RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 USP44Q9H0E7 712 aa20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 ZNF330Q9Y3S2 320 aaPredicted RBP20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 RREB1Q92766 1687 aa20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 IGHDP01880 384 aa20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 CENPQQ7L2Z9 268 aaPredicted RBP20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 LINC00116Q8NCU8 138 aa20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 RWDD1Q9H446 243 aaPredicted RBP20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 C1orf115Q9H7X2 142 aa20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 CCNL1Q9UK58 526 aaPredicted RBP20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 ARFGEF2Q9Y6D5 1785 aa20.05■□□□□ 0.8
SNRPD3-201ENST00000215829 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
SNRPD3-201ENST00000215829 IBTKQ9P2D0 1353 aaPredicted RBP20.04■□□□□ 0.8
SNRPD3-201ENST00000215829 MYH14Q7Z406 1995 aaKnown RBP20.04■□□□□ 0.8
SNRPD3-201ENST00000215829 IGKV5-2P06315 115 aa20.04■□□□□ 0.8
SNRPD3-201ENST00000215829 KCNQ4P56696 695 aa20.04■□□□□ 0.8
SNRPD3-201ENST00000215829 CWF19L2Q2TBE0 894 aaKnown RBP20.04■□□□□ 0.8
SNRPD3-201ENST00000215829 KIF6Q6ZMV9 814 aa20.04■□□□□ 0.8
SNRPD3-201ENST00000215829 MYD88Q99836 296 aa20.04■□□□□ 0.8
SNRPD3-201ENST00000215829 HDAC1Q13547 482 aaPredicted RBP20.03■□□□□ 0.8
SNRPD3-201ENST00000215829 NPM2Q86SE8 214 aaKnown RBP20.03■□□□□ 0.8
SNRPD3-201ENST00000215829 ZBTB3Q9H5J0 574 aa20.03■□□□□ 0.8
SNRPD3-201ENST00000215829 EP400Q96L91 3159 aa20.03■□□□□ 0.8
SNRPD3-201ENST00000215829 NUP188Q5SRE5 1749 aa20.03■□□□□ 0.8
SNRPD3-201ENST00000215829 CNTNAP4Q9C0A0 1308 aa20.03■□□□□ 0.8
SNRPD3-201ENST00000215829 GNAI2P04899 355 aa20.03■□□□□ 0.8
SNRPD3-201ENST00000215829 RC3H1Q5TC82 1133 aaKnown RBP20.03■□□□□ 0.8
SNRPD3-201ENST00000215829 NEURL1BA8MQ27 555 aa20.02■□□□□ 0.8
SNRPD3-201ENST00000215829 MAP3K15Q6ZN16 1313 aa20.02■□□□□ 0.79
SNRPD3-201ENST00000215829 UBTFL1P0CB47 393 aaPredicted RBP20.01■□□□□ 0.79
SNRPD3-201ENST00000215829 RPAP2Q8IXW5 612 aaPredicted RBP20■□□□□ 0.79
SNRPD3-201ENST00000215829 ARXQ96QS3 562 aa20■□□□□ 0.79
SNRPD3-201ENST00000215829 C9orf78Q9NZ63 289 aaPredicted RBP20■□□□□ 0.79
SNRPD3-201ENST00000215829 ERVV-1B6SEH8 477 aa20■□□□□ 0.79
SNRPD3-201ENST00000215829 NBPF7P0C2Y1 421 aaPredicted RBP20■□□□□ 0.79
SNRPD3-201ENST00000215829 GCKRQ14397 625 aa20■□□□□ 0.79
SNRPD3-201ENST00000215829 SLC27A3Q5K4L6 730 aa20■□□□□ 0.79
SNRPD3-201ENST00000215829 DZIP3Q86Y13 1208 aaKnown RBP20■□□□□ 0.79
SNRPD3-201ENST00000215829 SIRT2Q8IXJ6 389 aa20■□□□□ 0.79
SNRPD3-201ENST00000215829 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
SNRPD3-201ENST00000215829 ATP5J2-PTCD1G3V325 749 aa19.99■□□□□ 0.79
SNRPD3-201ENST00000215829 TCIRG1Q13488 830 aa19.99■□□□□ 0.79
SNRPD3-201ENST00000215829 CEP85Q6P2H3 762 aa19.99■□□□□ 0.79
SNRPD3-201ENST00000215829 ANKRD44Q8N8A2 993 aa19.99■□□□□ 0.79
SNRPD3-201ENST00000215829 UTYO14607 1347 aa19.99■□□□□ 0.79
SNRPD3-201ENST00000215829 GRM8O00222 908 aa19.98■□□□□ 0.79
SNRPD3-201ENST00000215829 GIGYF2Q6Y7W6 1299 aaKnown RBP19.98■□□□□ 0.79
SNRPD3-201ENST00000215829 LRRC4BQ9NT99 713 aa19.98■□□□□ 0.79
SNRPD3-201ENST00000215829 TBC1D2BQ9UPU7 963 aa19.98■□□□□ 0.79
SNRPD3-201ENST00000215829 HDAC5Q9UQL6 1122 aa19.98■□□□□ 0.79
SNRPD3-201ENST00000215829 PLSCR1O15162 318 aa19.98■□□□□ 0.79
SNRPD3-201ENST00000215829 LRRFIP2Q9Y608 721 aaKnown RBP19.98■□□□□ 0.79
SNRPD3-201ENST00000215829 HLFQ16534 295 aa19.97■□□□□ 0.79
SNRPD3-201ENST00000215829 ISCA1Q9BUE6 129 aa19.97■□□□□ 0.79
SNRPD3-201ENST00000215829 AFDNP55196 1824 aaKnown RBP19.97■□□□□ 0.79
SNRPD3-201ENST00000215829 COL15A1P39059 1388 aa19.96■□□□□ 0.79
SNRPD3-201ENST00000215829 A0A087WZG4 1122 aa19.96■□□□□ 0.79
SNRPD3-201ENST00000215829 RPS6KA4O75676 772 aa19.96■□□□□ 0.79
SNRPD3-201ENST00000215829 APBA3O96018 575 aa19.96■□□□□ 0.79
SNRPD3-201ENST00000215829 TRIM28Q13263 835 aaKnown RBP19.96■□□□□ 0.79
SNRPD3-201ENST00000215829 HSP90AB3PQ58FF7 597 aa19.96■□□□□ 0.79
SNRPD3-201ENST00000215829 CCDC191Q8NCU4 936 aa19.96■□□□□ 0.79
SNRPD3-201ENST00000215829 HMGB2P26583 209 aaKnown RBP19.95■□□□□ 0.78
SNRPD3-201ENST00000215829 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
SNRPD3-201ENST00000215829 C4BP0C0L5 1744 aa19.94■□□□□ 0.78
SNRPD3-201ENST00000215829 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
SNRPD3-201ENST00000215829 TXNRD1Q16881 649 aa19.94■□□□□ 0.78
SNRPD3-201ENST00000215829 PROM2Q8N271 834 aa19.94■□□□□ 0.78
SNRPD3-201ENST00000215829 NUP98P52948 1817 aa19.94■□□□□ 0.78
SNRPD3-201ENST00000215829 GNPATO15228 680 aa19.93■□□□□ 0.78
SNRPD3-201ENST00000215829 CAMTA2O94983 1202 aa19.93■□□□□ 0.78
SNRPD3-201ENST00000215829 SMC5Q8IY18 1101 aa19.93■□□□□ 0.78
SNRPD3-201ENST00000215829 RTCBQ9Y3I0 505 aaKnown RBP19.93■□□□□ 0.78
SNRPD3-201ENST00000215829 H7C1W4 665 aa19.93■□□□□ 0.78
SNRPD3-201ENST00000215829 HMMRO75330 724 aa19.93■□□□□ 0.78
SNRPD3-201ENST00000215829 GCC1Q96CN9 775 aa19.92■□□□□ 0.78
SNRPD3-201ENST00000215829 TNS1Q9HBL0 1735 aaKnown RBP19.92■□□□□ 0.78
SNRPD3-201ENST00000215829 SUCLG2Q96I99 432 aa19.91■□□□□ 0.78
SNRPD3-201ENST00000215829 AK7Q96M32 723 aa19.91■□□□□ 0.78
SNRPD3-201ENST00000215829 ANKRD36CQ5JPF3 1778 aa19.91■□□□□ 0.78
SNRPD3-201ENST00000215829 CASP7P55210 303 aa19.9■□□□□ 0.78
SNRPD3-201ENST00000215829 UBE3BQ7Z3V4 1068 aa19.9■□□□□ 0.78
SNRPD3-201ENST00000215829 ZNF34Q8IZ26 560 aa19.9■□□□□ 0.78
SNRPD3-201ENST00000215829 KAZALD1Q96I82 304 aa19.9■□□□□ 0.78
SNRPD3-201ENST00000215829 DCTPP1Q9H773 170 aa19.9■□□□□ 0.78
SNRPD3-201ENST00000215829 PNMA6EA0A0J9YXQ4 647 aa19.9■□□□□ 0.78
SNRPD3-201ENST00000215829 RGL2O15211 777 aa19.9■□□□□ 0.78
SNRPD3-201ENST00000215829 CLEC4GQ6UXB4 293 aa19.9■□□□□ 0.78
SNRPD3-201ENST00000215829 GPTP24298 496 aa19.89■□□□□ 0.77
SNRPD3-201ENST00000215829 MTX1Q13505 466 aa19.89■□□□□ 0.77
SNRPD3-201ENST00000215829 PPP1R42Q7Z4L9 355 aa19.89■□□□□ 0.77
SNRPD3-201ENST00000215829 NLRP10Q86W26 655 aa19.89■□□□□ 0.77
SNRPD3-201ENST00000215829 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
SNRPD3-201ENST00000215829 NARFQ9UHQ1 456 aa19.89■□□□□ 0.77
SNRPD3-201ENST00000215829 ZNF652Q9Y2D9 606 aa19.89■□□□□ 0.77
SNRPD3-201ENST00000215829 SMIM5Q71RC9 77 aa19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 AMIGO3Q86WK7 504 aa19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 SSH3Q8TE77 659 aa19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 BCORQ6W2J9 1755 aa19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 POLA2Q14181 598 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms