RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FLIIQ13045 1269 aa15.78■□□□□ 0.12
TGFBR3-201ENST00000212355 PPP1R42Q7Z4L9 355 aa15.78■□□□□ 0.12
TGFBR3-201ENST00000212355 WASF1Q92558 559 aa15.78■□□□□ 0.12
TGFBR3-201ENST00000212355 MAP2K1Q02750 393 aaPredicted RBP15.78■□□□□ 0.12
TGFBR3-201ENST00000212355 RRP9O43818 475 aaKnown RBP15.78■□□□□ 0.12
TGFBR3-201ENST00000212355 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
TGFBR3-201ENST00000212355 ZPR1O75312 459 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 PPARDQ03181 441 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 ANKLE2Q86XL3 938 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 KIF18AQ8NI77 898 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 UBE3BQ7Z3V4 1068 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 PI4KAP2A4QPH2 592 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 IGSF3O75054 1194 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 JAKMIP3Q5VZ66 844 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 LARP1Q6PKG0 1096 aaKnown RBP15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 PI4KAP1Q8N8J0 262 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 CCDC97Q96F63 343 aaPredicted RBP15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 SBNO2Q9Y2G9 1366 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 NAIPQ13075 1403 aa15.77■□□□□ 0.12
TGFBR3-201ENST00000212355 LUZP1Q86V48 1076 aa15.77■□□□□ 0.11
TGFBR3-201ENST00000212355 TMEM67Q5HYA8 995 aa15.77■□□□□ 0.11
TGFBR3-201ENST00000212355 TCERG1LQ5VWI1 586 aa15.77■□□□□ 0.11
TGFBR3-201ENST00000212355 MYO1BO43795 1136 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 IFFO1Q0D2I5 559 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 ZNF444Q8N0Y2 327 aaPredicted RBP15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 MEIS3Q99687 375 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 TMCO5BA8MYB1 307 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 F8W031 263 aaPredicted RBP15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 FAM170AA1A519 330 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 IDEP14735 1019 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 SLC39A6Q13433 755 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 SF3B2Q13435 895 aaKnown RBP15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 FKBP15Q5T1M5 1219 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 JAG2Q9Y219 1238 aa15.76■□□□□ 0.11
TGFBR3-201ENST00000212355 GPATCH11Q8N954 259 aa15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 ATAD2Q6PL18 1390 aa15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 MTIF2P46199 727 aaKnown RBP15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 PCDHB15Q9Y5E8 787 aa15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 PTPN23Q9H3S7 1636 aa15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 PA2G4Q9UQ80 394 aaKnown RBP15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 HLTFQ14527 1009 aaKnown RBP eCLIP15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 IQCEQ6IPM2 695 aa15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 AKAP2Q9Y2D5 859 aa15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 IPO4Q8TEX9 1081 aaKnown RBP15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 GSTTP1A0A1W2PQM5 241 aa15.75■□□□□ 0.11
TGFBR3-201ENST00000212355 SDSP20132 328 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 PTGS1P23219 599 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 TTC22Q5TAA0 569 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 KRT24Q2M2I5 525 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 ANO6Q4KMQ2 910 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 CTCFLQ8NI51 663 aaPredicted RBP15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 ACSBG1Q96GR2 724 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 CHPF2Q9P2E5 772 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 RXRAP19793 462 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 ZRSR2Q15696 482 aaKnown RBP15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 USP48Q86UV5 1035 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 TMX3Q96JJ7 454 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 MAP3K12Q12852 859 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 TSG101Q99816 390 aa15.74■□□□□ 0.11
TGFBR3-201ENST00000212355 PUF60Q9UHX1 559 aaKnown RBP15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 TROQ12816 1431 aaPredicted RBP15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 NOP2P46087 812 aaKnown RBP15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 CEP135Q66GS9 1140 aa15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 JADE2Q9NQC1 790 aa15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 CAMSAP2Q08AD1 1489 aa15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 ZSCAN12O43309 604 aa15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 SLC5A1P13866 664 aa15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 LMAN1P49257 510 aa15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 ALDH1L2Q3SY69 923 aa15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 SNW1Q13573 536 aaKnown RBP15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 SCAND2PQ9GZW5 306 aaPredicted RBP15.73■□□□□ 0.11
TGFBR3-201ENST00000212355 RGS22Q8NE09 1264 aa15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 ORC3Q9UBD5 711 aaPredicted RBP15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 CCDC194A0A1B0GVG4 234 aa15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 ANKRD18BA2A2Z9 1011 aa15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 GOLGA6L7A0A1B0GV03 622 aa15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 C6orf229H3BNL8 230 aa15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 METAP2P50579 478 aaKnown RBP eCLIP15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 BRF1Q92994 677 aa15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 NEK1Q96PY6 1258 aa15.72■□□□□ 0.11
TGFBR3-201ENST00000212355 SEC24BO95487 1268 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 MAATS1Q7Z4T9 603 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 PLIN2Q99541 437 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 AMOTL2Q9Y2J4 779 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 ZNF165P49910 485 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 CCDC12Q8WUD4 166 aaPredicted RBP15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 SHTN1A0MZ66 631 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 TTLL12Q14166 644 aaPredicted RBP15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 ANKRD18AQ8IVF6 992 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 SLC52A1Q9NWF4 448 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 DNM1Q05193 864 aaKnown RBP15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 STX1AQ16623 288 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 LDHAL6AQ6ZMR3 332 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 EVI5LQ96CN4 794 aa15.71■□□□□ 0.11
TGFBR3-201ENST00000212355 ANAPC15P60006 121 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms