RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 AGPAT4Q9NRZ5 378 aa10.3□□□□□ -0.76
DDB1-222ENST00000543627 LRFN1Q9P244 771 aa10.3□□□□□ -0.76
DDB1-222ENST00000543627 ERVK-11Q9UQG0 969 aa10.3□□□□□ -0.76
DDB1-222ENST00000543627 PCDHGA10Q9Y5H3 936 aa10.3□□□□□ -0.76
DDB1-222ENST00000543627 CLDN16Q9Y5I7 305 aa10.3□□□□□ -0.76
DDB1-222ENST00000543627 CNTRLQ7Z7A1 2325 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 A0A1W2PS29 197 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 TCP11X1B4DZS4 312 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 HRKO00198 91 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 PRAMEF2O60811 474 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 ITGA10O75578 1167 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 RASAL1O95294 804 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 CHEK2O96017 543 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 HSD3B1P14060 373 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 CD46P15529 392 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 HSD3B2P26439 372 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 PTGER1P34995 402 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 FEN1P39748 380 aaKnown RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 CYB561P49447 251 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 MLF1P58340 268 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 NAA20P61599 178 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 ERVK-8P63133 956 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 PMP22Q01453 160 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 GALNT1Q10472 559 aaPredicted RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 TBL3Q12788 808 aaKnown RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 CSTF3Q12996 717 aaKnown RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 MRPL49Q13405 166 aaKnown RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 EIF2S3LQ2VIR3 472 aaKnown RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 ZNF468Q5VIY5 522 aaPredicted RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 OR52E8Q6IFG1 317 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 MRM1Q6IN84 353 aaKnown RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 H3F3CQ6NXT2 135 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 IL20RBQ6UXL0 311 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 EXOC3L1Q86VI1 746 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 NUDCD3Q8IVD9 361 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 DDIASQ8IXT1 998 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 HORMAD2Q8N7B1 307 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 GBP7Q8N8V2 638 aaPredicted RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 ANKRD42Q8N9B4 389 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 APCDD1LQ8NCL9 501 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 MORN4Q8NDC4 146 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 GRHL3Q8TE85 626 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 CHTF18Q8WVB6 975 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 TMEM125Q96AQ2 219 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 TM4SF18Q96CE8 201 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 SENP5Q96HI0 755 aaPredicted RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 PKNOX2Q96KN3 472 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 GAL3ST4Q96RP7 486 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 TMEM109Q9BVC6 243 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 FAIM2Q9BWQ8 316 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 BRINP2Q9C0B6 783 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 TNFRSF12AQ9NP84 129 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 ZNF223Q9UK11 482 aaPredicted RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 ADAM29Q9UKF5 820 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 ERVK-19Q9WJR5 959 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 NTNG1Q9Y2I2 539 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 POLR3HQ9Y535 204 aaPredicted RBP10.29□□□□□ -0.76
DDB1-222ENST00000543627 ZNF780BQ9Y6R6 833 aa10.29□□□□□ -0.76
DDB1-222ENST00000543627 GOLGA6L10A6NI86 522 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 AZIN1O14977 448 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 SEC22BO75396 215 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 OR2J2O76002 312 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 CHRNGP07510 517 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 IL3P08700 152 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 ANXA4P09525 319 aaPredicted RBP10.28□□□□□ -0.76
DDB1-222ENST00000543627 LINC00032P0C843 101 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 UROSP10746 265 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 SSR4P51571 173 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 C2orf80Q0P641 193 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 SPIN4Q56A73 249 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 ARL13AQ5H913 290 aaPredicted RBP10.28□□□□□ -0.76
DDB1-222ENST00000543627 SH2D4BQ5SQS7 431 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 SLC25A25Q6KCM7 469 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 GALNTL5Q7Z4T8 443 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 ST13P4Q8IZP2 240 aaPredicted RBP10.28□□□□□ -0.76
DDB1-222ENST00000543627 MGARPQ8TDB4 240 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 ASB15Q8WXK1 588 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 EXOSC8Q96B26 276 aaKnown RBP10.28□□□□□ -0.76
DDB1-222ENST00000543627 KLHL29Q96CT2 875 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 EML4Q9HC35 981 aaKnown RBP10.28□□□□□ -0.76
DDB1-222ENST00000543627 RRAGDQ9NQL2 400 aaPredicted RBP10.28□□□□□ -0.76
DDB1-222ENST00000543627 MKS1Q9NXB0 559 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 SENP1Q9P0U3 644 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 BCAP29Q9UHQ4 241 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 PSME2Q9UL46 239 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 PPT2Q9UMR5 302 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 DLGAP4Q9Y2H0 992 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 PCDHA9Q9Y5H5 950 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 PTGDR2Q9Y5Y4 395 aa10.28□□□□□ -0.76
DDB1-222ENST00000543627 C1orf226A1L170 272 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 SYNDIG1LA6NDD5 238 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 A8MVJ9 347 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 TMEM233B4DJY2 109 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 H3BQF6 201 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 SLC28A1O00337 649 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 RGS14O43566 566 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 DDAH2O95865 285 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 BPGMP07738 259 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 SP1P08047 785 aa10.27□□□□□ -0.77
DDB1-222ENST00000543627 PORP16435 677 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms