RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 C1orf115Q9H7X2 142 aa27.66■■■□□ 2.02
HOXC8-201ENST00000040584 N4BP2Q86UW6 1770 aaPredicted RBP27.65■■■□□ 2.02
HOXC8-201ENST00000040584 CRKLP46109 303 aaKnown RBP27.65■■■□□ 2.02
HOXC8-201ENST00000040584 INTS5Q6P9B9 1019 aaKnown RBP27.65■■■□□ 2.02
HOXC8-201ENST00000040584 CICQ96RK0 1608 aaPredicted RBP27.64■■■□□ 2.02
HOXC8-201ENST00000040584 PLBD2Q8NHP8 589 aa27.64■■■□□ 2.02
HOXC8-201ENST00000040584 CCDC87Q9NVE4 849 aa27.64■■■□□ 2.01
HOXC8-201ENST00000040584 ATP10DQ9P241 1426 aa27.63■■■□□ 2.01
HOXC8-201ENST00000040584 ZNF831Q5JPB2 1677 aa27.63■■■□□ 2.01
HOXC8-201ENST00000040584 LINC00116Q8NCU8 138 aa27.63■■■□□ 2.01
HOXC8-201ENST00000040584 METTL22Q9BUU2 404 aaPredicted RBP27.62■■■□□ 2.01
HOXC8-201ENST00000040584 CCNL1Q9UK58 526 aaPredicted RBP27.62■■■□□ 2.01
HOXC8-201ENST00000040584 IGHDP01880 384 aa27.61■■■□□ 2.01
HOXC8-201ENST00000040584 CWF19L2Q2TBE0 894 aaKnown RBP27.61■■■□□ 2.01
HOXC8-201ENST00000040584 ZBTB3Q9H5J0 574 aa27.61■■■□□ 2.01
HOXC8-201ENST00000040584 IL6STP40189 918 aaPredicted RBP27.6■■■□□ 2.01
HOXC8-201ENST00000040584 ARXQ96QS3 562 aa27.6■■■□□ 2.01
HOXC8-201ENST00000040584 MYD88Q99836 296 aa27.6■■■□□ 2.01
HOXC8-201ENST00000040584 USP44Q9H0E7 712 aa27.6■■■□□ 2.01
HOXC8-201ENST00000040584 LINS1Q8NG48 757 aa27.59■■■□□ 2.01
HOXC8-201ENST00000040584 LY75O60449 1722 aa27.59■■■□□ 2.01
HOXC8-201ENST00000040584 COL5A3P25940 1745 aaPredicted RBP27.59■■■□□ 2.01
HOXC8-201ENST00000040584 IGKV5-2P06315 115 aa27.59■■■□□ 2.01
HOXC8-201ENST00000040584 NEXNQ0ZGT2 675 aa27.59■■■□□ 2.01
HOXC8-201ENST00000040584 MYH14Q7Z406 1995 aaKnown RBP27.59■■■□□ 2.01
HOXC8-201ENST00000040584 ARFGEF2Q9Y6D5 1785 aa27.58■■■□□ 2.01
HOXC8-201ENST00000040584 ALDH1L1O75891 902 aa27.58■■■□□ 2.01
HOXC8-201ENST00000040584 EIF5P55010 431 aaKnown RBP27.57■■■□□ 2
HOXC8-201ENST00000040584 KIF6Q6ZMV9 814 aa27.57■■■□□ 2
HOXC8-201ENST00000040584 GNAI3P08754 354 aa27.56■■■□□ 2
HOXC8-201ENST00000040584 NPM2Q86SE8 214 aaKnown RBP27.56■■■□□ 2
HOXC8-201ENST00000040584 RREB1Q92766 1687 aa27.56■■■□□ 2
HOXC8-201ENST00000040584 HDAC1Q13547 482 aaPredicted RBP27.55■■■□□ 2
HOXC8-201ENST00000040584 RWDD1Q9H446 243 aaPredicted RBP27.55■■■□□ 2
HOXC8-201ENST00000040584 NUP188Q5SRE5 1749 aa27.55■■■□□ 2
HOXC8-201ENST00000040584 NEURL1BA8MQ27 555 aa27.55■■■□□ 2
HOXC8-201ENST00000040584 ATP5J2-PTCD1G3V325 749 aa27.55■■■□□ 2
HOXC8-201ENST00000040584 DDRGK1Q96HY6 314 aa27.55■■■□□ 2
HOXC8-201ENST00000040584 CNTNAP4Q9C0A0 1308 aa27.54■■■□□ 2
HOXC8-201ENST00000040584 NBPF7P0C2Y1 421 aaPredicted RBP27.54■■■□□ 2
HOXC8-201ENST00000040584 LRRC4BQ9NT99 713 aa27.54■■■□□ 2
HOXC8-201ENST00000040584 TBC1D2BQ9UPU7 963 aa27.54■■■□□ 2
HOXC8-201ENST00000040584 MAP3K15Q6ZN16 1313 aa27.53■■■□□ 2
HOXC8-201ENST00000040584 GNAI2P04899 355 aa27.53■■■□□ 2
HOXC8-201ENST00000040584 DZIP3Q86Y13 1208 aaKnown RBP27.53■■■□□ 2
HOXC8-201ENST00000040584 UBTFL1P0CB47 393 aaPredicted RBP27.53■■■□□ 2
HOXC8-201ENST00000040584 C9orf78Q9NZ63 289 aaPredicted RBP27.53■■■□□ 2
HOXC8-201ENST00000040584 SIRT2Q8IXJ6 389 aa27.52■■■□□ 2
HOXC8-201ENST00000040584 RC3H1Q5TC82 1133 aaKnown RBP27.51■■□□□ 1.99
HOXC8-201ENST00000040584 APBA3O96018 575 aa27.51■■□□□ 1.99
HOXC8-201ENST00000040584 GCKRQ14397 625 aa27.51■■□□□ 1.99
HOXC8-201ENST00000040584 HLFQ16534 295 aa27.51■■□□□ 1.99
HOXC8-201ENST00000040584 LRRFIP2Q9Y608 721 aaKnown RBP27.51■■□□□ 1.99
HOXC8-201ENST00000040584 IBTKQ9P2D0 1353 aaPredicted RBP27.5■■□□□ 1.99
HOXC8-201ENST00000040584 GRM8O00222 908 aa27.49■■□□□ 1.99
HOXC8-201ENST00000040584 CEP85Q6P2H3 762 aa27.49■■□□□ 1.99
HOXC8-201ENST00000040584 TAF1LQ8IZX4 1826 aa27.49■■□□□ 1.99
HOXC8-201ENST00000040584 TCIRG1Q13488 830 aa27.49■■□□□ 1.99
HOXC8-201ENST00000040584 SLC27A3Q5K4L6 730 aa27.49■■□□□ 1.99
HOXC8-201ENST00000040584 SMIM5Q71RC9 77 aa27.49■■□□□ 1.99
HOXC8-201ENST00000040584 COL15A1P39059 1388 aa27.48■■□□□ 1.99
HOXC8-201ENST00000040584 GIGYF2Q6Y7W6 1299 aaKnown RBP27.48■■□□□ 1.99
HOXC8-201ENST00000040584 ANKRD44Q8N8A2 993 aa27.48■■□□□ 1.99
HOXC8-201ENST00000040584 GNPATO15228 680 aa27.47■■□□□ 1.99
HOXC8-201ENST00000040584 FAM161AQ3B820 660 aa27.47■■□□□ 1.99
HOXC8-201ENST00000040584 RPAP2Q8IXW5 612 aaPredicted RBP27.47■■□□□ 1.99
HOXC8-201ENST00000040584 PROM2Q8N271 834 aa27.47■■□□□ 1.99
HOXC8-201ENST00000040584 AFDNP55196 1824 aaKnown RBP27.47■■□□□ 1.99
HOXC8-201ENST00000040584 ERVV-1B6SEH8 477 aa27.47■■□□□ 1.99
HOXC8-201ENST00000040584 RPS6KA4O75676 772 aa27.46■■□□□ 1.99
HOXC8-201ENST00000040584 TXNRD1Q16881 649 aa27.46■■□□□ 1.99
HOXC8-201ENST00000040584 ISCA1Q9BUE6 129 aa27.46■■□□□ 1.99
HOXC8-201ENST00000040584 UTYO14607 1347 aa27.46■■□□□ 1.99
HOXC8-201ENST00000040584 PLSCR1O15162 318 aa27.45■■□□□ 1.99
HOXC8-201ENST00000040584 JARID2Q92833 1246 aaPredicted RBP27.45■■□□□ 1.99
HOXC8-201ENST00000040584 C4BP0C0L5 1744 aa27.45■■□□□ 1.98
HOXC8-201ENST00000040584 CWC25Q9NXE8 425 aaPredicted RBP27.44■■□□□ 1.98
HOXC8-201ENST00000040584 A0A087WZG4 1122 aa27.44■■□□□ 1.98
HOXC8-201ENST00000040584 CAMTA2O94983 1202 aa27.44■■□□□ 1.98
HOXC8-201ENST00000040584 CCDC191Q8NCU4 936 aa27.44■■□□□ 1.98
HOXC8-201ENST00000040584 AMIGO3Q86WK7 504 aa27.43■■□□□ 1.98
HOXC8-201ENST00000040584 SMC5Q8IY18 1101 aa27.43■■□□□ 1.98
HOXC8-201ENST00000040584 RTCBQ9Y3I0 505 aaKnown RBP27.43■■□□□ 1.98
HOXC8-201ENST00000040584 HSP90AB3PQ58FF7 597 aa27.42■■□□□ 1.98
HOXC8-201ENST00000040584 AK7Q96M32 723 aa27.42■■□□□ 1.98
HOXC8-201ENST00000040584 GPTP24298 496 aa27.42■■□□□ 1.98
HOXC8-201ENST00000040584 UBE3BQ7Z3V4 1068 aa27.42■■□□□ 1.98
HOXC8-201ENST00000040584 SUCLG2Q96I99 432 aa27.42■■□□□ 1.98
HOXC8-201ENST00000040584 TNS1Q9HBL0 1735 aaKnown RBP27.42■■□□□ 1.98
HOXC8-201ENST00000040584 TRIM28Q13263 835 aaKnown RBP27.41■■□□□ 1.98
HOXC8-201ENST00000040584 SKAP1Q86WV1 359 aa27.41■■□□□ 1.98
HOXC8-201ENST00000040584 NUP98P52948 1817 aa27.41■■□□□ 1.98
HOXC8-201ENST00000040584 ATP8B2P98198 1209 aa27.4■■□□□ 1.98
HOXC8-201ENST00000040584 PNMA6EA0A0J9YXQ4 647 aa27.4■■□□□ 1.98
HOXC8-201ENST00000040584 KAZALD1Q96I82 304 aa27.4■■□□□ 1.98
HOXC8-201ENST00000040584 HDAC5Q9UQL6 1122 aa27.4■■□□□ 1.98
HOXC8-201ENST00000040584 H7C1W4 665 aa27.39■■□□□ 1.98
HOXC8-201ENST00000040584 RTL5Q5HYW3 569 aaPredicted RBP27.39■■□□□ 1.98
HOXC8-201ENST00000040584 PHF14O94880 888 aa27.38■■□□□ 1.97
HOXC8-201ENST00000040584 CASP7P55210 303 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms