RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Specc1lQ2KN98 1118 aaKnown RBP20.1■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Tbc1d2bQ3U0J8 965 aa20.1■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Spa17Q62252 149 aa20.1■□□□□ 0.81
Pcf11-201ENSMUST00000119954 4933428M09RikQ9D3X3 192 aa20.1■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Slc5a4bQ91ZP4 660 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Cdk19Q8BWD8 501 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Cdca8Q8BHX3 289 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Sept11Q8C1B7 431 aaKnown RBP20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Ppp1r42Q8R1Z4 357 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Bloc1s2Q9CWG9 143 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Cct2P80314 535 aaKnown RBP20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Kiaa1524Q8BWY9 907 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Mrpl44Q9CY73 333 aaKnown RBP20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Gm28510A0A087WP28 240 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Camk4P08414 469 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Fkbp5Q64378 456 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Zfp644E9QA22 1323 aa20.09■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Cbfa2t2O70374 594 aa20.08■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Rasal2E9PW37 1286 aa20.08■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Cplx4Q80WM3 160 aa20.08■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Ccdc170D3YXL0 722 aa20.08■□□□□ 0.81
Pcf11-201ENSMUST00000119954 Ranbp1P34022 203 aaKnown RBP20.08■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Opa1P58281 960 aa20.08■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Mum1Q6DID5 682 aa20.08■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Cd109Q8R422 1442 aa20.08■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Nbr1P97432 988 aa20.08■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Klc3Q91W40 508 aa20.08■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Setdb1O88974 1307 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tmx1Q8VBT0 278 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Krt23Q99PS0 422 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tex2Q6ZPJ0 1128 aaKnown RBP20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Taok3Q8BYC6 898 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Arfgap2Q99K28 520 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Dapk3O54784 448 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tbc1d9Q3UYK3 1264 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Phldb1Q6PDH0 1371 aaKnown RBP20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Mybbp1aQ7TPV4 1344 aaKnown RBP20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Bag3Q9JLV1 577 aaKnown RBP20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Syap1Q9D5V6 365 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Uchl5Q9WUP7 329 aa20.07■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Phlpp2Q8BXA7 1320 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Gm28919A0A087WP35 240 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Speer4aF8VPX6 267 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Prkar2bP31324 416 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Mxra7Q9CZH7 178 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Traf3ip1Q149C2 625 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Rfc1P35601 1131 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Top1Q04750 767 aaKnown RBP20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Eftud2O08810 971 aaKnown RBP20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Rnf41Q8BH75 317 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Naa25Q8BWZ3 972 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Fermt2Q8CIB5 680 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tpd52l2Q9CYZ2 220 aaKnown RBP20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tacc3Q9JJ11 631 aa20.06■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Dph6Q9CQ28 267 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 HnrnpmQ9D0E1 729 aaKnown RBP20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Sept14Q9DA97 430 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Kdm5dQ62240 1548 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Ltv1Q6NSQ7 470 aaKnown RBP20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Nek5Q7TSC3 627 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Syt10Q9R0N4 523 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 TmpoQ61033 693 aaKnown RBP20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Rbm19Q8R3C6 952 aaKnown RBP20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Six6os1Q9CTN5 574 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Map3k5O35099 1380 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Mkrn1Q9QXP6 481 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Klhl30Q8C3F7 581 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Cdan1Q8CC12 1239 aa20.05■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Rsph10bE9PYQ0 876 aa20.04■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Kiaa1211Q5PR69 1207 aa20.04■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Sec62Q8BU14 398 aaKnown RBP20.04■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Srgap1Q91Z69 1062 aa20.04■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tubb5P99024 444 aaKnown RBP20.04■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Map4k4P97820 1233 aaKnown RBP20.04■□□□□ 0.8
Pcf11-201ENSMUST00000119954 ZgpatQ8VDM1 511 aa20.04■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tbc1d8Q9Z1A9 1134 aa20.04■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Snx13Q6PHS6 957 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 NpcdF8VQB8 469 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Syt1P46096 421 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 IbtkQ6ZPR6 1352 aaKnown RBP20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Cecr2E9Q2Z1 1453 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Ift88Q61371 824 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Atf7Q8R0S1 413 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Rab3il1Q8VDV3 383 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Usp11Q99K46 921 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Cul5Q9D5V5 780 aa20.03■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Elp1Q7TT37 1333 aaKnown RBP20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Bicd1Q8BR07 835 aa20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tnip1Q9WUU8 647 aa20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Apol7aB2RT54 418 aa20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Cep19Q9CQA8 163 aa20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Bcar3Q9QZK2 820 aa20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Krt15Q61414 452 aa20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Lrsam1Q80ZI6 727 aa20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Fam114a1Q9D281 569 aa20.02■□□□□ 0.8
Pcf11-201ENSMUST00000119954 Tnnc1P19123 161 aa20.02■□□□□ 0.79
Pcf11-201ENSMUST00000119954 Ankrd40Q5SUE8 363 aa20.02■□□□□ 0.79
Pcf11-201ENSMUST00000119954 Ccdc38Q8CDN8 563 aa20.02■□□□□ 0.79
Pcf11-201ENSMUST00000119954 Ssrp1Q08943 708 aaKnown RBP20.01■□□□□ 0.79
Pcf11-201ENSMUST00000119954 Gas8Q60779 478 aa20.01■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms