RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ARHGEF10O15013 1369 aa21.17■□□□□ 0.98
CDKN1B-201ENST00000228872 HAP1P54257 671 aaPredicted RBP21.16■□□□□ 0.98
CDKN1B-201ENST00000228872 SULT6B1Q6IMI4 303 aa21.16■□□□□ 0.98
CDKN1B-201ENST00000228872 KRT28Q7Z3Y7 464 aa21.16■□□□□ 0.98
CDKN1B-201ENST00000228872 BBXQ8WY36 941 aaPredicted RBP21.16■□□□□ 0.98
CDKN1B-201ENST00000228872 FIBPO43427 364 aa21.16■□□□□ 0.98
CDKN1B-201ENST00000228872 ZNF771Q7L3S4 317 aaPredicted RBP21.16■□□□□ 0.98
CDKN1B-201ENST00000228872 RILPL2Q969X0 211 aa21.16■□□□□ 0.98
CDKN1B-201ENST00000228872 GTF2E1P29083 439 aaPredicted RBP21.15■□□□□ 0.98
CDKN1B-201ENST00000228872 AMPHP49418 695 aa21.15■□□□□ 0.98
CDKN1B-201ENST00000228872 SYCP1Q15431 976 aa21.15■□□□□ 0.98
CDKN1B-201ENST00000228872 KCNH5Q8NCM2 988 aa21.15■□□□□ 0.98
CDKN1B-201ENST00000228872 EXOC6BQ9Y2D4 811 aa21.15■□□□□ 0.98
CDKN1B-201ENST00000228872 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.98
CDKN1B-201ENST00000228872 CTNNA3Q9UI47 895 aa21.14■□□□□ 0.98
CDKN1B-201ENST00000228872 STX6O43752 255 aa21.14■□□□□ 0.97
CDKN1B-201ENST00000228872 F13A1P00488 732 aa21.14■□□□□ 0.97
CDKN1B-201ENST00000228872 TUBGCP6Q96RT7 1819 aa21.14■□□□□ 0.97
CDKN1B-201ENST00000228872 HOXC9P31274 260 aa21.13■□□□□ 0.97
CDKN1B-201ENST00000228872 GABPB1Q06547 395 aaPredicted RBP21.13■□□□□ 0.97
CDKN1B-201ENST00000228872 SYT1P21579 422 aa21.13■□□□□ 0.97
CDKN1B-201ENST00000228872 PTGS1P23219 599 aa21.13■□□□□ 0.97
CDKN1B-201ENST00000228872 HSPA4P34932 840 aa21.13■□□□□ 0.97
CDKN1B-201ENST00000228872 LRRCC1Q9C099 1032 aa21.12■□□□□ 0.97
CDKN1B-201ENST00000228872 SMTNL1A8MU46 457 aa21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 IL25Q9H293 177 aa21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 CGNQ9P2M7 1197 aaKnown RBP21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 ATP6V1DQ9Y5K8 247 aa21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 KDRP35968 1356 aa21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 PXDNQ92626 1479 aa21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 CHL1O00533 1208 aa21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 EPB41L2O43491 1005 aaKnown RBP21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 UNC5CLQ8IV45 518 aa21.11■□□□□ 0.97
CDKN1B-201ENST00000228872 NPHP3Q7Z494 1330 aa21.1■□□□□ 0.97
CDKN1B-201ENST00000228872 CCDC192P0DO97 292 aa21.1■□□□□ 0.97
CDKN1B-201ENST00000228872 DDX41Q9UJV9 622 aaKnown RBP21.1■□□□□ 0.97
CDKN1B-201ENST00000228872 IGSF1Q8N6C5 1336 aa21.1■□□□□ 0.97
CDKN1B-201ENST00000228872 TMEM51Q9NW97 253 aa21.1■□□□□ 0.97
CDKN1B-201ENST00000228872 STAP2Q9UGK3 403 aa21.1■□□□□ 0.97
CDKN1B-201ENST00000228872 TTC14Q96N46 770 aa21.09■□□□□ 0.97
CDKN1B-201ENST00000228872 SLC4A2P04920 1241 aa21.09■□□□□ 0.97
CDKN1B-201ENST00000228872 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.09■□□□□ 0.97
CDKN1B-201ENST00000228872 SLC4A10Q6U841 1118 aa21.08■□□□□ 0.97
CDKN1B-201ENST00000228872 SMC3Q9UQE7 1217 aa21.08■□□□□ 0.97
CDKN1B-201ENST00000228872 CRYBG1Q9Y4K1 1723 aa21.08■□□□□ 0.97
CDKN1B-201ENST00000228872 MED1Q15648 1581 aaPredicted RBP21.08■□□□□ 0.96
CDKN1B-201ENST00000228872 GNAI2P04899 355 aa21.08■□□□□ 0.96
CDKN1B-201ENST00000228872 FAM200AQ8TCP9 573 aa21.08■□□□□ 0.96
CDKN1B-201ENST00000228872 IP6K1Q92551 441 aa21.08■□□□□ 0.96
CDKN1B-201ENST00000228872 C16orf45Q96MC5 204 aaPredicted RBP21.08■□□□□ 0.96
CDKN1B-201ENST00000228872 SLFN14P0C7P3 912 aa21.07■□□□□ 0.96
CDKN1B-201ENST00000228872 CCT4P50991 539 aaKnown RBP21.07■□□□□ 0.96
CDKN1B-201ENST00000228872 AK2P54819 239 aa21.07■□□□□ 0.96
CDKN1B-201ENST00000228872 DNM1Q05193 864 aaKnown RBP21.07■□□□□ 0.96
CDKN1B-201ENST00000228872 F6X3S4 739 aa21.07■□□□□ 0.96
CDKN1B-201ENST00000228872 GCP02774 474 aa21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 RUFY3Q7L099 469 aa21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 CCDC186Q7Z3E2 898 aa21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 LIMCH1Q9UPQ0 1083 aa21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 SNX14Q9Y5W7 946 aa21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 MORC2Q9Y6X9 1032 aaPredicted RBP21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 TNS3Q68CZ2 1445 aa21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 LRMPQ12912 555 aa21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 NAA30Q147X3 362 aaPredicted RBP21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 EYA1Q99502 592 aa21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 LARP6Q9BRS8 491 aaKnown RBP21.06■□□□□ 0.96
CDKN1B-201ENST00000228872 TNNT1P13805 278 aa21.05■□□□□ 0.96
CDKN1B-201ENST00000228872 G2E3Q7L622 706 aa21.05■□□□□ 0.96
CDKN1B-201ENST00000228872 MTMR6Q9Y217 621 aa21.05■□□□□ 0.96
CDKN1B-201ENST00000228872 BRINP3Q76B58 766 aa21.04■□□□□ 0.96
CDKN1B-201ENST00000228872 RAD50Q92878 1312 aa21.04■□□□□ 0.96
CDKN1B-201ENST00000228872 ARHGEF25Q86VW2 580 aa21.04■□□□□ 0.96
CDKN1B-201ENST00000228872 MRVI1Q9Y6F6 885 aa21.04■□□□□ 0.96
CDKN1B-201ENST00000228872 PNMA6EA0A0J9YXQ4 647 aa21.03■□□□□ 0.96
CDKN1B-201ENST00000228872 MCM10Q7L590 875 aa21.03■□□□□ 0.96
CDKN1B-201ENST00000228872 CCDC112Q8NEF3 446 aa21.03■□□□□ 0.96
CDKN1B-201ENST00000228872 KIF18AQ8NI77 898 aa21.03■□□□□ 0.96
CDKN1B-201ENST00000228872 PAXBP1Q9Y5B6 917 aa21.03■□□□□ 0.96
CDKN1B-201ENST00000228872 LUZP1Q86V48 1076 aa21.03■□□□□ 0.96
CDKN1B-201ENST00000228872 AOX1Q06278 1338 aa21.03■□□□□ 0.96
CDKN1B-201ENST00000228872 TYRO3Q06418 890 aa21.02■□□□□ 0.96
CDKN1B-201ENST00000228872 SLAIN2Q9P270 581 aa21.02■□□□□ 0.96
CDKN1B-201ENST00000228872 CAMTA1Q9Y6Y1 1673 aa21.02■□□□□ 0.96
CDKN1B-201ENST00000228872 LMOD2Q6P5Q4 547 aa21.02■□□□□ 0.96
CDKN1B-201ENST00000228872 DDX17Q92841 729 aaKnown RBP21.02■□□□□ 0.96
CDKN1B-201ENST00000228872 RGPD2P0DJD1 1756 aa21.02■□□□□ 0.96
CDKN1B-201ENST00000228872 LARGE1O95461 756 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 MAP3K11Q16584 847 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 ZSCAN25Q6NSZ9 544 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 NRBP1Q9UHY1 535 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 NHSL1Q5SYE7 1610 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 GJB2P29033 226 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 ATP8B2P98198 1209 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 RASEFQ8IZ41 740 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 SPATA31A3Q5VYP0 1347 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 DRC7Q8IY82 874 aa21.01■□□□□ 0.95
CDKN1B-201ENST00000228872 RGPD5Q99666 1765 aa21■□□□□ 0.95
CDKN1B-201ENST00000228872 SGSM2O43147 1006 aa21■□□□□ 0.95
CDKN1B-201ENST00000228872 TERF2Q15554 542 aa21■□□□□ 0.95
CDKN1B-201ENST00000228872 NUP62CLQ9H1M0 184 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms