RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Brpf3B2KF05 1204 aaKnown RBP16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Prune1Q8BIW1 454 aa16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Emilin2Q8K482 1074 aa16.62■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Lrp6O88572 1613 aa16.61■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Sirt1Q923E4 737 aa16.61■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Creld2Q9CYA0 350 aa16.61■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Vps33aQ9D2N9 598 aa16.61■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Zscan29E9Q5B4 869 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Hsp90b1P08113 802 aaKnown RBP16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Gtpbp6Q3U6U5 514 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Zfp397Q7TNK4 527 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Dmrt2Q8BG36 561 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Nup88Q8CEC0 753 aaKnown RBP16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Wdr24Q8CFJ9 790 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Hmgn5Q9JL35 406 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Nphp1Q9QY53 687 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Pmfbp1Q9WVQ0 1022 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 NktrP30415 1453 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Brpf1B2RRD7 1212 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Hmox1P14901 289 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Mcm3P25206 812 aaKnown RBP16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Snx13Q6PHS6 957 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Naa30Q8CES0 364 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Ulbp1Q8HWA3 334 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Cabp2Q9JLK4 216 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Igbp1bQ9QZ29 343 aa16.6■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Wdr33Q8K4P0 1330 aaKnown RBP16.59■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Map7d2A2AG50 781 aa16.59■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Ddx17Q501J6 650 aaKnown RBP16.59■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Slx4ipQ9D7Y9 413 aa16.59■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Kcnj4P52189 445 aa16.58■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Cdk19Q8BWD8 501 aa16.58■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Bmp2kQ91Z96 1138 aa16.58■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 CenpqQ9CPQ5 267 aa16.58■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 4930548H24RikQ9D496 437 aa16.58■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Chmp4cQ9D7F7 232 aa16.58■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Spata31d1bE9QA57 1361 aa16.58■□□□□ 0.25
Hoxc4-201ENSMUST00000100164 Zfp804bA0A0G2JGH6 1343 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Abca14E9Q8F8 1683 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Uhrf1bp1lA2RSJ4 1457 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Card6E9PWH2 1175 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Idi1P58044 227 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 CalcaP70160 136 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 MpndQ3TV65 487 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Nol12Q8BG17 217 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Klhdc4Q921I2 584 aa16.58■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Atp10bB1AWN4 1474 aa16.57■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Jakmip1Q8BVL9 626 aa16.57■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Rsph6aQ8CDR2 708 aa16.57■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Smc3Q9CW03 1217 aaKnown RBP16.57■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Gnai2P08752 355 aaKnown RBP16.57■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Kif2aP28740 705 aa16.57■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Tshz3Q8CGV9 1081 aa16.57■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 DpydQ8CHR6 1025 aa16.57■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 1700006A11RikB9EHI3 544 aa16.56■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Mmp8O70138 465 aa16.56■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Cadps2Q8BYR5 1297 aa16.56■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Otud6bQ8K2H2 294 aa16.56■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Nlrp3Q8R4B8 1033 aa16.56■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Senp3Q9EP97 568 aaKnown RBP16.55■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Rad50P70388 1312 aa16.55■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Arhgef1Q61210 920 aaKnown RBP16.55■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Lrrc59Q922Q8 307 aaKnown RBP16.55■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Zfp597E9Q6S0 419 aa16.54■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Trap1aP19473 224 aa16.54■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Syt1P46096 421 aa16.54■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Ccz1Q8C1Y8 480 aa16.54■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Rufy3Q9D394 469 aa16.54■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Sytl4Q9R0Q1 673 aa16.54■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Hmx1O70218 332 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Cd22P35329 862 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Tyro3P55144 880 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Atp8b2P98199 1209 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Gjb2Q00977 226 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Srgap3Q812A2 1099 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Ppp1r42Q8R1Z4 357 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Wdr17E9Q271 1322 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Nphp3Q7TNH6 1325 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 CemipQ8BI06 1361 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Kansl3A2RSY1 903 aaKnown RBP16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Dixdc1Q80Y83 711 aa16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 AatfQ9JKX4 526 aaKnown RBP16.53■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Tet3Q8BG87 1668 aa16.52■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Mcmdc2E9Q956 681 aa16.52■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Sox12Q04890 314 aa16.52■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Nfe2l3Q9WTM4 660 aa16.52■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Mrvi1Q9WUX5 899 aaKnown RBP16.52■□□□□ 0.24
Hoxc4-201ENSMUST00000100164 Atp8b3Q6UQ17 1335 aa16.52■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Hoxb7P09024 217 aa16.51■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Mcm10Q0VBD2 885 aa16.51■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Tlcd1Q99JT6 247 aa16.51■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 NaspQ99MD9 773 aaKnown RBP16.51■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Cep135Q6P5D4 1140 aa16.51■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Add2Q9QYB8 725 aa16.51■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Stk36Q69ZM6 1316 aa16.51■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Birc3O08863 600 aa16.5■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Pof1bQ8K4L4 587 aa16.5■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Stk31Q99MW1 1018 aa16.5■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 Map3k19E9Q3S4 1311 aa16.5■□□□□ 0.23
Hoxc4-201ENSMUST00000100164 EappQ5BU09 281 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms