RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 ZNF347Q96SE7 839 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 LRRC61Q9BV99 259 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 ABCG4Q9H172 646 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 CLK4Q9HAZ1 481 aaKnown RBP9.42□□□□□ -0.9
PTPN2-210ENST00000591115 SEMA3GQ9NS98 782 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 APOBEC3BQ9UH17 382 aaKnown RBP9.42□□□□□ -0.9
PTPN2-210ENST00000591115 PILRAQ9UKJ1 303 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 ACSL6Q9UKU0 697 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 PSME2Q9UL46 239 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 MAP4K5Q9Y4K4 846 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 PCDHGB5Q9Y5G0 923 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 SNX8Q9Y5X2 465 aa9.42□□□□□ -0.9
PTPN2-210ENST00000591115 GOLGA4Q13439 2230 aaKnown RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ZFHX2Q9C0A1 2572 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 TRBV23OR9-2A0A075B6M9 112 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 A0A0G2JN53 185 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 A0A0J9YY10 115 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 SMIM31A0A1B0GVY4 71 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 A0A1W2PR48 441 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 GSAPA4D1B5 854 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 TRIM64A6NGJ6 449 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 TMEM229AB2RXF0 380 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 C4orf51C9J302 202 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 PLOD2O00469 737 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 PROM1O43490 865 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 SDC3O75056 442 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 PDE9AO76083 593 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 PABPC4LP0CB38 370 aaKnown RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 HOXB3P14651 431 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ITGA2P17301 1181 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 JUNDP17535 347 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 POLR2CP19387 275 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 MAGP20916 626 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 CTSKP43235 329 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 CCT3P49368 545 aaKnown RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 RPS6KA3P51812 740 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 VLDLRP98155 873 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 IL18R1Q13478 541 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 CEBPEQ15744 281 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 SPDYE7PQ495Y7 208 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 LIN52Q52LA3 116 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 IFI44LQ53G44 452 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 FCRL6Q6DN72 434 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 REEP3Q6NUK4 255 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 SLC48A1Q6P1K1 146 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 CEACAM20Q6UY09 585 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 TMEM26Q6ZUK4 368 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 C6orf120Q7Z4R8 191 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 VTCN1Q7Z7D3 282 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ARMC8Q8IUR7 673 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ARL10Q8N8L6 244 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 OR2I1PQ8NGU4 316 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 OR5AK3PQ8NH89 298 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 NFKBIDQ8NI38 313 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 BAHD1Q8TBE0 780 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 BBS4Q96RK4 519 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 SERINC2Q96SA4 455 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ZFYVE21Q9BQ24 234 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ARRDC1-AS1Q9H2J1 176 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 GLIPR2Q9H4G4 154 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 CXorf56Q9H5V9 222 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 UCK1Q9HA47 277 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 THSD1Q9NS62 852 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 GIMAP4Q9NUV9 329 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 TUBA8Q9NY65 449 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 PHF11Q9UIL8 331 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 CES1P1Q9UKY3 287 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 RAB23Q9ULC3 237 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ABCG2Q9UNQ0 655 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ENTPD4Q9Y227 616 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 KLHL20Q9Y2M5 609 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ATG4BQ9Y4P1 393 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ORC6Q9Y5N6 252 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 NUP214P35658 2090 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 ARID1BQ8NFD5 2236 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-210ENST00000591115 DMXL1Q9Y485 3027 aa9.41□□□□□ -0.9
PTPN2-210ENST00000591115 TRIM64CA6NLI5 447 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 ZSCAN9O15535 394 aaPredicted RBP9.4□□□□□ -0.9
PTPN2-210ENST00000591115 AIFM1O95831 613 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 CSF2P04141 144 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 TFAP2AP05549 437 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 GNAO1P09471 354 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 CSNK2A2P19784 350 aaPredicted RBP9.4□□□□□ -0.9
PTPN2-210ENST00000591115 CERS1P27544 350 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 MPIP34949 423 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 HOXD12P35452 270 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 CDK9P50750 372 aaKnown RBP9.4□□□□□ -0.9
PTPN2-210ENST00000591115 IST1P53990 364 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 NR1H2P55055 460 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 HSPB3Q12988 150 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 C1orf61Q13536 156 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 ELOCQ15369 112 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 TRIM61Q5EBN2 209 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 TTC33Q6PID6 262 aaPredicted RBP9.4□□□□□ -0.9
PTPN2-210ENST00000591115 RNF44Q7L0R7 432 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 ABHD13Q7L211 337 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 OOSP2Q86WS3 158 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 SDR16C5Q8N3Y7 309 aa9.4□□□□□ -0.9
PTPN2-210ENST00000591115 ZNF655Q8N720 491 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms