UHQ1 456 aa15.22■□□□□ 0.03
NIP7-201ENST00000254940 ATF5Q9Y2D1 282 aaPredicted RBP15.22■□□□□ 0.03
NIP7-201ENST00000254940 UBN2Q6ZU65 1347 aa15.22■□□□□ 0.03
NIP7-201ENST00000254940 GYS1P13807 737 aa15.22■□□□□ 0.03
NIP7-201ENST00000254940 BEND3Q5T5X7 828 aa15.22■□□□□ 0.03
NIP7-201ENST00000254940 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
NIP7-201ENST00000254940 MEIS3Q99687 375 aa15.22■□□□□ 0.03
NIP7-201ENST00000254940 ABCC4O15439 1325 aa15.21■□□□□ 0.03
NIP7-201ENST00000254940 SSFA2P28290 1259 aa15.21■□□□□ 0.03
NIP7-201ENST00000254940 GIGYF2Q6Y7W6 1299 aaKnown RBP15.21■□□□□ 0.03
NIP7-201ENST00000254940 PDE4AP27815 886 aa15.21■□□□□ 0.02
NIP7-201ENST00000254940 BRPF1P55201 1214 aaPredicted RBP15.21■□□□□ 0.02
NIP7-201ENST00000254940 FAM89AQ96GI7 184 aa15.21■□□□□ 0.02
NIP7-201ENST00000254940 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.02
NIP7-201ENST00000254940 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.02
NIP7-201ENST00000254940 NBPF7P0C2Y1 421 aaPredicted RBP15.2■□□□□ 0.02
NIP7-201ENST00000254940 NEXNQ0ZGT2 675 aa15.2■□□□□ 0.02
NIP7-201ENST00000254940 TCIRG1Q13488 830 aa15.2■□□□□ 0.02
NIP7-201ENST00000254940 A0A087WZG4 1122 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms