RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Zhx3Q8C0Q2 951 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 Sirt4Q8R216 333 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ptgr2Q8VDQ1 351 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 Man2c1Q91W89 1039 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 Sugt1Q9CX34 336 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 Q9CXL3 195 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fbxl20Q9CZV8 436 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 HhatlQ9D1G3 503 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 9230112D13RikQ9D260 137 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 Dclk1Q9JLM8 756 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 Hspb3Q9QZ57 154 aa14.08□□□□□ -0.16
Nup88-202ENSMUST00000108530 PtprsB0V2N1 1907 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Igkv15-103A0A140T8P3 115 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Zfp600A2A7V0 737 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ap1arE9PYF7 298 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm5145F8VQ88 278 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Hax1O35387 280 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Slc22a8O88909 537 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ntrk2P15209 821 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Faf1P54731 649 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 IgfalsP70389 603 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cdh12Q5RJH3 794 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Olfr1364Q5SZS9 314 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 D11Wsu47eQ6PIX9 558 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Hmbox1Q8BJA3 419 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 GmppbQ8BTZ7 360 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 PigtQ8BXQ2 582 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Q8C3I9 435 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Olfr677Q8VF06 312 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gorasp1Q91X51 446 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Kdelr2Q9CQM2 212 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 2310003L06RikQ9CV82 495 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Hspa12bQ9CZJ2 685 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Acbd7Q9D258 88 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Q9DAR0 182 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ninj2Q9JL89 143 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Socs6Q9JLY0 533 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mad2l1Q9Z1B5 205 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cd320Q9Z1P5 260 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm13420A0A140LJJ2 248 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm17175E9Q528 179 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 EmdO08579 259 aaKnown RBP14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mtnd2P03893 345 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mtnd3P03899 115 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Dlx5P70396 289 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Defb43Q30KM9 69 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Kcnk6Q3TBV4 313 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Slc30a10Q3UVU3 470 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Clhc1Q5M6W3 596 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mrm3Q5ND52 418 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Taar2Q5QD17 339 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Vsx2Q61412 361 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Olfr503Q7TRU8 323 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fam181bQ80VF6 417 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 FntbQ8K2I1 437 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Wfikkn1Q8R0S6 552 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cd209eQ91ZW7 208 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Psat1Q99K85 370 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Chaf1bQ9D0N7 572 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 5530401A14RikQ9D3H9 131 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gpn3Q9D3W4 284 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tex22Q9D9U4 189 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cmpk1Q9DBP5 196 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Rhox9Q9EQM5 227 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Kcnj10Q9JM63 379 aa14.07□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm29797A0A140LIA7 188 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Kif28pD3YXS5 1028 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Vmn2r50E9PW61 861 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Erich2E9Q1A6 463 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm19965J3QNY8 723 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tspan6O70401 245 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ugt2b17P17717 530 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Oprd1P32300 372 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Dlx2P40764 332 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ppp1caP62137 330 aaKnown RBP14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ypel5P62700 121 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Nhlh1Q02576 133 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tmem64Q3U145 381 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Muc19Q6JHY2 733 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Rps9Q6ZWN5 194 aaKnown RBP14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fam92aQ8BP22 355 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 TrhdeQ8K093 1025 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Tmem45bQ8VCZ2 278 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pcdh18Q8VHR0 1134 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ugt2b38Q91WH2 530 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Arrb2Q91YI4 410 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Mrm1Q99J25 320 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Nmd3Q99L48 503 aaKnown RBP14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Shmt2Q9CZN7 504 aaKnown RBP14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Dnase1l2Q9D1G0 278 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ttc25Q9D4B2 624 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Vmn1r52Q9EP79 309 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Ap3m1Q9JKC8 418 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Golga4Q91VW5 2238 aa14.06□□□□□ -0.16
Nup88-202ENSMUST00000108530 Pkd2l1A2A259 760 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Hs3st4D3YVV6 449 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Gm10324L7N208 604 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 H2-AaP01910 256 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Fgf14P70379 247 aa14.05□□□□□ -0.16
Nup88-202ENSMUST00000108530 Cds1P98191 461 aa14.05□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 88.5 ms