RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PRAMEF2O60811 474 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 GUCY1B2O75343 617 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 VPS4BO75351 444 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 ITGA10O75578 1167 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 GPR75O95800 540 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 CHRNGP07510 517 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 UROSP10746 265 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 PIK3R1P27986 724 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 SERPINB3P29508 390 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 ETV4P43268 484 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 UQCRFS1P47985 274 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 ERVK-8P63133 956 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 RAE1P78406 368 aaKnown RBP12□□□□□ -0.49
COL5A1-206ENST00000465877 OC90Q02509 493 aaPredicted RBP12□□□□□ -0.49
COL5A1-206ENST00000465877 OR1C1Q15619 314 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 TNFAIP8L3Q5GJ75 292 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 ZNF766Q5HY98 468 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 RPUSD3Q6P087 351 aaKnown RBP12□□□□□ -0.49
COL5A1-206ENST00000465877 FAM180AQ6UWF9 173 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 LRIG3Q6UXM1 1119 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 HSDL2Q6YN16 418 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 GALNT11Q8NCW6 608 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 MDS2Q8NDY4 140 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 ZNF721Q8TF20 911 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 CHTF18Q8WVB6 975 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 SREK1Q8WXA9 508 aaKnown RBP12□□□□□ -0.49
COL5A1-206ENST00000465877 PPWD1Q96BP3 646 aaKnown RBP12□□□□□ -0.49
COL5A1-206ENST00000465877 ZBTB9Q96C00 473 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 C11orf24Q96F05 449 aaPredicted RBP12□□□□□ -0.49
COL5A1-206ENST00000465877 APIPQ96GX9 242 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 FBXL20Q96IG2 436 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 PKNOX2Q96KN3 472 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 CLMPQ9H6B4 373 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 SSU72Q9NP77 194 aaKnown RBP12□□□□□ -0.49
COL5A1-206ENST00000465877 VPS4AQ9UN37 437 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 ERVK-19Q9WJR5 959 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 FIS1Q9Y3D6 152 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 PCDHA9Q9Y5H5 950 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 COPG1Q9Y678 874 aaKnown RBP12□□□□□ -0.49
COL5A1-206ENST00000465877 LRRK2Q5S007 2527 aa12□□□□□ -0.49
COL5A1-206ENST00000465877 USP9XQ93008 2570 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-206ENST00000465877 GNG14A0A1W2PPG7 69 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 WASHC1A8K0Z3 465 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 HRKO00198 91 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 CDK2AP1O14519 115 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 AZIN1O14977 448 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 PGRMC2O15173 223 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 RSL1D1O76021 490 aaKnown RBP11.99□□□□□ -0.49
COL5A1-206ENST00000465877 NEURL1O76050 574 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 ZFAND5O76080 213 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 IGKV3-11P04433 115 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 BPGMP07738 259 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 IL3P08700 152 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 MYZAPP0CAP1 466 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 TRHRP34981 398 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-206ENST00000465877 CD96P40200 585 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 HK2P52789 917 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 TRA2BP62995 288 aaKnown RBP11.99□□□□□ -0.49
COL5A1-206ENST00000465877 PMP22Q01453 160 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 KCNC4Q03721 635 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 NR6A1Q15406 480 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 SPDYAQ5MJ70 313 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 BEND6Q5SZJ8 279 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-206ENST00000465877 ZNF468Q5VIY5 522 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-206ENST00000465877 KANK2Q63ZY3 851 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 SLC48A1Q6P1K1 146 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 GALNT18Q6P9A2 607 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 EXOC3L1Q86VI1 746 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 C9orf40Q8IXQ3 194 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 GRHL3Q8TE85 626 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 TM4SF18Q96CE8 201 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 KLHL29Q96CT2 875 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 PGM2Q96G03 612 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 SCMH1Q96GD3 660 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 RBM18Q96H35 190 aaKnown RBP11.99□□□□□ -0.49
COL5A1-206ENST00000465877 C5orf34Q96MH7 638 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 BARD1Q99728 777 aaKnown RBP11.99□□□□□ -0.49
COL5A1-206ENST00000465877 CNPPD1Q9BV87 410 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 FAIM2Q9BWQ8 316 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 EBPLQ9BY08 206 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 HES7Q9BYE0 225 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 AGPAT4Q9NRZ5 378 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 LRFN1Q9P244 771 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 PTGDR2Q9Y5Y4 395 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 ACTL7BQ9Y614 415 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 SVILO95425 2214 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 HIVEP3Q5T1R4 2406 aa11.99□□□□□ -0.49
COL5A1-206ENST00000465877 ASH1LQ9NR48 2969 aaKnown RBP11.98□□□□□ -0.49
COL5A1-206ENST00000465877 GOLGA6L10A6NI86 522 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 TMEM200CA6NKL6 621 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 TMEM233B4DJY2 109 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 TCP11X1B4DZS4 312 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 TM9SF1O15321 606 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 CTIFO43310 598 aaKnown RBP11.98□□□□□ -0.49
COL5A1-206ENST00000465877 SLC25A12O75746 678 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 OR2J2O76002 312 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 SLC35E2P0CK97 266 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 CPMP14384 443 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 CD46P15529 392 aa11.98□□□□□ -0.49
COL5A1-206ENST00000465877 GNLYP22749 145 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms