RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 CLEC4GQ6UXB4 293 aa29.19■■■□□ 2.26
APOE-201ENST00000252486 TTLL7Q6ZT98 887 aa29.19■■■□□ 2.26
APOE-201ENST00000252486 NLGN1Q8N2Q7 840 aa29.19■■■□□ 2.26
APOE-201ENST00000252486 BCORQ6W2J9 1755 aa29.18■■■□□ 2.26
APOE-201ENST00000252486 GYS1P13807 737 aa29.18■■■□□ 2.26
APOE-201ENST00000252486 SSH1Q8WYL5 1049 aa29.18■■■□□ 2.26
APOE-201ENST00000252486 RARSP54136 660 aaKnown RBP29.17■■■□□ 2.26
APOE-201ENST00000252486 PHAXQ9H814 394 aaKnown RBP29.17■■■□□ 2.26
APOE-201ENST00000252486 SMC4Q9NTJ3 1288 aa29.17■■■□□ 2.26
APOE-201ENST00000252486 PLBD2Q8NHP8 589 aa29.16■■■□□ 2.26
APOE-201ENST00000252486 FLIIQ13045 1269 aa29.15■■■□□ 2.26
APOE-201ENST00000252486 ANKRD13DQ6ZTN6 518 aa29.15■■■□□ 2.26
APOE-201ENST00000252486 MRPL50Q8N5N7 158 aaKnown RBP29.15■■■□□ 2.26
APOE-201ENST00000252486 ZBTB7AO95365 584 aa29.14■■■□□ 2.26
APOE-201ENST00000252486 BRPF1P55201 1214 aaPredicted RBP29.14■■■□□ 2.26
APOE-201ENST00000252486 ZBTB3Q9H5J0 574 aa29.14■■■□□ 2.26
APOE-201ENST00000252486 GIGYF2Q6Y7W6 1299 aaKnown RBP29.13■■■□□ 2.25
APOE-201ENST00000252486 BCL2L12Q9HB09 334 aa29.13■■■□□ 2.25
APOE-201ENST00000252486 FKBP8Q14318 412 aa29.12■■■□□ 2.25
APOE-201ENST00000252486 HSP90AB3PQ58FF7 597 aa29.12■■■□□ 2.25
APOE-201ENST00000252486 G2E3Q7L622 706 aa29.12■■■□□ 2.25
APOE-201ENST00000252486 FKBP5Q13451 457 aaPredicted RBP29.11■■■□□ 2.25
APOE-201ENST00000252486 RIC3Q7Z5B4 369 aa29.11■■■□□ 2.25
APOE-201ENST00000252486 SPON1Q9HCB6 807 aa29.11■■■□□ 2.25
APOE-201ENST00000252486 COL24A1Q17RW2 1714 aa29.11■■■□□ 2.25
APOE-201ENST00000252486 MSL1Q68DK7 614 aa29.1■■■□□ 2.25
APOE-201ENST00000252486 KSR2Q6VAB6 950 aa29.1■■■□□ 2.25
APOE-201ENST00000252486 BCL2L13Q9BXK5 485 aa29.1■■■□□ 2.25
APOE-201ENST00000252486 PTPRCP08575 1304 aa29.1■■■□□ 2.25
APOE-201ENST00000252486 POLD1P28340 1107 aa29.09■■■□□ 2.25
APOE-201ENST00000252486 HLFQ16534 295 aa29.09■■■□□ 2.25
APOE-201ENST00000252486 KIF16BQ96L93 1317 aa29.09■■■□□ 2.25
APOE-201ENST00000252486 NUP98P52948 1817 aa29.08■■■□□ 2.25
APOE-201ENST00000252486 ATF5Q9Y2D1 282 aaPredicted RBP29.08■■■□□ 2.25
APOE-201ENST00000252486 ATP10DQ9P241 1426 aa29.08■■■□□ 2.25
APOE-201ENST00000252486 TM4SF1P30408 202 aa29.07■■■□□ 2.24
APOE-201ENST00000252486 ARFGEF2Q9Y6D5 1785 aa29.06■■■□□ 2.24
APOE-201ENST00000252486 PI4KAP2A4QPH2 592 aa29.06■■■□□ 2.24
APOE-201ENST00000252486 PI4KAP1Q8N8J0 262 aa29.06■■■□□ 2.24
APOE-201ENST00000252486 SETDB2Q96T68 719 aa29.06■■■□□ 2.24
APOE-201ENST00000252486 RCAN3Q9UKA8 241 aa29.06■■■□□ 2.24
APOE-201ENST00000252486 MMP10P09238 476 aa29.05■■■□□ 2.24
APOE-201ENST00000252486 TCIRG1Q13488 830 aa29.05■■■□□ 2.24
APOE-201ENST00000252486 NFIXQ14938 502 aa29.05■■■□□ 2.24
APOE-201ENST00000252486 TBC1D9BQ66K14 1250 aa29.05■■■□□ 2.24
APOE-201ENST00000252486 ADCY9O60503 1353 aa29.04■■■□□ 2.24
APOE-201ENST00000252486 IPO8O15397 1037 aaKnown RBP29.04■■■□□ 2.24
APOE-201ENST00000252486 METTL22Q9BUU2 404 aaPredicted RBP29.04■■■□□ 2.24
APOE-201ENST00000252486 NIP7Q9Y221 180 aaKnown RBP eCLIP29.04■■■□□ 2.241e-12■□□□□ 8.6
APOE-201ENST00000252486 MAP3K2Q9Y2U5 619 aa29.04■■■□□ 2.24
APOE-201ENST00000252486 PARP3Q9Y6F1 533 aa29.04■■■□□ 2.24
APOE-201ENST00000252486 CARMIL3Q8ND23 1372 aa29.03■■■□□ 2.24
APOE-201ENST00000252486 NEXNQ0ZGT2 675 aa29.03■■■□□ 2.24
APOE-201ENST00000252486 PARP10Q53GL7 1025 aa29.03■■■□□ 2.24
APOE-201ENST00000252486 ZNF34Q8IZ26 560 aa29.03■■■□□ 2.24
APOE-201ENST00000252486 DNAAF4Q8WXU2 420 aa29.03■■■□□ 2.24
APOE-201ENST00000252486 ARHGAP45Q92619 1136 aa29.03■■■□□ 2.24
APOE-201ENST00000252486 ANKRD36CQ5JPF3 1778 aa29.03■■■□□ 2.24
APOE-201ENST00000252486 BCAR3O75815 825 aa29.02■■■□□ 2.24
APOE-201ENST00000252486 BICDL1Q6ZP65 573 aa29.02■■■□□ 2.24
APOE-201ENST00000252486 SGIP1Q9BQI5 828 aa29.02■■■□□ 2.24
APOE-201ENST00000252486 TRIM28Q13263 835 aaKnown RBP29.01■■■□□ 2.23
APOE-201ENST00000252486 API5Q9BZZ5 524 aaKnown RBP29.01■■■□□ 2.23
APOE-201ENST00000252486 NOB1Q9ULX3 412 aaKnown RBP29.01■■■□□ 2.23
APOE-201ENST00000252486 PTGER2P43116 358 aa29■■■□□ 2.23
APOE-201ENST00000252486 POLRMTO00411 1230 aaKnown RBP28.99■■■□□ 2.23
APOE-201ENST00000252486 DDR1Q08345 913 aa28.99■■■□□ 2.23
APOE-201ENST00000252486 ISCA1Q9BUE6 129 aa28.99■■■□□ 2.23
APOE-201ENST00000252486 GPTP24298 496 aa28.98■■■□□ 2.23
APOE-201ENST00000252486 PPP1R42Q7Z4L9 355 aa28.98■■■□□ 2.23
APOE-201ENST00000252486 MYD88Q99836 296 aa28.98■■■□□ 2.23
APOE-201ENST00000252486 NYXQ9GZU5 481 aa28.98■■■□□ 2.23
APOE-201ENST00000252486 IBTKQ9P2D0 1353 aaPredicted RBP28.98■■■□□ 2.23
APOE-201ENST00000252486 SERPINB2P05120 415 aa28.97■■■□□ 2.23
APOE-201ENST00000252486 LRP5O75197 1615 aa28.96■■■□□ 2.23
APOE-201ENST00000252486 NLRP10Q86W26 655 aa28.96■■■□□ 2.23
APOE-201ENST00000252486 CCDC191Q8NCU4 936 aa28.96■■■□□ 2.23
APOE-201ENST00000252486 LINS1Q8NG48 757 aa28.96■■■□□ 2.23
APOE-201ENST00000252486 FRAT1Q92837 279 aaPredicted RBP28.96■■■□□ 2.23
APOE-201ENST00000252486 UBN2Q6ZU65 1347 aa28.95■■■□□ 2.23
APOE-201ENST00000252486 F6X3S4 739 aa28.95■■■□□ 2.22
APOE-201ENST00000252486 ZKSCAN2Q63HK3 967 aa28.95■■■□□ 2.22
APOE-201ENST00000252486 TPTE2Q6XPS3 522 aa28.95■■■□□ 2.22
APOE-201ENST00000252486 NBPF5PQ86XG9 351 aaPredicted RBP28.95■■■□□ 2.22
APOE-201ENST00000252486 PXDNLA1KZ92 1463 aa28.95■■■□□ 2.22
APOE-201ENST00000252486 RNF123Q5XPI4 1314 aa28.94■■■□□ 2.22
APOE-201ENST00000252486 ATP5J2-PTCD1G3V325 749 aa28.94■■■□□ 2.22
APOE-201ENST00000252486 ATF7IPQ6VMQ6 1270 aa28.94■■■□□ 2.22
APOE-201ENST00000252486 NRXN2Q9P2S2 1712 aa28.94■■■□□ 2.22
APOE-201ENST00000252486 NPHP1O15259 732 aa28.93■■■□□ 2.22
APOE-201ENST00000252486 SLC4A10Q6U841 1118 aa28.93■■■□□ 2.22
APOE-201ENST00000252486 CWC25Q9NXE8 425 aaPredicted RBP28.93■■■□□ 2.22
APOE-201ENST00000252486 SUSD4Q5VX71 490 aa28.92■■■□□ 2.22
APOE-201ENST00000252486 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.92■■■□□ 2.22
APOE-201ENST00000252486 CNBD1Q8NA66 436 aa28.92■■■□□ 2.22
APOE-201ENST00000252486 UTP14AQ9BVJ6 771 aaKnown RBP28.92■■■□□ 2.22
APOE-201ENST00000252486 IGKV5-2P06315 115 aa28.91■■■□□ 2.22
APOE-201ENST00000252486 BEND3Q5T5X7 828 aa28.91■■■□□ 2.22
APOE-201ENST00000252486 SRCIN1Q9C0H9 1055 aa28.91■■■□□ 2.22
APOE-201ENST00000252486 PPP1R1BQ9UD71 204 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms