RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Ubxn2bQ0KL01 331 aa10.55□□□□□ -0.72
Trim39-205ENSMUST00000173369 GptQ8QZR5 496 aa10.55□□□□□ -0.72
Trim39-205ENSMUST00000173369 Samd1D3YXK1 519 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Znf428Q8C1M2 176 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Ltb4r2Q9JJL9 360 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Mapk8ip1Q9WVI9 707 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Pde4bB1AWC9 736 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Stox1B2RQL2 990 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Soga3Q6NZL0 945 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Ankle2Q6P1H6 964 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Maco1Q7TQE6 664 aaKnown RBP10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Trim52Q8CDV4 233 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Dbndd1Q9CZ00 160 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Dlg5E9Q9R9 1921 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Ccdc171E9Q1U1 1324 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Igf2rQ07113 2483 aaKnown RBP10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 PnnO35691 725 aaKnown RBP10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 NppbP40753 121 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Tspyl2Q7TQI8 677 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Ttc19Q8CC21 365 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Lmbr1lQ9D1E5 489 aa10.54□□□□□ -0.72
Trim39-205ENSMUST00000173369 Adcy9P51830 1353 aa10.53□□□□□ -0.72
Trim39-205ENSMUST00000173369 4933416C03RikQ3V063 378 aa10.53□□□□□ -0.72
Trim39-205ENSMUST00000173369 Fkbp5Q64378 456 aa10.53□□□□□ -0.72
Trim39-205ENSMUST00000173369 Echdc1Q9D9V3 322 aa10.53□□□□□ -0.72
Trim39-205ENSMUST00000173369 Kcnh8P59111 1102 aa10.53□□□□□ -0.72
Trim39-205ENSMUST00000173369 Snai1Q02085 264 aa10.53□□□□□ -0.72
Trim39-205ENSMUST00000173369 MypnQ5DTJ9 1315 aa10.52□□□□□ -0.72
Trim39-205ENSMUST00000173369 VeztQ3ZK22 780 aa10.52□□□□□ -0.72
Trim39-205ENSMUST00000173369 Zbtb40Q6PCS8 1258 aa10.52□□□□□ -0.72
Trim39-205ENSMUST00000173369 Rbm5Q91YE7 815 aaKnown RBP10.52□□□□□ -0.72
Trim39-205ENSMUST00000173369 Trim34aQ99PP6 485 aa10.52□□□□□ -0.72
Trim39-205ENSMUST00000173369 Myd88P22366 296 aa10.52□□□□□ -0.73
Trim39-205ENSMUST00000173369 Trpc5Q9QX29 975 aa10.52□□□□□ -0.73
Trim39-205ENSMUST00000173369 Rad23bP54728 416 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 Znf326O88291 580 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 Susd4Q8BH32 490 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 Q8C6G1 249 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 Armcx1Q9CX83 456 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 NeflP08551 543 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 Zc3h12cQ5DTV4 884 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 MarsQ68FL6 902 aaKnown RBP10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 Popdc2Q9ES82 367 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 Tnnt3Q9QZ47 272 aa10.51□□□□□ -0.73
Trim39-205ENSMUST00000173369 Gnl3lQ6PGG6 577 aaKnown RBP10.5□□□□□ -0.73
Trim39-205ENSMUST00000173369 Ythdc1E9Q5K9 736 aaKnown RBP10.5□□□□□ -0.73
Trim39-205ENSMUST00000173369 Eva1cP58659 440 aa10.5□□□□□ -0.73
Trim39-205ENSMUST00000173369 Tlr7P58681 1050 aa10.5□□□□□ -0.73
Trim39-205ENSMUST00000173369 Ppm1mQ8BU27 406 aa10.5□□□□□ -0.73
Trim39-205ENSMUST00000173369 Aldh1l1Q8R0Y6 902 aa10.5□□□□□ -0.73
Trim39-205ENSMUST00000173369 AtrnQ9WU60 1428 aa10.5□□□□□ -0.73
Trim39-205ENSMUST00000173369 Usp21Q9QZL6 566 aa10.49□□□□□ -0.73
Trim39-205ENSMUST00000173369 Flt4P35917 1363 aa10.49□□□□□ -0.73
Trim39-205ENSMUST00000173369 En2P09066 324 aa10.49□□□□□ -0.73
Trim39-205ENSMUST00000173369 Igsf3Q6ZQA6 1194 aa10.49□□□□□ -0.73
Trim39-205ENSMUST00000173369 Dnttip2Q8R2M2 758 aaKnown RBP10.49□□□□□ -0.73
Trim39-205ENSMUST00000173369 Ssc5dQ8BV57 1371 aa10.48□□□□□ -0.73
Trim39-205ENSMUST00000173369 Cyp7a1Q64505 503 aa10.48□□□□□ -0.73
Trim39-205ENSMUST00000173369 Bend3Q6PAL0 825 aa10.48□□□□□ -0.73
Trim39-205ENSMUST00000173369 Slc51aQ8R000 340 aa10.48□□□□□ -0.73
Trim39-205ENSMUST00000173369 Kank1E9Q238 1360 aa10.48□□□□□ -0.73
Trim39-205ENSMUST00000173369 Triml2E9PW10 424 aa10.48□□□□□ -0.73
Trim39-205ENSMUST00000173369 Vgll3P85442 326 aa10.48□□□□□ -0.73
Trim39-205ENSMUST00000173369 Myo5bP21271 1818 aa10.48□□□□□ -0.73
Trim39-205ENSMUST00000173369 Cyp19a1P28649 503 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Hirip3Q8BLH7 601 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Col11a2Q64739 1736 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Ccdc27Q3V036 639 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Stard3nlQ9DCI3 235 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 VirmaA2AIV2 1811 aaKnown RBP10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Gja5Q01231 358 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Dok7Q18PE0 504 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Cyp2c67Q569X9 491 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 B4galnt4Q766D5 1034 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Cluap1Q8R3P7 413 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Cwc25Q9DBF7 416 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Ubn2Q80WC1 1314 aa10.47□□□□□ -0.73
Trim39-205ENSMUST00000173369 Zfyve9A2A8R0 1397 aa10.46□□□□□ -0.73
Trim39-205ENSMUST00000173369 AK157302I3ITR1 129 aa10.46□□□□□ -0.73
Trim39-205ENSMUST00000173369 EappQ5BU09 281 aa10.46□□□□□ -0.73
Trim39-205ENSMUST00000173369 Rbm33Q9CXK9 1231 aaKnown RBP10.46□□□□□ -0.73
Trim39-205ENSMUST00000173369 Isca1Q9D924 129 aa10.46□□□□□ -0.73
Trim39-205ENSMUST00000173369 Erbb4Q61527 1308 aa10.46□□□□□ -0.73
Trim39-205ENSMUST00000173369 Sned1Q70E20 1403 aa10.46□□□□□ -0.73
Trim39-205ENSMUST00000173369 Cops6O88545 324 aa10.46□□□□□ -0.74
Trim39-205ENSMUST00000173369 Trim58Q5NCC9 485 aa10.46□□□□□ -0.74
Trim39-205ENSMUST00000173369 Gimap8Q75N62 688 aa10.46□□□□□ -0.74
Trim39-205ENSMUST00000173369 Pdcl3Q8BVF2 240 aa10.46□□□□□ -0.74
Trim39-205ENSMUST00000173369 DmtnQ9WV69 405 aa10.46□□□□□ -0.74
Trim39-205ENSMUST00000173369 Anxa1P10107 346 aaKnown RBP10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Grm8P47743 908 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 ErfeQ6PGN1 340 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Ddx58Q6Q899 926 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 SowahdQ8BY98 327 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Magea1O89006 320 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Magea5O89009 320 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Wdhd1P59328 1117 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 GpkowQ56A08 488 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Slc4a10Q5DTL9 1118 aa10.45□□□□□ -0.74
Trim39-205ENSMUST00000173369 Cavin2Q63918 418 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms