RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 PNISRQ8TF01 805 aaKnown RBP21.07■□□□□ 0.96
ERCC1-201ENST00000013807 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
ERCC1-201ENST00000013807 NFKBIEO00221 500 aa21.06■□□□□ 0.96
ERCC1-201ENST00000013807 SRGNP10124 158 aa21.06■□□□□ 0.96
ERCC1-201ENST00000013807 RASSF7Q02833 373 aa21.06■□□□□ 0.96
ERCC1-201ENST00000013807 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
ERCC1-201ENST00000013807 KLRG2A4D1S0 409 aaPredicted RBP21.05■□□□□ 0.96
ERCC1-201ENST00000013807 NFE2L2Q16236 605 aa21.05■□□□□ 0.96
ERCC1-201ENST00000013807 STYK1Q6J9G0 422 aa21.05■□□□□ 0.96
ERCC1-201ENST00000013807 CNKSR1Q969H4 720 aa21.05■□□□□ 0.96
ERCC1-201ENST00000013807 LTBP3Q9NS15 1303 aa21.04■□□□□ 0.96
ERCC1-201ENST00000013807 GLTPD2A6NH11 291 aa21.04■□□□□ 0.96
ERCC1-201ENST00000013807 PIP4K2AP48426 406 aaPredicted RBP21.04■□□□□ 0.96
ERCC1-201ENST00000013807 ST5P78524 1137 aa21.04■□□□□ 0.96
ERCC1-201ENST00000013807 FSTL1Q12841 308 aa21.04■□□□□ 0.96
ERCC1-201ENST00000013807 RALBP1Q15311 655 aa21.03■□□□□ 0.96
ERCC1-201ENST00000013807 ZNF622Q969S3 477 aaKnown RBP eCLIP21.03■□□□□ 0.96
ERCC1-201ENST00000013807 RRAGCQ9HB90 399 aa21.03■□□□□ 0.96
ERCC1-201ENST00000013807 WDR90Q96KV7 1748 aa21.03■□□□□ 0.96
ERCC1-201ENST00000013807 EIF4A1P60842 406 aaKnown RBP21.02■□□□□ 0.96
ERCC1-201ENST00000013807 CCDC24Q8N4L8 307 aa21.02■□□□□ 0.96
ERCC1-201ENST00000013807 DNAJC5GQ8N7S2 189 aa21.02■□□□□ 0.96
ERCC1-201ENST00000013807 MASTLQ96GX5 879 aa21.02■□□□□ 0.96
ERCC1-201ENST00000013807 MIS18AQ9NYP9 233 aa21.02■□□□□ 0.96
ERCC1-201ENST00000013807 TPTE2Q6XPS3 522 aa21.01■□□□□ 0.95
ERCC1-201ENST00000013807 C16orf71Q8IYS4 520 aaPredicted RBP21.01■□□□□ 0.95
ERCC1-201ENST00000013807 ERVV-1B6SEH8 477 aa21■□□□□ 0.95
ERCC1-201ENST00000013807 C21orf2O43822 256 aa21■□□□□ 0.95
ERCC1-201ENST00000013807 SOGA3Q5TF21 947 aa21■□□□□ 0.95
ERCC1-201ENST00000013807 NBPF5PQ86XG9 351 aaPredicted RBP21■□□□□ 0.95
ERCC1-201ENST00000013807 C7orf43Q8WVR3 580 aa21■□□□□ 0.95
ERCC1-201ENST00000013807 NIP7Q9Y221 180 aaKnown RBP eCLIP20.99■□□□□ 0.95
ERCC1-201ENST00000013807 VEGFAP15692 232 aaPredicted RBP20.98■□□□□ 0.95
ERCC1-201ENST00000013807 HLFQ16534 295 aa20.98■□□□□ 0.95
ERCC1-201ENST00000013807 PRPF40BQ6NWY9 871 aaKnown RBP20.98■□□□□ 0.95
ERCC1-201ENST00000013807 BABAM1Q9NWV8 329 aa20.98■□□□□ 0.95
ERCC1-201ENST00000013807 NPHP1O15259 732 aa20.97■□□□□ 0.95
ERCC1-201ENST00000013807 NPR1P16066 1061 aa20.97■□□□□ 0.95
ERCC1-201ENST00000013807 ERBB4Q15303 1308 aa20.97■□□□□ 0.95
ERCC1-201ENST00000013807 MAPK8IP3Q9UPT6 1336 aa20.97■□□□□ 0.95
ERCC1-201ENST00000013807 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
ERCC1-201ENST00000013807 TAOK3Q9H2K8 898 aa20.96■□□□□ 0.95
ERCC1-201ENST00000013807 POTECB2RU33 542 aa20.95■□□□□ 0.94
ERCC1-201ENST00000013807 DPY19L2Q6NUT2 758 aa20.95■□□□□ 0.94
ERCC1-201ENST00000013807 SMC1BQ8NDV3 1235 aa20.95■□□□□ 0.94
ERCC1-201ENST00000013807 MAP3K15Q6ZN16 1313 aa20.95■□□□□ 0.94
ERCC1-201ENST00000013807 ERFEQ4G0M1 354 aa20.94■□□□□ 0.94
ERCC1-201ENST00000013807 RIC1Q4ADV7 1423 aa20.94■□□□□ 0.94
ERCC1-201ENST00000013807 IBTKQ9P2D0 1353 aaPredicted RBP20.93■□□□□ 0.94
ERCC1-201ENST00000013807 SCN4AP35499 1836 aa20.92■□□□□ 0.94
ERCC1-201ENST00000013807 RIPK4P57078 832 aa20.92■□□□□ 0.94
ERCC1-201ENST00000013807 CRY2Q49AN0 593 aa20.92■□□□□ 0.94
ERCC1-201ENST00000013807 NYXQ9GZU5 481 aa20.92■□□□□ 0.94
ERCC1-201ENST00000013807 ZNF219Q9P2Y4 722 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-201ENST00000013807 ALDH1B1P30837 517 aa20.91■□□□□ 0.94
ERCC1-201ENST00000013807 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
ERCC1-201ENST00000013807 LRP10Q7Z4F1 713 aa20.91■□□□□ 0.94
ERCC1-201ENST00000013807 RRP7AQ9Y3A4 280 aaKnown RBP20.91■□□□□ 0.94
ERCC1-201ENST00000013807 MYBBP1AQ9BQG0 1328 aaKnown RBP20.9■□□□□ 0.94
ERCC1-201ENST00000013807 CCDC93Q567U6 631 aa20.9■□□□□ 0.94
ERCC1-201ENST00000013807 TTLL7Q6ZT98 887 aa20.9■□□□□ 0.94
ERCC1-201ENST00000013807 ZNF34Q8IZ26 560 aa20.9■□□□□ 0.94
ERCC1-201ENST00000013807 SNED1Q8TER0 1413 aa20.89■□□□□ 0.94
ERCC1-201ENST00000013807 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
ERCC1-201ENST00000013807 PDIA6Q15084 440 aa20.89■□□□□ 0.93
ERCC1-201ENST00000013807 GIGYF2Q6Y7W6 1299 aaKnown RBP20.89■□□□□ 0.93
ERCC1-201ENST00000013807 KIF6Q6ZMV9 814 aa20.89■□□□□ 0.93
ERCC1-201ENST00000013807 TSPYL4Q9UJ04 414 aa20.89■□□□□ 0.93
ERCC1-201ENST00000013807 PCNTO95613 3336 aa20.89■□□□□ 0.93
ERCC1-201ENST00000013807 HOXA10P31260 410 aaPredicted RBP20.88■□□□□ 0.93
ERCC1-201ENST00000013807 FKBP4Q02790 459 aaKnown RBP eCLIP20.88■□□□□ 0.93
ERCC1-201ENST00000013807 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
ERCC1-201ENST00000013807 RTKN2Q8IZC4 609 aa20.88■□□□□ 0.93
ERCC1-201ENST00000013807 JMYQ8N9B5 988 aa20.88■□□□□ 0.93
ERCC1-201ENST00000013807 ANKRD36CQ5JPF3 1778 aa20.87■□□□□ 0.93
ERCC1-201ENST00000013807 MYL6BP14649 208 aa20.87■□□□□ 0.93
ERCC1-201ENST00000013807 GTF2E1P29083 439 aaPredicted RBP20.87■□□□□ 0.93
ERCC1-201ENST00000013807 NGEFQ8N5V2 710 aa20.87■□□□□ 0.93
ERCC1-201ENST00000013807 KLRG1Q96E93 195 aa20.87■□□□□ 0.93
ERCC1-201ENST00000013807 ABCC12Q96J65 1359 aa20.86■□□□□ 0.93
ERCC1-201ENST00000013807 UBN2Q6ZU65 1347 aa20.86■□□□□ 0.93
ERCC1-201ENST00000013807 IFFO2Q5TF58 517 aa20.86■□□□□ 0.93
ERCC1-201ENST00000013807 L3MBTL3Q96JM7 780 aaPredicted RBP20.86■□□□□ 0.93
ERCC1-201ENST00000013807 FAM177BA6PVY3 158 aa20.85■□□□□ 0.93
ERCC1-201ENST00000013807 CC2D2BQ6DHV5 1058 aa20.85■□□□□ 0.93
ERCC1-201ENST00000013807 CHL1O00533 1208 aa20.84■□□□□ 0.93
ERCC1-201ENST00000013807 DDNO94850 711 aaPredicted RBP20.84■□□□□ 0.93
ERCC1-201ENST00000013807 SUSD4Q5VX71 490 aa20.84■□□□□ 0.93
ERCC1-201ENST00000013807 NUTM1Q86Y26 1132 aa20.84■□□□□ 0.93
ERCC1-201ENST00000013807 PSMD1Q99460 953 aa20.84■□□□□ 0.93
ERCC1-201ENST00000013807 ZBTB3Q9H5J0 574 aa20.84■□□□□ 0.93
ERCC1-201ENST00000013807 NTSR2O95665 410 aa20.83■□□□□ 0.93
ERCC1-201ENST00000013807 HTRA3P83110 453 aa20.83■□□□□ 0.93
ERCC1-201ENST00000013807 GRIPAP1Q4V328 841 aa20.83■□□□□ 0.93
ERCC1-201ENST00000013807 PARP10Q53GL7 1025 aa20.83■□□□□ 0.93
ERCC1-201ENST00000013807 RUNDC1Q96C34 613 aa20.83■□□□□ 0.93
ERCC1-201ENST00000013807 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
ERCC1-201ENST00000013807 PPP1R42Q7Z4L9 355 aa20.82■□□□□ 0.92
ERCC1-201ENST00000013807 CRAMP1Q96RY5 1269 aa20.82■□□□□ 0.92
ERCC1-201ENST00000013807 TRIM35Q9UPQ4 493 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms