RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 PDIA4P13667 645 aaKnown RBP20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 CCAR1Q8IX12 1150 aaKnown RBP20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 PIK3C2GO75747 1445 aa20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 CCP110O43303 1012 aa20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 DHX8Q14562 1220 aaKnown RBP20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 XAGE3Q8WTP9 111 aa20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 ZNHIT6Q9NWK9 470 aaKnown RBP20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 SNX21Q969T3 373 aa20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 NOL7Q9UMY1 257 aaKnown RBP20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 RBM8AQ9Y5S9 174 aaKnown RBP20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 USP16Q9Y5T5 823 aa20.03■□□□□ 0.8
SLC1A4-201ENST00000234256 UBE2HP62256 183 aa20.02■□□□□ 0.8
SLC1A4-201ENST00000234256 CBX1P83916 185 aa20.02■□□□□ 0.8
SLC1A4-201ENST00000234256 CWF19L2Q2TBE0 894 aaKnown RBP20.02■□□□□ 0.8
SLC1A4-201ENST00000234256 USP48Q86UV5 1035 aa20.02■□□□□ 0.8
SLC1A4-201ENST00000234256 AXDND1Q5T1B0 1012 aaPredicted RBP20.02■□□□□ 0.8
SLC1A4-201ENST00000234256 MICU3Q86XE3 530 aa20.02■□□□□ 0.8
SLC1A4-201ENST00000234256 CPA1P15085 419 aa20.02■□□□□ 0.79
SLC1A4-201ENST00000234256 ZFYVE27Q5T4F4 411 aa20.02■□□□□ 0.79
SLC1A4-201ENST00000234256 UBXN4Q92575 508 aa20.02■□□□□ 0.79
SLC1A4-201ENST00000234256 AK7Q96M32 723 aa20.02■□□□□ 0.79
SLC1A4-201ENST00000234256 EYA1Q99502 592 aa20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 TANGO6Q9C0B7 1094 aa20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 ZSCAN22P10073 491 aaPredicted RBP20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 PHAXQ9H814 394 aaKnown RBP20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 ORC3Q9UBD5 711 aaPredicted RBP20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 DACH1Q9UI36 760 aa20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 KDM2BQ8NHM5 1336 aa20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 DNM1Q05193 864 aaKnown RBP20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 PPIP5K1Q6PFW1 1433 aa20.01■□□□□ 0.79
SLC1A4-201ENST00000234256 RANBP6O60518 1105 aaKnown RBP20■□□□□ 0.79
SLC1A4-201ENST00000234256 POGZQ7Z3K3 1410 aa20■□□□□ 0.79
SLC1A4-201ENST00000234256 SHANK2Q9UPX8 1470 aa20■□□□□ 0.79
SLC1A4-201ENST00000234256 SMTNL1A8MU46 457 aa20■□□□□ 0.79
SLC1A4-201ENST00000234256 IFIT3O14879 490 aaKnown RBP20■□□□□ 0.79
SLC1A4-201ENST00000234256 CBFA2T2O43439 604 aa20■□□□□ 0.79
SLC1A4-201ENST00000234256 DEF6Q9H4E7 631 aa20■□□□□ 0.79
SLC1A4-201ENST00000234256 TRIM35Q9UPQ4 493 aa20■□□□□ 0.79
SLC1A4-201ENST00000234256 TNNT1P13805 278 aa20■□□□□ 0.79
SLC1A4-201ENST00000234256 IFNL2Q8IZJ0 200 aa20■□□□□ 0.79
SLC1A4-201ENST00000234256 SOGA3Q5TF21 947 aa19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 LRSAM1Q6UWE0 723 aa19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 TTC12Q9H892 705 aaPredicted RBP19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 DNMT1P26358 1616 aaKnown RBP19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 CPLX3Q8WVH0 158 aa19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 DDX19AQ9NUU7 478 aaKnown RBP19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 A2MP01023 1474 aa19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 URI1O94763 535 aaPredicted RBP19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 STIM1Q13586 685 aa19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 LMBR1LQ6UX01 489 aa19.99■□□□□ 0.79
SLC1A4-201ENST00000234256 DUOX2Q9NRD8 1548 aa19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 TEX14Q8IWB6 1497 aa19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 GRM8O00222 908 aa19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 HMGB1P09429 215 aaKnown RBP19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 RAB3GAP1Q15042 981 aa19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 ARHGAP29Q52LW3 1261 aa19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 NOM1Q5C9Z4 860 aaKnown RBP19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 TMX1Q9H3N1 280 aa19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 USP5P45974 858 aa19.98■□□□□ 0.79
SLC1A4-201ENST00000234256 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
SLC1A4-201ENST00000234256 ADAMTS2O95450 1211 aa19.97■□□□□ 0.79
SLC1A4-201ENST00000234256 MAP3K12Q12852 859 aa19.97■□□□□ 0.79
SLC1A4-201ENST00000234256 DACT1Q9NYF0 836 aa19.97■□□□□ 0.79
SLC1A4-201ENST00000234256 COL17A1Q9UMD9 1497 aaPredicted RBP19.97■□□□□ 0.79
SLC1A4-201ENST00000234256 SETQ01105 290 aaPredicted RBP19.97■□□□□ 0.79
SLC1A4-201ENST00000234256 SLC12A7Q9Y666 1083 aa19.97■□□□□ 0.79
SLC1A4-201ENST00000234256 MAP3K19Q56UN5 1328 aa19.96■□□□□ 0.79
SLC1A4-201ENST00000234256 USP26Q9BXU7 913 aa19.96■□□□□ 0.79
SLC1A4-201ENST00000234256 HSP90AA4PQ58FG1 418 aa19.96■□□□□ 0.79
SLC1A4-201ENST00000234256 ERICH4A6NGS2 130 aa19.96■□□□□ 0.79
SLC1A4-201ENST00000234256 SNRPA1P09661 255 aaKnown RBP19.96■□□□□ 0.79
SLC1A4-201ENST00000234256 KIF18AQ8NI77 898 aa19.96■□□□□ 0.79
SLC1A4-201ENST00000234256 GOLGA8AA7E2F4 631 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 EPB41L2O43491 1005 aaKnown RBP19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 EIF5P55010 431 aaKnown RBP19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 CHST3Q7LGC8 479 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 WASF1Q92558 559 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 PRM3Q9NNZ6 103 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 CLCN1P35523 988 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 CNNM3Q8NE01 707 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 PIP4K2BP78356 416 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 CABLES1Q8TDN4 633 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 AK2P54819 239 aa19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 ZSCAN29Q8IWY8 852 aaPredicted RBP19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 ERCC4Q92889 916 aaPredicted RBP19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 IQSEC3Q9UPP2 1182 aaPredicted RBP19.95■□□□□ 0.78
SLC1A4-201ENST00000234256 TOP1P11387 765 aaKnown RBP19.94■□□□□ 0.78
SLC1A4-201ENST00000234256 CHMLP26374 656 aa19.94■□□□□ 0.78
SLC1A4-201ENST00000234256 SLC4A8Q2Y0W8 1093 aa19.94■□□□□ 0.78
SLC1A4-201ENST00000234256 KSR2Q6VAB6 950 aa19.94■□□□□ 0.78
SLC1A4-201ENST00000234256 ANKRD18BA2A2Z9 1011 aa19.93■□□□□ 0.78
SLC1A4-201ENST00000234256 RBM5P52756 815 aaKnown RBP eCLIP19.93■□□□□ 0.78
SLC1A4-201ENST00000234256 ANAPC15P60006 121 aa19.93■□□□□ 0.78
SLC1A4-201ENST00000234256 IARSP41252 1262 aaKnown RBP19.93■□□□□ 0.78
SLC1A4-201ENST00000234256 FAM193AP78312 1265 aa19.93■□□□□ 0.78
SLC1A4-201ENST00000234256 TMC6Q7Z403 805 aa19.93■□□□□ 0.78
SLC1A4-201ENST00000234256 NFATC2IPQ8NCF5 419 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms